BDGP Sequence Production Resources |
Search the DGRC for RT10665
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 106 |
Well: | 65 |
Vector: | pCR2.1 |
Associated Gene/Transcript | hng1-RA |
Protein status: | RT10665.pep: gold |
Sequenced Size: | 1050 |
1050 bp assembled on 2011-02-04
GenBank Submission: BT126097.1
> RT10665.complete CACTGGTCAATATTAAACATATATTAAACAAATTAAAATGAGCTCAAACC ACCGTCCTCTGGACGATTCGGATATCCTCCTAATACAAACCATCCGCGAG ACGCCGTCGCTGTACGATCCCCAGCTGCCCTCCTTTCGGCTGTCGCAGCG CAAAGAGGAGGACTGGGCAAAAGTGGCGGATTTGCTAAACATCTCCATCT CAGACGCTCGGCGACGGTGGACGTGTCTGCGGGATCGCTATTCGCGGGAG CTTAAGCAGAAGCGCCTGCATCCGTCCGGCGAGTTTGGTCACAATGACTT CTTTCGGAAGATGGACTTCCTGCGGGACTTTGTGCGCAAGAGACGCGAGC GCAGAGGACGCGAACGGGATCGGGAACAAAAGCCAACCGGGTGGATGAAG GTTGATTTACAGCGACGGCGTCGTACCCGCCTGCCTATTGACACAGAGAC CTTGATCGAGGAGCAAGGTTCGCACGCCTACGATGAGGGCGAGGAGCAGC ACGACTACGACGCTAAGCTGGAGTCTCATACCACACAATCGGAGACGTAT TCGGTGGTCGTGGAGGCGGACGATGGGCAGGAGCCCGAACAGGAGAGCTT CGATGAGTTCCTGGGGGATGCGGAGTGCGAGCAAAAGGTCAAGGTGGTCA CAATTCATCCGGAAATCGCTGCTCCGAATGCGACGTCCGCACCTGAGCCT ATTGAGTCTAACCACGCGGATCTGAACTACTTGGTCTGTATGCCGCCCAA TGCGAATCAGGAGCGAGAGCATTCCGCCCCAGAATTACCCAATCCCACGG CCGTCATCACCCAAAAGACTTGCGAAACAGAGGACGACTTCTTTTGCAAG TCGATTGCCGCGTATTTGCGCCAACTGTCGCGCGTGCACAAGATCAAGGC CAAGGTGGAGATGTACCAGATTCTAGAGAAGTACATACTGCTCGAGGAGT GCGGAAAGGGGTCGGGTGCGGGCGGATCAGGCTAAGCAGGTTGCATGCAA TATGTACATAGGTTTTAACATAGTTTTTTAATGCAGTACAAATATACAAG
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17055419..17056467 | 1..1049 | 5185 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21168960..21170008 | 1..1049 | 5230 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21170159..21171207 | 1..1049 | 5230 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17055419..17056467 | 1..1050 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9437-RA | 1..948 | 38..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9437-RA | 1..948 | 38..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
hng1-RA | 1..948 | 38..985 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9437-RA | 1..1049 | 1..1050 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9437-RA | 31..1079 | 1..1050 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
hng1-RA | 31..1079 | 1..1050 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21168960..21170008 | 1..1050 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21168960..21170008 | 1..1050 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21168960..21170008 | 1..1050 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17056465..17057513 | 1..1050 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21170159..21171207 | 1..1050 | 99 | Plus |
Translation from 37 to 984
> RT10665.pep MSSNHRPLDDSDILLIQTIRETPSLYDPQLPSFRLSQRKEEDWAKVADLL NISISDARRRWTCLRDRYSRELKQKRLHPSGEFGHNDFFRKMDFLRDFVR KRRERRGRERDREQKPTGWMKVDLQRRRRTRLPIDTETLIEEQGSHAYDE GEEQHDYDAKLESHTTQSETYSVVVEADDGQEPEQESFDEFLGDAECEQK VKVVTIHPEIAAPNATSAPEPIESNHADLNYLVCMPPNANQEREHSAPEL PNPTAVITQKTCETEDDFFCKSIAAYLRQLSRVHKIKAKVEMYQILEKYI LLEECGKGSGAGGSG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11939-PA | 310 | GF11939-PA | 1..310 | 1..310 | 997 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22095-PA | 315 | GG22095-PA | 1..304 | 1..304 | 1387 | 89.5 | Plus |
Dere\GG13380-PA | 678 | GG13380-PA | 39..130 | 12..105 | 152 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20726-PA | 334 | GH20726-PA | 1..333 | 1..309 | 765 | 50.7 | Plus |
Dgri\GH14617-PA | 770 | GH14617-PA | 99..197 | 12..110 | 152 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hng1-PA | 315 | CG9437-PA | 1..315 | 1..315 | 1662 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20810-PA | 335 | GI20810-PA | 1..328 | 1..309 | 773 | 54.2 | Plus |
Dmoj\GI13504-PA | 728 | GI13504-PA | 90..188 | 12..110 | 162 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10159-PA | 304 | GL10159-PA | 1..304 | 1..315 | 988 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21787-PA | 304 | GA21787-PA | 1..304 | 1..315 | 988 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15812-PA | 313 | GM15812-PA | 1..302 | 1..304 | 1475 | 95.4 | Plus |
Dsec\GM16842-PA | 683 | GM16842-PA | 35..128 | 12..108 | 151 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11570-PA | 313 | GD11570-PA | 1..313 | 1..315 | 1612 | 95.9 | Plus |
Dsim\GD12257-PA | 682 | GD12257-PA | 35..128 | 12..108 | 151 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20543-PA | 330 | GJ20543-PA | 1..330 | 1..315 | 834 | 56.1 | Plus |
Dvir\GJ11865-PA | 706 | GJ11865-PA | 47..147 | 12..111 | 149 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19657-PA | 334 | GK19657-PA | 1..328 | 1..310 | 758 | 51.9 | Plus |
Translation from 37 to 984
> RT10665.hyp MSSNHRPLDDSDILLIQTIRETPSLYDPQLPSFRLSQRKEEDWAKVADLL NISISDARRRWTCLRDRYSRELKQKRLHPSGEFGHNDFFRKMDFLRDFVR KRRERRGRERDREQKPTGWMKVDLQRRRRTRLPIDTETLIEEQGSHAYDE GEEQHDYDAKLESHTTQSETYSVVVEADDGQEPEQESFDEFLGDAECEQK VKVVTIHPEIAAPNATSAPEPIESNHADLNYLVCMPPNANQEREHSAPEL PNPTAVITQKTCETEDDFFCKSIAAYLRQLSRVHKIKAKVEMYQILEKYI LLEECGKGSGAGGSG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
hng1-PA | 315 | CG9437-PA | 1..315 | 1..315 | 1662 | 100 | Plus |