BDGP Sequence Production Resources |
Search the DGRC for RT10714
Library: | RT |
Tissue Source: | D melanogaster pooled RNA |
Created by: | |
Date Registered: | 2006-04-14 |
Comments: | TA cloning vector from Invitrogen |
Original Plate Number: | 107 |
Well: | 14 |
Vector: | pCR2.1 |
Associated Gene/Transcript | CG16813-RA |
Protein status: | RT10714.pep: gold |
Sequenced Size: | 718 |
718 bp assembled on 2011-02-23
GenBank Submission: BT126095.1
> RT10714.complete GTCGTCTCGAAGACAGCAAAGCGAACACCACTACTCTTAATCAAGAATGG ATAACTATAACCACAAGAAATTCACTGGAGCTCTGAAGCGAAAGCGCAGC ATGGATGCGGACTCTGATGACGATGTGGTCTTCATTATGGAACAGCCGGG CCAACGCACTCCAGAGCAGCCGCAGCCTAAGCGTCGCTTCTTCCGACCCT GGATGGATGAGTCTCCGGAAGAGGAGCAACCACAGCCGCCACGTAAGATT GTGGCTACATCGACACCGCCGCCACAACAAGTGGATGGCACCTACCACGC TAACATGGTGCGCAATCACCACAAGCGCCGCCAGCGCAGTCCACAGGAGC AACTGCGTCGGGATCGCAACACCTTGGCCAGCCTGCGCCATCGACGCTCC CAGCAGCAACAGCAGCAGCTCATCGAACAACAATACCTGACCAGTCGCAT TCAGCACGAGGCCAATCTGCAGCAGCAGATCCGCCTGAGTCTCTACTATG TGCGCTTCCTGCAGCAGGCGATGGCCTCCACGGAGCCACTGCCTCCCACA CAGCCAAGGCACATGATGCCGCGCCAACAGACCACCACCCAGCATCCTTG ATGGGTGGACATGGTGCAACGACTGGGCGCTGCTCAATGCGCCCTAACTT ATTGTAGAAAAGCTGAATAGTGATTGTGATTACTTTTAAAGTTTAATTTA TTTATCTGGTTGACTAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13226483..13227197 | 1..715 | 3515 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13227807..13228524 | 1..718 | 3575 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13227807..13228524 | 1..718 | 3575 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6883 | 318..478 | 164 | 61.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6900 | 288..471 | 154 | 57.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2481 | 315..484 | 150 | 59.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6856 | 344..478 | 134 | 59.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2608..2875 | 225..492 | 132 | 54.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6746..6823 | 401..478 | 128 | 65.8 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1052..1146 | 380..477 | 121 | 63.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6802 | 401..478 | 119 | 64.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6847 | 401..478 | 118 | 64.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6799 | 398..478 | 116 | 63.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13226483..13227197 | 1..715 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16813-RA | 1..555 | 47..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16813-RA | 1..555 | 47..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16813-RA | 1..555 | 47..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16813-RA | 1..555 | 47..601 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16813-RA | 1..715 | 1..715 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16813-RA | 1..715 | 1..715 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13227807..13228521 | 1..715 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13227807..13228521 | 1..715 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13227807..13228521 | 1..715 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13227807..13228521 | 1..715 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13227807..13228521 | 1..715 | 99 | Plus |
Translation from 46 to 600
> RT10714.pep MDNYNHKKFTGALKRKRSMDADSDDDVVFIMEQPGQRTPEQPQPKRRFFR PWMDESPEEEQPQPPRKIVATSTPPPQQVDGTYHANMVRNHHKRRQRSPQ EQLRRDRNTLASLRHRRSQQQQQQLIEQQYLTSRIQHEANLQQQIRLSLY YVRFLQQAMASTEPLPPTQPRHMMPRQQTTTQHP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23075-PA | 188 | GF23075-PA | 1..188 | 1..184 | 649 | 77.9 | Plus |
Dana\GF23086-PA | 199 | GF23086-PA | 1..162 | 1..159 | 254 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23825-PA | 184 | GG23825-PA | 1..184 | 1..184 | 797 | 95.7 | Plus |
Dere\GG23826-PA | 192 | GG23826-PA | 6..168 | 3..175 | 281 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25089-PA | 194 | GH25089-PA | 12..175 | 3..169 | 395 | 53.4 | Plus |
Dgri\GH22260-PA | 194 | GH22260-PA | 12..175 | 3..169 | 395 | 53.4 | Plus |
Dgri\GH25090-PA | 200 | GH25090-PA | 10..164 | 2..159 | 248 | 42.8 | Plus |
Dgri\GH22261-PA | 200 | GH22261-PA | 10..164 | 2..159 | 248 | 42.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16813-PB | 184 | CG16813-PB | 1..184 | 1..184 | 981 | 100 | Plus |
CG16813-PA | 184 | CG16813-PA | 1..184 | 1..184 | 981 | 100 | Plus |
CG16815-PB | 192 | CG16815-PB | 6..171 | 3..178 | 320 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17610-PA | 190 | GI17610-PA | 11..163 | 3..167 | 390 | 56.5 | Plus |
Dmoj\GI17611-PA | 198 | GI17611-PA | 6..162 | 2..159 | 276 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26308-PA | 193 | GL26308-PA | 1..187 | 1..183 | 615 | 69.3 | Plus |
Dper\GL26309-PA | 177 | GL26309-PA | 11..141 | 14..159 | 152 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14163-PA | 193 | GA14163-PA | 1..187 | 1..183 | 615 | 69.3 | Plus |
Dpse\GA28811-PA | 184 | GA28811-PA | 1..148 | 1..159 | 180 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10279-PA | 184 | GM10279-PA | 1..184 | 1..184 | 922 | 96.2 | Plus |
Dsec\GM10290-PA | 192 | GM10290-PA | 5..168 | 2..175 | 275 | 43.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23874-PA | 184 | GD23874-PA | 1..184 | 1..184 | 936 | 97.8 | Plus |
Dsim\GD24073-PA | 98 | GD24073-PA | 1..98 | 87..184 | 460 | 96.9 | Plus |
Dsim\GD23875-PA | 192 | GD23875-PA | 5..168 | 2..175 | 281 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17955-PA | 182 | GJ17955-PA | 9..167 | 3..175 | 390 | 57.5 | Plus |
Dvir\GJ17956-PA | 207 | GJ17956-PA | 15..171 | 3..159 | 254 | 43.2 | Plus |
Translation from 46 to 600
> RT10714.hyp MDNYNHKKFTGALKRKRSMDADSDDDVVFIMEQPGQRTPEQPQPKRRFFR PWMDESPEEEQPQPPRKIVATSTPPPQQVDGTYHANMVRNHHKRRQRSPQ EQLRRDRNTLASLRHRRSQQQQQQLIEQQYLTSRIQHEANLQQQIRLSLY YVRFLQQAMASTEPLPPTQPRHMMPRQQTTTQHP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16813-PB | 184 | CG16813-PB | 1..184 | 1..184 | 981 | 100 | Plus |
CG16813-PA | 184 | CG16813-PA | 1..184 | 1..184 | 981 | 100 | Plus |
CG16815-PB | 192 | CG16815-PB | 6..171 | 3..178 | 320 | 44.5 | Plus |