Clone RT10616 Report

Search the DGRC for RT10616

Clone and Library Details

Library:RT
Tissue Source:D melanogaster pooled RNA
Created by:
Date Registered:2006-04-14
Comments:TA cloning vector from Invitrogen
Original Plate Number:106
Well:16
Vector:pCR2.1
Associated Gene/TranscriptCG8159-RB
Protein status:RT10616.pep: gold
Sequenced Size:1328

Clone Sequence Records

RT10616.complete Sequence

1328 bp assembled on 2011-02-04

GenBank Submission: BT125982.1

> RT10616.complete
TGGCAAATCAGTTTTGGGTGGCTGTCTTGTTTACAATTGGAAATTTACTA
ATTAGAATCGAGTAAGCTGGTAAAATGCTGCAAAATGTGTGCCGCGTGTG
TGCCAGCAGCACGGACAACTCGAAATCGTTGAAACTATTTAACAGCGGCG
CCTGCAAAGTGCTGCAACAAATCAATTTGCTCACCGGTGTTCTGCTGCAA
TGCGAACCCGGTTTACCCGACTGGATGTGCGAGACCTGCCAGACGGATTT
GAAAAGCGCCATATCCTTTCGTGATCGCTGCTTGAGGAGTCAGAAGATCT
TTGAAGAGTCGCTGGTCAGGAATGAAGAGGACACATTCCGCTCCTCAGTT
CGTCGCAGTGCCCGTTCCCAAAGACAGCGGCATGAAGACACCGCTCCAAA
GACGCCAGCAAGTCCGCTGGAGGTAATGATTAAGCTGGAGAGCCTGAGCA
ATGGCGATGAGGAGGATGATGGCATCGATCACCTAGACTCCTGCAACGAA
GCAGACATGGAGCTGGCCATTAAAGCGATGTCCAGCTCTACCGAAGATGA
TGGAACTACCTCACCGGTCAGATTGAAAAGAACCCGACGTCGGGGACTTA
AGAAAGGCGGGAAAGGTGAAAATCGCACAAAGGTTACGCTTCCAGTTTTC
TTTTGCGATCAGTGCGGCAACAATATTACAGGGAAGTCCTCCTTCGACCG
TCACCTACGCAAACACAGCGGAATTAGGCCCTTTCAGTGCGAACTCTGCC
CCGCCCGCTTCCTGTCCTCCGGTGAGCTGAAAGGACACCAAGTGATGCAC
ACTGGAGATCGCAAGTTCCAGTGTCGTTACTGTGACCGCACCTACGTCAA
CTACAGTGGTCGCCTGCGTCACGAGCGGACCCACACAAATGATCGACCCT
TTATTTGTGCGCAGTGCGGCAAGAGCTTTACCAATTCCTACATCCTCAAG
AACCACATGCTTATCCACACGGGCGAGCGCCTGTTCAGATGTGAGCTGTG
CCATCGATCCTTTGCGCGACCCACCCACTTGAAGACTCACTTCCGCTCTA
ACACTCATAAGCACAACTTGGAGAAATCGATGGCAGACGCGGGTGGAGTT
CAGCTGTCACCATCCCAGTCAGCGGATCAGGTCAAATTCGTGACGGAAAA
GGAGCCAGAAGCAGAGGCGGATGCCTTTACGATAGAAGTGCCTTTGCCCG
CGGAGCAGGAGCAGGATGAGTCTTTGGGCCTGGCTGCTCTGGAAACATCC
ACTCTAATGTATAGTACAAACTAGACCTTAATGAGTCCATCTCAACCTTT
AAAGCCAAATATAGTTCACAATTTGATT

RT10616.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-17 01:37:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 4553075..4553623 194..742 2730 99.8 Plus
chr3R 27901430 chr3R 4553994..4554336 986..1328 1715 100 Plus
chr3R 27901430 chr3R 4553692..4553937 743..988 1230 100 Plus
chr3R 27901430 chr3R 4552820..4553013 1..194 955 99.5 Plus
chr3R 27901430 chr3R 4552282..4552389 870..977 240 81.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 01:37:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8727109..8727657 194..742 2730 99.8 Plus
3R 32079331 3R 8728028..8728370 986..1328 1715 100 Plus
3R 32079331 3R 8727726..8727971 743..988 1230 100 Plus
3R 32079331 3R 8726854..8727047 1..194 970 100 Plus
3R 32079331 3R 8726315..8726422 870..977 240 81.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 8467940..8468488 194..742 2730 99.8 Plus
3R 31820162 3R 8468859..8469201 986..1328 1715 100 Plus
3R 31820162 3R 8468557..8468802 743..988 1230 100 Plus
3R 31820162 3R 8467685..8467878 1..194 970 100 Plus
3R 31820162 3R 8467146..8467253 870..977 240 81.4 Plus
Blast to na_te.dros performed on 2019-03-17 01:37:18 has no hits.

RT10616.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 01:38:25 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 4552820..4553013 1..194 99 -> Plus
chr3R 4553076..4553623 195..742 99 -> Plus
chr3R 4553692..4553937 743..988 100 -> Plus
chr3R 4553997..4554336 989..1328 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-02-04 14:21:40 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
CG8159-RB 1..1200 75..1274 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:45:21 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
CG8159-RB 1..1200 75..1274 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 18:04:07 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
CG8159-RB 1..1200 75..1274 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-04 14:21:39 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
CG8159-RB 1..1328 1..1328 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:45:21 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
CG8159-RB 1..1328 1..1328 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 18:04:07 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
CG8159-RB 1..1328 1..1328 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:25 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8726854..8727047 1..194 100 -> Plus
3R 8727110..8727657 195..742 99 -> Plus
3R 8727726..8727971 743..988 100 -> Plus
3R 8728031..8728370 989..1328 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:25 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8726854..8727047 1..194 100 -> Plus
3R 8727110..8727657 195..742 99 -> Plus
3R 8727726..8727971 743..988 100 -> Plus
3R 8728031..8728370 989..1328 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 01:38:25 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8726854..8727047 1..194 100 -> Plus
3R 8727110..8727657 195..742 99 -> Plus
3R 8727726..8727971 743..988 100 -> Plus
3R 8728031..8728370 989..1328 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:45:21 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4552576..4552769 1..194 100 -> Plus
arm_3R 4552832..4553379 195..742 99 -> Plus
arm_3R 4553448..4553693 743..988 100 -> Plus
arm_3R 4553753..4554092 989..1328 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:57:09 Download gff for RT10616.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8467685..8467878 1..194 100 -> Plus
3R 8467941..8468488 195..742 99 -> Plus
3R 8468557..8468802 743..988 100 -> Plus
3R 8468862..8469201 989..1328 100   Plus

RT10616.pep Sequence

Translation from 74 to 1273

> RT10616.pep
MLQNVCRVCASSTDNSKSLKLFNSGACKVLQQINLLTGVLLQCEPGLPDW
MCETCQTDLKSAISFRDRCLRSQKIFEESLVRNEEDTFRSSVRRSARSQR
QRHEDTAPKTPASPLEVMIKLESLSNGDEEDDGIDHLDSCNEADMELAIK
AMSSSTEDDGTTSPVRLKRTRRRGLKKGGKGENRTKVTLPVFFCDQCGNN
ITGKSSFDRHLRKHSGIRPFQCELCPARFLSSGELKGHQVMHTGDRKFQC
RYCDRTYVNYSGRLRHERTHTNDRPFICAQCGKSFTNSYILKNHMLIHTG
ERLFRCELCHRSFARPTHLKTHFRSNTHKHNLEKSMADAGGVQLSPSQSA
DQVKFVTEKEPEAEADAFTIEVPLPAEQEQDESLGLAALETSTLMYSTN*

RT10616.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:38:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18186-PA 409 GF18186-PA 1..409 1..399 1308 62.1 Plus
Dana\GF18185-PA 317 GF18185-PA 1..315 1..333 658 41.9 Plus
Dana\GF16841-PA 430 GF16841-PA 215..406 142..335 523 47.4 Plus
Dana\GF17452-PA 372 GF17452-PA 5..345 6..329 431 31.4 Plus
Dana\GF22975-PA 367 GF22975-PA 5..338 6..331 419 31.4 Plus
Dana\GF16841-PA 430 GF16841-PA 9..81 2..74 159 42.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:38:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12737-PA 394 GG12737-PA 1..394 1..399 1825 92.7 Plus
Dere\GG12626-PA 304 GG12626-PA 1..304 1..340 638 40.5 Plus
Dere\GG17429-PA 418 GG17429-PA 9..394 2..335 611 34.7 Plus
Dere\GG17430-PA 347 GG17430-PA 1..332 1..329 579 38.5 Plus
Dere\GG12567-PA 370 GG12567-PA 1..324 1..333 566 38.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:38:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18577-PA 386 GH18577-PA 1..385 1..374 1034 56.2 Plus
Dgri\GH18576-PA 371 GH18576-PA 1..357 5..332 651 39.2 Plus
Dgri\GH19018-PA 716 GH19018-PA 349..708 7..334 586 36.8 Plus
Dgri\GH19016-PA 442 GH19016-PA 225..414 129..334 483 46.1 Plus
Dgri\GH19018-PA 716 GH19018-PA 1..349 5..305 473 33.2 Plus
Dgri\GH18111-PA 383 GH18111-PA 6..369 5..333 428 29.9 Plus
Dgri\GH19016-PA 442 GH19016-PA 9..166 2..168 169 28.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG8159-PB 399 CG8159-PB 1..399 1..399 2113 100 Plus
ranshi-PA 346 CG9793-PA 5..339 5..335 646 39 Plus
M1BP-PA 418 CG9797-PA 9..394 2..335 636 34.7 Plus
ouib-PA 312 CG11762-PA 1..309 1..334 613 38.2 Plus
nom-PB 370 CG8145-PB 1..324 1..333 596 39.1 Plus
nom-PC 370 CG8145-PC 1..324 1..333 596 39.1 Plus
nom-PA 370 CG8145-PA 1..324 1..333 596 39.1 Plus
CG1792-PA 372 CG1792-PA 6..354 6..349 476 34.2 Plus
CG14711-PA 377 CG14711-PA 6..366 5..332 451 28 Plus
CG31441-PA 341 CG31441-PA 4..338 2..335 444 28.5 Plus
CG18764-PA 409 CG18764-PA 5..395 6..328 438 29.2 Plus
CG17806-PA 421 CG17806-PA 1..406 2..334 428 28.3 Plus
CG14710-PB 415 CG14710-PB 10..406 6..336 420 27 Plus
CG4424-PA 345 CG4424-PA 7..323 2..328 382 28 Plus
CG6813-PC 294 CG6813-PC 6..286 6..334 380 30.8 Plus
CG4854-PA 319 CG4854-PA 34..317 32..333 358 27.8 Plus
CG9215-PA 560 CG9215-PA 200..475 101..362 353 28.5 Plus
CG17802-PA 439 CG17802-PA 160..425 77..332 352 32.5 Plus
trem-PA 439 CG4413-PA 11..419 5..335 351 25.7 Plus
CG14667-PB 337 CG14667-PB 3..328 2..338 345 27.6 Plus
CG15436-PA 346 CG15436-PA 1..286 2..324 339 27.2 Plus
Zif-PC 388 CG10267-PC 10..361 6..330 334 25.5 Plus
Zif-PB 388 CG10267-PB 10..361 6..330 334 25.5 Plus
Zif-PA 388 CG10267-PA 10..361 6..330 334 25.5 Plus
Kr-PB 502 CG3340-PB 222..388 192..368 316 36.2 Plus
Kr-PA 502 CG3340-PA 222..388 192..368 316 36.2 Plus
CG4936-PA 521 CG4936-PA 209..490 44..322 311 28.1 Plus
CG6813-PD 256 CG6813-PD 6..254 6..302 308 29.4 Plus
CG6813-PB 256 CG6813-PB 6..254 6..302 308 29.4 Plus
CG31388-PA 446 CG31388-PA 1..402 2..333 303 24.3 Plus
CG44002-PA 345 CG44002-PA 1..332 2..324 302 26.8 Plus
crol-PF 907 CG14938-PF 275..412 190..327 301 38.4 Plus
CG6808-PB 375 CG6808-PB 8..364 4..329 300 26.7 Plus
CG6808-PA 375 CG6808-PA 8..364 4..329 300 26.7 Plus
gl-PC 679 CG7672-PC 439..610 194..363 295 33.7 Plus
crol-PD 878 CG14938-PD 275..412 190..327 295 37.7 Plus
crol-PG 878 CG14938-PG 275..412 190..327 294 37.7 Plus
crol-PB 891 CG14938-PB 333..468 192..327 293 38.2 Plus
crol-PI 962 CG14938-PI 333..468 192..327 293 38.2 Plus
crol-PE 962 CG14938-PE 333..468 192..327 293 38.2 Plus
crol-PA 962 CG14938-PA 333..468 192..327 293 38.2 Plus
crol-PB 891 CG14938-PB 275..414 190..329 292 35.7 Plus
crol-PI 962 CG14938-PI 275..414 190..329 292 35.7 Plus
crol-PE 962 CG14938-PE 275..414 190..329 292 35.7 Plus
crol-PA 962 CG14938-PA 275..414 190..329 292 35.7 Plus
Meics-PB 571 CG8474-PB 346..474 194..322 291 37.2 Plus
Meics-PA 583 CG8474-PA 358..486 194..322 291 37.2 Plus
gl-PA 604 CG7672-PA 439..588 194..341 291 36.7 Plus
CG17385-PB 278 CG17385-PB 40..180 183..326 289 31.9 Plus
CG17385-PA 278 CG17385-PA 40..180 183..326 289 31.9 Plus
CG6654-PA 639 CG6654-PA 440..574 192..326 286 36.3 Plus
crol-PC 756 CG14938-PC 153..318 146..327 286 31.3 Plus
Clamp-PA 561 CG1832-PA 352..490 180..322 285 36.4 Plus
crol-PB 891 CG14938-PB 391..524 194..327 284 36.6 Plus
crol-PI 962 CG14938-PI 391..524 194..327 284 36.6 Plus
crol-PE 962 CG14938-PE 391..524 194..327 284 36.6 Plus
crol-PA 962 CG14938-PA 391..524 194..327 284 36.6 Plus
Clamp-PB 566 CG1832-PB 365..495 192..322 284 36.6 Plus
CG17359-PA 339 CG17359-PA 3..322 2..299 283 26.6 Plus
crol-PG 878 CG14938-PG 391..524 194..327 279 35.1 Plus
crol-PB 891 CG14938-PB 475..608 194..327 279 35.1 Plus
crol-PI 962 CG14938-PI 475..608 194..327 279 35.1 Plus
crol-PE 962 CG14938-PE 475..608 194..327 279 35.1 Plus
crol-PA 962 CG14938-PA 475..608 194..327 279 35.1 Plus
crol-PC 756 CG14938-PC 269..402 194..327 279 35.1 Plus
Meics-PB 571 CG8474-PB 21..392 6..324 278 22.3 Plus
crol-PF 907 CG14938-PF 420..553 194..327 277 35.8 Plus
crol-PD 878 CG14938-PD 391..524 194..327 277 35.8 Plus
Meics-PA 583 CG8474-PA 274..404 194..324 275 36.6 Plus
crol-PG 878 CG14938-PG 333..468 192..327 275 36 Plus
CG6654-PA 639 CG6654-PA 468..598 192..322 275 35.1 Plus
crol-PD 878 CG14938-PD 333..468 192..327 274 35.3 Plus
crol-PG 878 CG14938-PG 305..440 192..327 274 35.3 Plus
Clamp-PA 561 CG1832-PA 390..552 194..367 273 31.4 Plus
Clamp-PB 566 CG1832-PB 395..557 194..367 273 31.4 Plus
crol-PB 891 CG14938-PB 417..552 192..327 272 35.3 Plus
crol-PI 962 CG14938-PI 417..552 192..327 272 35.3 Plus
crol-PE 962 CG14938-PE 417..552 192..327 272 35.3 Plus
crol-PA 962 CG14938-PA 417..552 192..327 272 35.3 Plus
crol-PC 756 CG14938-PC 211..346 192..327 272 35.3 Plus
crol-PF 907 CG14938-PF 476..620 194..337 270 36.6 Plus
crol-PD 878 CG14938-PD 447..591 194..337 270 36.6 Plus
crol-PG 878 CG14938-PG 447..591 194..337 270 36.6 Plus
crol-PB 891 CG14938-PB 531..675 194..337 270 36.6 Plus
crol-PI 962 CG14938-PI 531..675 194..337 270 36.6 Plus
crol-PE 962 CG14938-PE 531..675 194..337 270 36.6 Plus
crol-PA 962 CG14938-PA 531..675 194..337 270 36.6 Plus
crol-PC 756 CG14938-PC 325..469 194..337 270 36.6 Plus
crol-PF 907 CG14938-PF 153..356 146..327 269 29.9 Plus
crol-PD 878 CG14938-PD 153..356 146..327 269 29.9 Plus
crol-PG 878 CG14938-PG 153..356 146..327 269 29.9 Plus
crol-PG 878 CG14938-PG 363..496 194..327 269 35.8 Plus
crol-PB 891 CG14938-PB 153..356 146..327 269 29.9 Plus
crol-PB 891 CG14938-PB 447..580 194..327 269 35.8 Plus
crol-PI 962 CG14938-PI 153..356 146..327 269 29.9 Plus
crol-PI 962 CG14938-PI 447..580 194..327 269 35.8 Plus
crol-PE 962 CG14938-PE 153..356 146..327 269 29.9 Plus
crol-PE 962 CG14938-PE 447..580 194..327 269 35.8 Plus
crol-PA 962 CG14938-PA 153..356 146..327 269 29.9 Plus
crol-PA 962 CG14938-PA 447..580 194..327 269 35.8 Plus
crol-PC 756 CG14938-PC 241..374 194..327 269 35.8 Plus
CG6654-PA 639 CG6654-PA 414..547 194..327 262 36.6 Plus
crol-PD 878 CG14938-PD 363..496 194..327 259 35.1 Plus
crol-PG 878 CG14938-PG 249..384 192..327 258 35.3 Plus
crol-PF 907 CG14938-PF 389..525 192..327 257 35 Plus
Meics-PA 583 CG8474-PA 21..395 6..343 256 23.2 Plus
crol-PF 907 CG14938-PF 249..386 192..329 255 33.3 Plus
crol-PD 878 CG14938-PD 249..384 192..327 253 34.6 Plus
crol-PD 878 CG14938-PD 305..440 192..327 253 33.8 Plus
crol-PB 891 CG14938-PB 249..384 192..327 253 34.6 Plus
crol-PI 962 CG14938-PI 249..384 192..327 253 34.6 Plus
crol-PE 962 CG14938-PE 249..384 192..327 253 34.6 Plus
crol-PA 962 CG14938-PA 249..384 192..327 253 34.6 Plus
CG31388-PA 446 CG31388-PA 286..424 194..329 249 36 Plus
crol-PF 907 CG14938-PF 448..576 194..322 248 34.9 Plus
crol-PD 878 CG14938-PD 419..547 194..322 248 34.9 Plus
crol-PG 878 CG14938-PG 417..547 192..322 248 35.1 Plus
crol-PB 891 CG14938-PB 501..631 192..322 248 35.1 Plus
crol-PI 962 CG14938-PI 501..631 192..322 248 35.1 Plus
crol-PE 962 CG14938-PE 501..631 192..322 248 35.1 Plus
crol-PA 962 CG14938-PA 501..631 192..322 248 35.1 Plus
crol-PC 756 CG14938-PC 295..425 192..322 248 35.1 Plus
CG17385-PB 278 CG17385-PB 16..171 192..345 246 31.4 Plus
CG17385-PA 278 CG17385-PA 16..171 192..345 246 31.4 Plus
crol-PF 907 CG14938-PF 532..669 194..326 239 34.8 Plus
crol-PD 878 CG14938-PD 503..640 194..326 239 34.8 Plus
crol-PG 878 CG14938-PG 503..640 194..326 239 34.8 Plus
crol-PI 962 CG14938-PI 587..724 194..326 239 34.8 Plus
crol-PE 962 CG14938-PE 587..724 194..326 239 34.8 Plus
crol-PA 962 CG14938-PA 587..724 194..326 239 34.8 Plus
crol-PC 756 CG14938-PC 381..518 194..326 239 34.8 Plus
crol-PF 907 CG14938-PF 504..642 194..327 234 35.3 Plus
crol-PD 878 CG14938-PD 475..613 194..327 234 35.3 Plus
crol-PG 878 CG14938-PG 475..613 194..327 234 35.3 Plus
crol-PI 962 CG14938-PI 559..697 194..327 234 35.3 Plus
crol-PE 962 CG14938-PE 559..697 194..327 234 35.3 Plus
crol-PA 962 CG14938-PA 559..697 194..327 234 35.3 Plus
crol-PC 756 CG14938-PC 353..491 194..327 234 35.3 Plus
CG6654-PA 639 CG6654-PA 496..602 192..298 231 36.4 Plus
CG4936-PA 521 CG4936-PA 390..494 194..298 226 35.8 Plus
Clamp-PA 561 CG1832-PA 358..467 218..327 215 34.5 Plus
Clamp-PB 566 CG1832-PB 363..472 218..327 215 34.5 Plus
gl-PC 679 CG7672-PC 434..541 217..324 210 34.3 Plus
gl-PA 604 CG7672-PA 434..541 217..324 210 34.3 Plus
CG6654-PA 639 CG6654-PA 329..491 192..327 208 29.4 Plus
CG6654-PA 639 CG6654-PA 385..519 194..327 205 28.9 Plus
CG15436-PA 346 CG15436-PA 238..342 192..296 202 35.2 Plus
Kr-PB 502 CG3340-PB 219..301 245..327 202 41 Plus
Kr-PA 502 CG3340-PA 219..301 245..327 202 41 Plus
CG17385-PB 278 CG17385-PB 74..183 192..301 201 32.7 Plus
CG17385-PA 278 CG17385-PA 74..183 192..301 201 32.7 Plus
Kr-PB 502 CG3340-PB 228..352 170..294 190 28.8 Plus
Kr-PA 502 CG3340-PA 228..352 170..294 190 28.8 Plus
Meics-PB 571 CG8474-PB 420..571 184..334 188 31.2 Plus
Meics-PA 583 CG8474-PA 432..583 184..334 188 31.2 Plus
Clamp-PA 561 CG1832-PA 358..452 246..340 181 31.6 Plus
Clamp-PB 566 CG1832-PB 363..457 246..340 181 31.6 Plus
crol-PB 891 CG14938-PB 587..683 194..285 171 35.1 Plus
CG14711-PA 377 CG14711-PA 282..373 192..274 165 35.9 Plus
Kr-PB 502 CG3340-PB 217..291 271..345 158 40 Plus
Kr-PA 502 CG3340-PA 217..291 271..345 158 40 Plus
CG17359-PA 339 CG17359-PA 215..315 248..348 156 30.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:38:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22394-PA 371 GI22394-PA 1..369 1..374 1057 57.3 Plus
Dmoj\GI22393-PA 359 GI22393-PA 1..347 1..334 672 40.6 Plus
Dmoj\GI10370-PA 703 GI10370-PA 1..384 1..333 618 36.3 Plus
Dmoj\GI10369-PA 436 GI10369-PA 252..408 165..334 476 50 Plus
Dmoj\GI10370-PA 703 GI10370-PA 520..694 150..334 460 46.5 Plus
Dmoj\GI24612-PA 380 GI24612-PA 6..366 5..333 423 30.2 Plus
Dmoj\GI10369-PA 436 GI10369-PA 9..95 2..88 183 40.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:38:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12478-PA 401 GL12478-PA 1..401 1..399 1273 61.6 Plus
Dper\GL12476-PA 333 GL12476-PA 1..332 1..342 691 40.3 Plus
Dper\GL12135-PA 433 GL12135-PA 218..409 142..335 514 46.9 Plus
Dper\GL12475-PA 340 GL12475-PA 1..316 1..331 507 38 Plus
Dper\GL23638-PA 343 GL23638-PA 1..336 29..344 423 30.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20857-PA 401 GA20857-PA 1..401 1..399 1265 61.1 Plus
Dpse\GA11182-PA 333 GA11182-PA 1..332 1..342 690 40.7 Plus
Dpse\GA22043-PA 398 GA22043-PA 223..374 184..335 514 55.9 Plus
Dpse\GA20848-PA 340 GA20848-PA 1..316 1..331 507 38 Plus
Dpse\GA13193-PA 374 GA13193-PA 6..359 5..332 406 29.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:38:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23759-PA 399 GM23759-PA 1..399 1..399 1949 94.2 Plus
Dsec\GM26322-PA 346 GM26322-PA 1..334 5..335 604 38 Plus
Dsec\GM23758-PA 312 GM23758-PA 1..309 1..334 601 38 Plus
Dsec\GM23757-PA 370 GM23757-PA 1..322 1..331 542 37.4 Plus
Dsec\GM16437-PA 377 GM16437-PA 6..361 6..351 449 33.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18570-PA 399 GD18570-PA 1..399 1..399 1968 95.2 Plus
Dsim\GD20849-PA 397 GD20849-PA 48..385 1..335 626 38 Plus
Dsim\GD18569-PA 312 GD18569-PA 1..309 1..334 592 38.4 Plus
Dsim\GD18568-PA 370 GD18568-PA 1..322 1..331 542 37.4 Plus
Dsim\GD18768-PA 377 GD18768-PA 6..366 5..332 431 28.6 Plus
Dsim\GD18768-PA 377 GD18768-PA 282..373 192..274 153 35.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22679-PA 375 GJ22679-PA 1..342 1..335 1017 59.6 Plus
Dvir\GJ22678-PA 361 GJ22678-PA 1..349 1..334 737 41.8 Plus
Dvir\GJ24586-PA 743 GJ24586-PA 1..387 1..334 620 37.7 Plus
Dvir\GJ24586-PA 743 GJ24586-PA 385..734 30..334 501 36.1 Plus
Dvir\GJ24585-PA 436 GJ24585-PA 197..408 118..334 482 42.6 Plus
Dvir\GJ22562-PA 378 GJ22562-PA 6..363 5..332 421 29.1 Plus
Dvir\GJ24585-PA 436 GJ24585-PA 9..93 2..86 170 38.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:38:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11276-PA 396 GK11276-PA 1..394 1..380 1005 51.7 Plus
Dwil\GK11273-PA 347 GK11273-PA 1..343 1..346 642 39.2 Plus
Dwil\GK11270-PA 359 GK11270-PA 2..356 4..340 589 34.8 Plus
Dwil\GK11272-PA 402 GK11272-PA 1..393 1..357 524 34.5 Plus
Dwil\GK11271-PA 440 GK11271-PA 177..419 78..335 514 39.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25903-PA 398 GE25903-PA 1..398 1..399 1904 93.2 Plus
Dyak\GE24830-PA 418 GE24830-PA 9..394 2..335 614 35.2 Plus
Dyak\GE25902-PA 306 GE25902-PA 1..303 1..340 613 40.3 Plus
Dyak\GE24832-PA 344 GE24832-PA 1..340 1..337 595 36.5 Plus
Dyak\GE25901-PA 373 GE25901-PA 1..324 1..333 568 38.6 Plus

RT10616.hyp Sequence

Translation from 74 to 1273

> RT10616.hyp
MLQNVCRVCASSTDNSKSLKLFNSGACKVLQQINLLTGVLLQCEPGLPDW
MCETCQTDLKSAISFRDRCLRSQKIFEESLVRNEEDTFRSSVRRSARSQR
QRHEDTAPKTPASPLEVMIKLESLSNGDEEDDGIDHLDSCNEADMELAIK
AMSSSTEDDGTTSPVRLKRTRRRGLKKGGKGENRTKVTLPVFFCDQCGNN
ITGKSSFDRHLRKHSGIRPFQCELCPARFLSSGELKGHQVMHTGDRKFQC
RYCDRTYVNYSGRLRHERTHTNDRPFICAQCGKSFTNSYILKNHMLIHTG
ERLFRCELCHRSFARPTHLKTHFRSNTHKHNLEKSMADAGGVQLSPSQSA
DQVKFVTEKEPEAEADAFTIEVPLPAEQEQDESLGLAALETSTLMYSTN*

RT10616.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG8159-PB 399 CG8159-PB 1..399 1..399 2113 100 Plus
ranshi-PA 346 CG9793-PA 5..339 5..335 646 39 Plus
M1BP-PA 418 CG9797-PA 9..394 2..335 636 34.7 Plus
CG11762-PA 312 CG11762-PA 1..309 1..334 613 38.2 Plus
CG8145-PB 370 CG8145-PB 1..324 1..333 596 39.1 Plus