BDGP Sequence Production Resources |
Search the DGRC for RT08740
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 87 |
Well: | 40 |
Vector: | pCR2.1 |
Associated Gene/Transcript | CG32750-RA |
Protein status: | RT08740.pep: gold |
Sequenced Size: | 1572 |
1572 bp assembled on 2010-06-02
GenBank Submission: BT125050.1
> RT08740.complete ATGGCTGTATTCCTCCGTCGATTTCTCTGGCTCATCAGTTTTACTTTGGT TTTGACTGATGATAATTCCGTTGAGAATAAATTCTATATAGCTGGTGTAG TGGAATATAGGCCAACGTTTATGGGCGGCACTTCGGAACAGCTGTTGCAA GCGAATCTGGCTGGTTATCTGGAGATCATGGCATCTGGCAATGGCACTAC GGACATCATAGTCTTTCCGGAGGCCACACTAAATAGTGTGATTACCCTGA CAGCGGTGCCGAAATTTACGGAGCAAAGTTTGTGTGAAGAACAGGGAGAT GATGATCCGGAAATAGCACCATTCCTAAGATCTTTGGCCTGTGCCGCCAG GGAATATGGCACCTATTTGGTGGTCAATGTCAAGGAGCGTGTTTCGGAGC AGTGTACTTCGGATGAGACATGTTCCAGTCGTGGCTATTCGATTCACAAT ACCAACGTAGTGTTCGATAGACAAGGAGCGGTGATATCACGCTATAGGAA ATGGAATCTTTACTTAGAACCATCCACCAATCGGACTGAATCCCCTGAAA TAGCCACCTTTACAACGGATTTCAATGTGACCTTCGGTCATTTCATCTGC TTTGATATGCTCTTTTATACGCCGGCTCAGGATTTGGTGGAGCAACTGGG CATCCGCCATGTGATTGTCACCAAAATGTTCAACTCGGAGCTGCCTTTCC TCACAGCCTCTCAATTTCAGCAGGGCTGGGCGTGGGCCAATCGGGTGAAC CTTCTGGCCTCCGGAGGAAGTCTTCCGCAGGGTGGAATAAGTGGCAGTGG AATTTACGCGGGTCAACAGGGCGCTCTGGCGAGACTCATGATCACGGATG AGCTGGTGGGTCAGAGAAAGTTGCTCCTGGCTAAAGTTCCCCTCGATCCC GAGGAGCCGATAGCCACGGATGAGATCTTGGAACCCGAAATCATGACTCC TGTGAAACTAAAACTTCTGCAGCAACCGGAACTAAAGAACTTTACCACCT GGGAGTTGCCCATGGTCCGGGGCAGTTCGGTGGACAAGAGAATATGCCAG GAGGACTTGTGCTGCGAGTTCCGGGTCACTTGGACCCTGGAGGACACTCA ACCGGAATATAACTACCGATTGGGAGTTTGGGTGGGACAAAGGCGCTACG AGGAGGAGCAGTACAGTGCCATCCGGCTGTGTGGCCTGTTCGCCTGCAAA GGTGCCAGTGTAGAGAGCTGCGGCCTGGTTAGCGAGGAGGAGGTACACCT GCAGGATCACCGAGTTGTGTTCACCGACCTGCAGATCCTTGGCGAGTTTG TACGGAGGCCACGACGTCTCATATTGCCCAGCACCCTTAGCTCCTCCAGT TTCTATGCCCTGCAACCATCCCAATTAGCATGGTCCATGGAGGAATTGGC TAATGTAACGCGGATTAAGATGGAGCTGCGACAACCGCACAGCCAGCTAA TGACCTTCGCCATATATGGCAACTATTTCGATGAGTATGCAAATGGTGGA GCTGGAAGATTGGGAACCCTGCTGTTTCTCCTAATCACGCCGCTAATTAT GATGCATCTATTTCGGGAGTAG
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32750-RA | 1645 | CG32750-RA | 23..1594 | 1..1572 | 7845 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6086963..6087828 | 707..1572 | 100 | <- | Minus |
chrX | 6087887..6088592 | 1..706 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32750-RA | 1..1572 | 1..1572 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32750-RA | 1..1572 | 1..1572 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32750-RA | 1..1572 | 1..1572 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32750-RA | 1..1572 | 1..1572 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32750-RA | 1..1572 | 1..1572 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32750-RA | 1..1572 | 1..1572 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32750-RA | 23..1594 | 1..1572 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32750-RA | 23..1594 | 1..1572 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6194788..6195653 | 707..1572 | 100 | <- | Minus |
X | 6195712..6196417 | 1..706 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6194788..6195653 | 707..1572 | 100 | <- | Minus |
X | 6195712..6196417 | 1..706 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6194788..6195653 | 707..1572 | 100 | <- | Minus |
X | 6195712..6196417 | 1..706 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6088821..6089686 | 707..1572 | 100 | <- | Minus |
arm_X | 6089745..6090450 | 1..706 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 6202886..6203751 | 707..1572 | 100 | <- | Minus |
X | 6203810..6204515 | 1..706 | 99 | Minus |
Translation from 0 to 1571
> RT08740.pep MAVFLRRFLWLISFTLVLTDDNSVENKFYIAGVVEYRPTFMGGTSEQLLQ ANLAGYLEIMASGNGTTDIIVFPEATLNSVITLTAVPKFTEQSLCEEQGD DDPEIAPFLRSLACAAREYGTYLVVNVKERVSEQCTSDETCSSRGYSIHN TNVVFDRQGAVISRYRKWNLYLEPSTNRTESPEIATFTTDFNVTFGHFIC FDMLFYTPAQDLVEQLGIRHVIVTKMFNSELPFLTASQFQQGWAWANRVN LLASGGSLPQGGISGSGIYAGQQGALARLMITDELVGQRKLLLAKVPLDP EEPIATDEILEPEIMTPVKLKLLQQPELKNFTTWELPMVRGSSVDKRICQ EDLCCEFRVTWTLEDTQPEYNYRLGVWVGQRRYEEEQYSAIRLCGLFACK GASVESCGLVSEEEVHLQDHRVVFTDLQILGEFVRRPRRLILPSTLSSSS FYALQPSQLAWSMEELANVTRIKMELRQPHSQLMTFAIYGNYFDEYANGG AGRLGTLLFLLITPLIMMHLFRE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20309-PA | 523 | GF20309-PA | 5..489 | 8..499 | 1733 | 66.8 | Plus |
Dana\GF20308-PA | 555 | GF20308-PA | 27..517 | 24..502 | 830 | 38.9 | Plus |
Dana\GF20307-PA | 544 | GF20307-PA | 29..510 | 25..502 | 745 | 36.2 | Plus |
Dana\GF20306-PA | 560 | GF20306-PA | 9..513 | 9..495 | 637 | 35.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17692-PA | 524 | GG17692-PA | 1..524 | 1..523 | 2455 | 88.9 | Plus |
Dere\GG17690-PA | 556 | GG17690-PA | 28..554 | 24..522 | 844 | 39.1 | Plus |
Dere\GG17689-PA | 563 | GG17689-PA | 25..510 | 25..495 | 627 | 36.8 | Plus |
Dere\GG17691-PA | 171 | GG17691-PA | 29..88 | 175..235 | 167 | 54.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24840-PA | 544 | GH24840-PA | 27..497 | 27..495 | 1414 | 58.2 | Plus |
Dgri\GH24839-PA | 575 | GH24839-PA | 33..535 | 18..502 | 794 | 37.5 | Plus |
Dgri\GH24838-PA | 559 | GH24838-PA | 21..509 | 16..495 | 690 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32750-PA | 523 | CG32750-PA | 1..523 | 1..523 | 2720 | 100 | Plus |
vanin-like-PA | 558 | CG32754-PA | 29..519 | 25..502 | 832 | 40.7 | Plus |
CG32751-PA | 517 | CG32751-PA | 9..502 | 8..502 | 803 | 38.7 | Plus |
CG32751-PB | 525 | CG32751-PB | 9..510 | 8..502 | 784 | 38.2 | Plus |
Btnd-PA | 553 | CG3599-PA | 25..510 | 25..495 | 619 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16174-PA | 558 | GI16174-PA | 26..516 | 28..497 | 1389 | 55.5 | Plus |
Dmoj\GI16173-PA | 570 | GI16173-PA | 35..527 | 23..500 | 803 | 38.3 | Plus |
Dmoj\GI16171-PA | 570 | GI16171-PA | 39..529 | 28..502 | 795 | 38 | Plus |
Dmoj\GI16172-PA | 566 | GI16172-PA | 35..526 | 28..502 | 771 | 36.8 | Plus |
Dmoj\GI16170-PA | 543 | GI16170-PA | 22..501 | 23..495 | 665 | 36.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21362-PA | 523 | GL21362-PA | 24..518 | 25..516 | 1613 | 61.4 | Plus |
Dper\GL21361-PA | 552 | GL21361-PA | 29..518 | 24..502 | 847 | 42.9 | Plus |
Dper\GL21358-PA | 465 | GL21358-PA | 110..402 | 218..495 | 361 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23775-PA | 524 | GA23775-PA | 24..521 | 25..518 | 1623 | 61.6 | Plus |
Dpse\GA17117-PA | 552 | GA17117-PA | 29..518 | 24..502 | 850 | 43.1 | Plus |
Dpse\GA17549-PA | 592 | GA17549-PA | 18..529 | 1..495 | 678 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12591-PA | 523 | GM12591-PA | 1..523 | 1..523 | 2660 | 95 | Plus |
Dsec\GM12589-PA | 558 | GM12589-PA | 28..554 | 24..522 | 849 | 40.1 | Plus |
Dsec\GM12590-PA | 482 | GM12590-PA | 32..467 | 28..502 | 725 | 38.3 | Plus |
Dsec\GM12588-PA | 336 | GM12588-PA | 162..293 | 370..495 | 170 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16209-PA | 523 | GD16209-PA | 1..523 | 1..523 | 2668 | 95 | Plus |
Dsim\GD16207-PA | 558 | GD16207-PA | 28..554 | 24..522 | 852 | 39.9 | Plus |
Dsim\GD16208-PA | 516 | GD16208-PA | 32..501 | 28..502 | 832 | 40.4 | Plus |
Dsim\GD16205-PA | 553 | GD16205-PA | 25..510 | 25..495 | 654 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16664-PA | 540 | GJ16664-PA | 21..502 | 23..497 | 1434 | 56.8 | Plus |
Dvir\GJ16663-PA | 591 | GJ16663-PA | 58..550 | 24..502 | 825 | 40 | Plus |
Dvir\GJ16662-PA | 572 | GJ16662-PA | 1..515 | 1..495 | 695 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15373-PA | 592 | GK15373-PA | 4..489 | 8..495 | 1333 | 54.5 | Plus |
Dwil\GK15353-PA | 572 | GK15353-PA | 15..519 | 7..495 | 788 | 37.1 | Plus |
Dwil\GK17695-PA | 556 | GK17695-PA | 16..489 | 29..493 | 710 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16480-PA | 525 | GE16480-PA | 1..525 | 1..523 | 2405 | 87.2 | Plus |
Dyak\GE16478-PA | 556 | GE16478-PA | 29..554 | 25..522 | 838 | 40.2 | Plus |
Dyak\GE16479-PA | 516 | GE16479-PA | 9..501 | 8..502 | 819 | 38.9 | Plus |
Dyak\GE16477-PA | 553 | GE16477-PA | 25..510 | 25..495 | 634 | 36.8 | Plus |
Translation from 1 to 1571
> RT08740.hyp MAVFLRRFLWLISFTLVLTDDNSVENKFYIAGVVEYRPTFMGGTSEQLLQ ANLAGYLEIMASGNGTTDIIVFPEATLNSVITLTAVPKFTEQSLCEEQGD DDPEIAPFLRSLACAAREYGTYLVVNVKERVSEQCTSDETCSSRGYSIHN TNVVFDRQGAVISRYRKWNLYLEPSTNRTESPEIATFTTDFNVTFGHFIC FDMLFYTPAQDLVEQLGIRHVIVTKMFNSELPFLTASQFQQGWAWANRVN LLASGGSLPQGGISGSGIYAGQQGALARLMITDELVGQRKLLLAKVPLDP EEPIATDEILEPEIMTPVKLKLLQQPELKNFTTWELPMVRGSSVDKRICQ EDLCCEFRVTWTLEDTQPEYNYRLGVWVGQRRYEEEQYSAIRLCGLFACK GASVESCGLVSEEEVHLQDHRVVFTDLQILGEFVRRPRRLILPSTLSSSS FYALQPSQLAWSMEELANVTRIKMELRQPHSQLMTFAIYGNYFDEYANGG AGRLGTLLFLLITPLIMMHLFRE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32750-PA | 523 | CG32750-PA | 1..523 | 1..523 | 2720 | 100 | Plus |
vanin-like-PA | 558 | CG32754-PA | 29..519 | 25..502 | 832 | 40.7 | Plus |
CG32751-PA | 517 | CG32751-PA | 9..502 | 8..502 | 803 | 38.7 | Plus |
CG32751-PB | 525 | CG32751-PB | 9..510 | 8..502 | 784 | 38.2 | Plus |
Btd-PA | 553 | CG3599-PA | 25..510 | 25..495 | 619 | 36.9 | Plus |