Clone SD01132 Report

Search the DGRC for SD01132

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:11
Well:32
Vector:pOT2
Associated Gene/TranscriptCG3251-RA
Protein status:SD01132.pep: gold
Sequenced Size:1673

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3251 2008-04-29 Release 5.5 accounting
CG3251 2008-04-29 Picked prior to 5.5
CG3251 2008-08-15 Release 5.9 accounting
CG3251 2008-12-18 5.12 accounting

Clone Sequence Records

SD01132.complete Sequence

1673 bp assembled on 2007-11-15

GenBank Submission: BT031300

> SD01132.complete
CTTGATTTAACTTTTATTTAAGTACCCAGTACTAAAATATTTTACCCAAC
AATAATGTCCGAAGTATTGCAGCGCTTGGCTTCCACTGAAGTTAGAAAGG
CAAGAGATCCAATAGATCGGTTCCTGGAGCGACGTCAACTCTTTCGGAAG
CATATGCTAGGGGATGCCTCGAGTCTGTTTCGAGTGGTCGCTGAGCAGGT
GTACGACACCCAGATGCTTCATTACGAAGTGAGGATGGAGTGCGTTCGCT
ATATGTTCACGAAATGGAAGACCTTCCGGCGATTTGTGAGTGGAGACTTC
GACGAGTACTTGTGGCATTTGGGCAAGACCAAGACGGCGGGCACCATACT
GGAACTGGGTGCCATGTGCCACCTGTACCGCCGCAATGTCATCATCTACG
AACCCTTCGATATGGGCCGGATGGTCACCTACAACAAGGACTACAAGGAG
ATCCTACGTATCTTTATGAACAGCATGGGGCATTTTGAAACCGTGCTGAC
TATGCAGGACGTCGATATGGCCGCCGTTTGCCAGTCTGTGTCCTTCAAGA
TGCTTTACAAGCACCTGTTCCGCCTGCCAGATGTTGATCTCGCTGTGGAA
TGGATGCTGTATCCAGATACCTTCAAAATGGGCACTGAATATGAGTTCGA
CTCGCGCGGCCGCGCCATCCGTTTGCTGTGCCGCAACGGACGAAGCTTCA
AGCTGGATCGCCCTGAGAGCACCATTTGCTTGCTTGAAAACTCCCAGATG
TGCCCGTTTCATAATCGCAGGCTAGCAATGGGCGGACAGTTTGCCGACTT
TTCCTGCATGCGGATCCTTCTGGAGGAGAACAACATTCCCTTCTCCTATT
TGGTAGCCAAGTCAATGGATCCCTGTAGGTATCGTAACGTGGAGCTGACT
AGCGCGATTGAAGCTCGTCGTGAAGCGTATGAATTTGGTATTTACATAGG
CGACTATAACTTCAAGGTGGGAGCTAAGTGCCAGGTGCAGTTGGATACCA
ATAGACGCGATCTGCTCAGCGCTTGTTACATCCAATCGATCGATAAGAAG
AAGTCCGTTTGTAAAGTGTTTATCGAGGAGCAGGGAAAACTGGTTGATGT
GCCCTCCGATAATCTACATCCACTGCCACCAGATGAATTCAAGGCCTGGG
ACTTTGCTCGCAAGCGGCCCCAACGTCTCCACAATAGCCAAATGGGGAGA
CAGTCGGTACAAGGTGATCAGCAAGGATTCGTCCCTGACCCGATGCCTGG
TACGGCTCCCTCGATGCCACCACCACCGGTGGCCGATCCTCGTCCGGTTA
ACGTAACAGCACAGCAGCCACCTGTTTTCGGGCCCTCTAGATGGATGGAA
CCCACCCGGCCGTTGATGCCTAATCCTTTGATGATACATCAGACAGGATC
GTTCGTTTTCGTCCAACAACCACGAGTTGGTCCGCCGTCGGTCATGATGC
ACGTTTTGATAATTGTACACAACGCACCATACATGCTTGCGTTTGATCAT
GCCCCCCACCCGCCTGCACCCCAGTGCACTGCCCCATTTTAATATATTTT
TTTCTTGTTTTTACAAATATGTCAATTTAAATATTTATATTTAACATGTT
TAACATGTCGAAAATCAGAATAAAACGTGAAAAACAGAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA

SD01132.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:36:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG3251-RA 1708 CG3251-RA 72..1708 1..1637 8185 100 Plus
otu-RA 3126 otu-RA 286..375 161..250 195 81.1 Plus
otu.a 3151 otu.a 185..274 161..250 195 81.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 4688091..4689630 1637..98 7700 100 Minus
chr2L 23010047 chr2L 4689684..4689780 97..1 485 100 Minus
chrX 22417052 chrX 8380421..8380510 250..161 195 81.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:44:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:31:29
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4688962..4690504 1640..98 7715 100 Minus
2L 23513712 2L 4690558..4690654 97..1 485 100 Minus
X 23542271 X 8488636..8488725 250..161 195 81.1 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:33:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4688962..4690504 1640..98 7715 100 Minus
2L 23513712 2L 4690558..4690654 97..1 485 100 Minus
2L 23513712 2L 10947965..10948019 1619..1673 215 92.7 Plus
3L 28103327 3L 6881640..6881694 1619..1673 215 92.7 Plus
3L 28103327 3L 19849767..19849821 1673..1619 215 92.7 Minus
2L 23513712 2L 7344346..7344399 1619..1672 210 92.5 Plus
X 23527363 X 8496734..8496823 250..161 195 81.1 Minus
3R 31820162 3R 25574543..25574593 1619..1669 195 92.1 Plus
Blast to na_te.dros performed on 2019-03-15 23:31:29 has no hits.

SD01132.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:32:08 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 4688193..4689630 98..1535 100 <- Minus
chr2L 4689684..4689780 1..97 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:56:06 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
CG3251-RA 1..1488 55..1542 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:07:06 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
CG3251-RA 1..1488 55..1542 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:50:46 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
CG3251-RA 1..1488 55..1542 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:53:21 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
CG3251-RA 1..1488 55..1542 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:38:53 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
CG3251-RA 1..1488 55..1542 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:03:34 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
CG3251-RA 50..1591 1..1542 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:07:06 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
CG3251-RA 49..1685 1..1637 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:50:46 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
CG3251-RA 49..1685 1..1637 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:53:21 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
CG3251-RA 50..1591 1..1542 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:38:53 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
CG3251-RA 49..1685 1..1637 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:32:08 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4688965..4690504 98..1637 100 <- Minus
2L 4690558..4690654 1..97 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:32:08 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4688965..4690504 98..1637 100 <- Minus
2L 4690558..4690654 1..97 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:32:08 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4688965..4690504 98..1637 100 <- Minus
2L 4690558..4690654 1..97 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:50:46 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4688965..4690504 98..1637 100 <- Minus
arm_2L 4690558..4690654 1..97 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:59:23 Download gff for SD01132.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4688965..4690504 98..1637 100 <- Minus
2L 4690558..4690654 1..97 100   Minus

SD01132.pep Sequence

Translation from 54 to 1541

> SD01132.pep
MSEVLQRLASTEVRKARDPIDRFLERRQLFRKHMLGDASSLFRVVAEQVY
DTQMLHYEVRMECVRYMFTKWKTFRRFVSGDFDEYLWHLGKTKTAGTILE
LGAMCHLYRRNVIIYEPFDMGRMVTYNKDYKEILRIFMNSMGHFETVLTM
QDVDMAAVCQSVSFKMLYKHLFRLPDVDLAVEWMLYPDTFKMGTEYEFDS
RGRAIRLLCRNGRSFKLDRPESTICLLENSQMCPFHNRRLAMGGQFADFS
CMRILLEENNIPFSYLVAKSMDPCRYRNVELTSAIEARREAYEFGIYIGD
YNFKVGAKCQVQLDTNRRDLLSACYIQSIDKKKSVCKVFIEEQGKLVDVP
SDNLHPLPPDEFKAWDFARKRPQRLHNSQMGRQSVQGDQQGFVPDPMPGT
APSMPPPPVADPRPVNVTAQQPPVFGPSRWMEPTRPLMPNPLMIHQTGSF
VFVQQPRVGPPSVMMHVLIIVHNAPYMLAFDHAPHPPAPQCTAPF*

SD01132.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:53:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23928-PA 599 GF23928-PA 1..496 1..486 1034 45.6 Plus
Dana\GF22579-PA 771 GF22579-PA 37..432 5..365 908 45 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24359-PA 455 GG24359-PA 1..449 1..475 1631 65.3 Plus
Dere\GG19044-PA 852 GG19044-PA 1..397 1..365 921 45.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12503-PA 913 GH12503-PA 1..424 1..385 893 41.5 Plus
Dgri\GH13741-PA 319 GH13741-PA 16..314 18..365 545 37.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG3251-PA 495 CG3251-PA 1..495 1..495 2658 100 Plus
otu-PC 853 CG12743-PC 1..409 1..382 921 45.7 Plus
otu-PB 853 CG12743-PB 1..409 1..382 921 45.7 Plus
otu-PE 811 CG12743-PE 1..367 1..382 778 41.3 Plus
otu-PD 811 CG12743-PD 1..367 1..382 778 41.3 Plus
otu-PA 811 CG12743-PA 1..367 1..382 778 41.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14856-PA 896 GI14856-PA 1..417 1..382 950 45.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20244-PA 856 GL20244-PA 10..412 7..385 920 45 Plus
Dper\GL15984-PA 367 GL15984-PA 19..363 17..359 809 46.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:53:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26950-PA 856 GA26950-PA 8..394 5..366 918 46.5 Plus
Dpse\GA26104-PA 367 GA26104-PA 19..363 17..359 810 46.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:53:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18078-PA 420 GM18078-PA 1..394 1..393 1726 81.2 Plus
Dsec\GM21279-PA 472 GM21279-PA 1..211 1..210 581 51.7 Plus
Dsec\GM21279-PA 472 GM21279-PA 195..276 294..382 155 37.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:53:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22696-PA 519 GD22696-PA 1..515 1..490 1866 73.2 Plus
Dsim\otu-PA 452 GD24569-PA 2..89 288..382 201 43.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:53:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19517-PA 864 GJ19517-PA 12..427 1..383 976 45.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:53:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19888-PA 955 GK19888-PA 2..414 1..382 979 46.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:53:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14692-PA 495 GE14692-PA 1..494 1..488 1668 67.1 Plus
Dyak\GE17448-PA 853 GE17448-PA 1..397 1..365 922 45.5 Plus

SD01132.hyp Sequence

Translation from 54 to 1541

> SD01132.hyp
MSEVLQRLASTEVRKARDPIDRFLERRQLFRKHMLGDASSLFRVVAEQVY
DTQMLHYEVRMECVRYMFTKWKTFRRFVSGDFDEYLWHLGKTKTAGTILE
LGAMCHLYRRNVIIYEPFDMGRMVTYNKDYKEILRIFMNSMGHFETVLTM
QDVDMAAVCQSVSFKMLYKHLFRLPDVDLAVEWMLYPDTFKMGTEYEFDS
RGRAIRLLCRNGRSFKLDRPESTICLLENSQMCPFHNRRLAMGGQFADFS
CMRILLEENNIPFSYLVAKSMDPCRYRNVELTSAIEARREAYEFGIYIGD
YNFKVGAKCQVQLDTNRRDLLSACYIQSIDKKKSVCKVFIEEQGKLVDVP
SDNLHPLPPDEFKAWDFARKRPQRLHNSQMGRQSVQGDQQGFVPDPMPGT
APSMPPPPVADPRPVNVTAQQPPVFGPSRWMEPTRPLMPNPLMIHQTGSF
VFVQQPRVGPPSVMMHVLIIVHNAPYMLAFDHAPHPPAPQCTAPF*

SD01132.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:15:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG3251-PA 495 CG3251-PA 1..495 1..495 2658 100 Plus
otu-PC 853 CG12743-PC 1..409 1..382 921 45.7 Plus
otu-PB 853 CG12743-PB 1..409 1..382 921 45.7 Plus
otu-PE 811 CG12743-PE 1..367 1..382 778 41.3 Plus
otu-PD 811 CG12743-PD 1..367 1..382 778 41.3 Plus