BDGP Sequence Production Resources |
Search the DGRC for RT09244
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 92 |
Well: | 44 |
Vector: | pCR2.1 |
Associated Gene/Transcript | CG13775-RA |
Protein status: | RT09244.pep: gold |
Sequenced Size: | 1945 |
1945 bp assembled on 2010-07-15
GenBank Submission: BT125060.1
> RT09244.complete GCCGCAGAACGGATGTAGAGGCGGATGTGGACATCCGCAAAAAATGTACA ATTTGAGAATTACCAAAGAATTGCAGCGATGAGCAAGAAGAAAAGCAATG TGTGGCAGTACTTCTACAAGACATCCGGCACAGTGGCCACCTGTCTGCTG TGCAACAGGAACTACTCGAGGCGAGGACGCGGCACAACATGTCTGCGGAA TCATCTGAAGAGCAAGCACCCACCGGAGTTCCTATCTCTATCCGGGGACA TAAAGTACCTGGACCTGGTTAAGAGCGAGATCTCCATCGGTTCGCCACAG CACCCCACAGCCCAGCTAGAATTGAATCTGCACGAAACAGATTCAGATCC ATTGGACACCGAGGATATATCCTACAGCAAACGCTGTGATGAGAAGTTGG CCCTCATGCTACTAAATCACTCCTTTGAGTTCATTGAAGGACCAGGATTC GTAAATTTCATTAGGACGCTGCAGCCGCGGTACACGATTCAACCAAGGAG CTACTATGAGAAGATACTGTGCGAGGATATACAAAGGAAAATGCATCAGC ATTTGAAGCAACAGGTGGATCTGCTGGATGCCATATCGTTGTCTACGAGT CTCTGGCGTGGTGACAAAGGCGAAGGACTGCTGAGCTTGTCCTGCTCCGG AATATCAAGGGATTTTCAGACTCACCGCCTAATGCTGAAATGCGAGGCTC TGAATTACGAAAGCACTTCGAAGCTAGCTTGTTGCATTCGAGATCTTGTG CCCAGCTTGGCCATTGAGGTGCCCAAAGAGAAGATACACTGCGTAATCAG GGACGAGATGACGGCGCTGCCAGGTTCCCTGCCCGATTGCAGTGTGCACC GCCTGCAGATGTGCGTTCGATTTGCTTTGCAATCGAACGAATTACTGCAG AACCTTTCATCCAAGTGCAAGCAAATAGTTGACCATTTTGCGTCGTCTAA GATGGCCAACGATCATCTGAAATTCATTCAAGAGATCCGCTTGACGCGAG ACCCGTGCACACTTACACCTTACGATCCCTGTCAATGGAATTCCGCTTTT CAGATGATGAGCAGCGTGTTTCGAATGAAAGATGCTCTATCCTTGTACTG CGAAGAGTATAGTCTGGTCCAAATATATCCAGATGAATGGATAGAGATCG ATTTGTGCAGCAAAGTAATGCAGCCTTGTGAAGAAACAATCAAGATATGG AGCAATCCATCTACGACCACCTCATCCGTAATCCCGCTGGTTGCCGCTTT ACGGGATTCCCTCCGAACAGATGTCCATAACTTTGTCTCATCTGTGACTA TATGCAGTTTCGCCAGAAAGTTGCTTGAAGAACTGGAAATGAAGTTCGCC CACATCACTAGCGACATCAACTTTTTGATGGCCACATATTTGGATCCGAG ATATAAGCAAGCATTTTTCACCGAACGTGAGGAGCAGTTGGTGGCCAATG AAGTTCTGCTTCAGCTCGCTGGAGTGCCAGAGGATTGCAATGGTCAGCCA CCGCTGAAAATAATCAAAGTGTCATCCACATCGTCCCAGAAGAATGAATC AAAGATCGATAGCATTCTGGATAGCATACTGACAACTGGAACGACGAACA CTCAACAGCCAAATACGTCAATGGGCTCCCAGTCTCAGATTAAGAATCTG CTATATCTATACAACTCCGAACCCAGAATCGATAGGAACATGGATCCCCT GATTTGGTGGAGGAGCAACATAAAATACATATCCTTGTATGGCATTGTTA GGAAATTCTTATCAGCACCAGCAGCAAGTGTGGTTAGTGAAGGCTTATTT AGAAAATCAACGCACTTGTATTTCGACATGCAGGCGGGCTTGAGCCCCGA AAGTGCATCCAAAATGTTGCTCATGAAGGCCAACTTTAGCTTTAGCAATT CGGAAATCAATTAGGATACAGTAATTTATATAATTTAAACGTATT
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13775-RA | 1947 | CG13775-RA | 1..1945 | 1..1945 | 9725 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6954341..6955303 | 1296..334 | 4815 | 100 | Minus |
chr2L | 23010047 | chr2L | 6953638..6954287 | 1945..1296 | 3250 | 100 | Minus |
chr2L | 23010047 | chr2L | 6955701..6956034 | 334..1 | 1670 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6955257..6956219 | 1296..334 | 4815 | 100 | Minus |
2L | 23513712 | 2L | 6954554..6955203 | 1945..1296 | 3250 | 100 | Minus |
2L | 23513712 | 2L | 6956617..6956950 | 334..1 | 1670 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6955257..6956219 | 1296..334 | 4815 | 100 | Minus |
2L | 23513712 | 2L | 6954554..6955203 | 1945..1296 | 3250 | 100 | Minus |
2L | 23513712 | 2L | 6956617..6956950 | 334..1 | 1670 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6953638..6954286 | 1297..1945 | 100 | <- | Minus |
chr2L | 6954341..6955303 | 334..1296 | 100 | <- | Minus |
chr2L | 6955702..6956034 | 1..333 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13775-RA | 1..1836 | 79..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13775-RA | 1..1836 | 79..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13775-RA | 1..1836 | 79..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13775-RA | 1..1836 | 79..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13775-RA | 1..1836 | 79..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13775-RA | 1..1836 | 79..1914 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13775-RA | 1..1945 | 1..1945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13775-RA | 1..1945 | 1..1945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6954554..6955202 | 1297..1945 | 100 | <- | Minus |
2L | 6955257..6956219 | 334..1296 | 100 | <- | Minus |
2L | 6956618..6956950 | 1..333 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6954554..6955202 | 1297..1945 | 100 | <- | Minus |
2L | 6955257..6956219 | 334..1296 | 100 | <- | Minus |
2L | 6956618..6956950 | 1..333 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6954554..6955202 | 1297..1945 | 100 | <- | Minus |
2L | 6955257..6956219 | 334..1296 | 100 | <- | Minus |
2L | 6956618..6956950 | 1..333 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6954554..6955202 | 1297..1945 | 100 | <- | Minus |
arm_2L | 6955257..6956219 | 334..1296 | 100 | <- | Minus |
arm_2L | 6956618..6956950 | 1..333 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6954554..6955202 | 1297..1945 | 100 | <- | Minus |
2L | 6955257..6956219 | 334..1296 | 100 | <- | Minus |
2L | 6956618..6956950 | 1..333 | 100 | Minus |
Translation from 24 to 1913
> RT09244.pep MWTSAKNVQFENYQRIAAMSKKKSNVWQYFYKTSGTVATCLLCNRNYSRR GRGTTCLRNHLKSKHPPEFLSLSGDIKYLDLVKSEISIGSPQHPTAQLEL NLHETDSDPLDTEDISYSKRCDEKLALMLLNHSFEFIEGPGFVNFIRTLQ PRYTIQPRSYYEKILCEDIQRKMHQHLKQQVDLLDAISLSTSLWRGDKGE GLLSLSCSGISRDFQTHRLMLKCEALNYESTSKLACCIRDLVPSLAIEVP KEKIHCVIRDEMTALPGSLPDCSVHRLQMCVRFALQSNELLQNLSSKCKQ IVDHFASSKMANDHLKFIQEIRLTRDPCTLTPYDPCQWNSAFQMMSSVFR MKDALSLYCEEYSLVQIYPDEWIEIDLCSKVMQPCEETIKIWSNPSTTTS SVIPLVAALRDSLRTDVHNFVSSVTICSFARKLLEELEMKFAHITSDINF LMATYLDPRYKQAFFTEREEQLVANEVLLQLAGVPEDCNGQPPLKIIKVS STSSQKNESKIDSILDSILTTGTTNTQQPNTSMGSQSQIKNLLYLYNSEP RIDRNMDPLIWWRSNIKYISLYGIVRKFLSAPAASVVSEGLFRKSTHLYF DMQAGLSPESASKMLLMKANFSFSNSEIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14464-PA | 409 | GF14464-PA | 1..404 | 220..623 | 1633 | 73.3 | Plus |
Dana\GF14465-PA | 122 | GF14465-PA | 3..117 | 22..130 | 382 | 65 | Plus |
Dana\GF22278-PA | 258 | GF22278-PA | 13..239 | 134..357 | 197 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23564-PA | 611 | GG23564-PA | 1..611 | 19..629 | 3100 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11357-PA | 602 | GH11357-PA | 3..594 | 22..621 | 1545 | 51.5 | Plus |
Dgri\GH23400-PA | 405 | GH23400-PA | 3..403 | 22..425 | 1045 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13775-PB | 611 | CG13775-PB | 1..611 | 19..629 | 3185 | 100 | Plus |
CG13775-PA | 611 | CG13775-PA | 1..611 | 19..629 | 3185 | 100 | Plus |
CG13775-PC | 502 | CG13775-PC | 1..502 | 128..629 | 2604 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17735-PA | 610 | GI17735-PA | 3..604 | 22..621 | 1734 | 56.7 | Plus |
Dmoj\GI16010-PA | 485 | GI16010-PA | 50..386 | 134..465 | 212 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25597-PA | 606 | GL25597-PA | 3..606 | 22..628 | 2165 | 66.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12516-PA | 606 | GA12516-PA | 3..606 | 22..628 | 2162 | 66.5 | Plus |
Dpse\GA25633-PA | 534 | GA25633-PA | 33..505 | 116..592 | 230 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13709-PA | 611 | GM13709-PA | 1..611 | 19..629 | 3185 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22525-PA | 611 | GD22525-PA | 1..611 | 19..629 | 3214 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17561-PA | 606 | GJ17561-PA | 3..600 | 22..621 | 1728 | 56.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24779-PA | 612 | GK24779-PA | 1..612 | 19..629 | 1577 | 52.3 | Plus |
Dwil\GK16089-PA | 467 | GK16089-PA | 6..348 | 131..469 | 176 | 20.7 | Plus |
Dwil\GK24889-PA | 312 | GK24889-PA | 55..237 | 24..226 | 164 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18388-PA | 611 | GE18388-PA | 1..611 | 19..629 | 3138 | 95.3 | Plus |
Translation from 24 to 1913
> RT09244.hyp MWTSAKNVQFENYQRIAAMSKKKSNVWQYFYKTSGTVATCLLCNRNYSRR GRGTTCLRNHLKSKHPPEFLSLSGDIKYLDLVKSEISIGSPQHPTAQLEL NLHETDSDPLDTEDISYSKRCDEKLALMLLNHSFEFIEGPGFVNFIRTLQ PRYTIQPRSYYEKILCEDIQRKMHQHLKQQVDLLDAISLSTSLWRGDKGE GLLSLSCSGISRDFQTHRLMLKCEALNYESTSKLACCIRDLVPSLAIEVP KEKIHCVIRDEMTALPGSLPDCSVHRLQMCVRFALQSNELLQNLSSKCKQ IVDHFASSKMANDHLKFIQEIRLTRDPCTLTPYDPCQWNSAFQMMSSVFR MKDALSLYCEEYSLVQIYPDEWIEIDLCSKVMQPCEETIKIWSNPSTTTS SVIPLVAALRDSLRTDVHNFVSSVTICSFARKLLEELEMKFAHITSDINF LMATYLDPRYKQAFFTEREEQLVANEVLLQLAGVPEDCNGQPPLKIIKVS STSSQKNESKIDSILDSILTTGTTNTQQPNTSMGSQSQIKNLLYLYNSEP RIDRNMDPLIWWRSNIKYISLYGIVRKFLSAPAASVVSEGLFRKSTHLYF DMQAGLSPESASKMLLMKANFSFSNSEIN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13775-PB | 611 | CG13775-PB | 1..611 | 19..629 | 3185 | 100 | Plus |
CG13775-PA | 611 | CG13775-PA | 1..611 | 19..629 | 3185 | 100 | Plus |
CG13775-PC | 502 | CG13775-PC | 1..502 | 128..629 | 2604 | 100 | Plus |