BDGP Sequence Production Resources |
Search the DGRC for SD01241
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 12 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9328-RB |
Protein status: | SD01241.pep: gold |
Preliminary Size: | 1895 |
Sequenced Size: | 1660 |
Gene | Date | Evidence |
---|---|---|
CG9328 | 2001-01-01 | Release 2 assignment |
CG9328 | 2001-11-09 | Blastp of sequenced clone |
CG9328 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9328 | 2008-04-29 | Release 5.5 accounting |
CG9328 | 2008-08-15 | Release 5.9 accounting |
CG9328 | 2008-12-18 | 5.12 accounting |
1660 bp (1660 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069770
> SD01241.complete AGCGTGCGCGTACGGTGCTTTCCTCGCATGAAGAGTAAAAACAAATTAAA TACCATTGTGGAATAACATCTCAGCGAACGAGTATACGTCGGAAACCGAT TTGTCGCGCTAAGTAACACGAGATGCTTTTGGGATTCAAAAAAACCCATA TTTATGTGATGATATATTAATGTAAACCCACTGTTTCGTTTACATTTTCG TTTTTGAATGACTGGCTGCGGAAATAACTATAGATTCGCGAAAGTACACT AAATCAGGCAGTAAAATCGGATTGGCAATCTTGGGAAAAAATCGAAGGAA AAGAGACGCCAGCAGCTTCCTCGGATTGTTTTGTTGTTTTCAGTTCGTTA GTGTGTGGCCGTTTTTCCGCCTGTGTTTGTGCAACAAAGTCAAAGTCGTC GAAGCTGCTGCAAAAATACGTGAAATGCAAATTGTGAAAAAGTTGCAAAA GCAACAACAGCAACTAGCAACAACCAACAACAACGCAACGACAACTATAA CCGCAATCACACGGCCAACGCAACAATAACAACGGCAACAACAAAACGGC TTCGCGTGTTTTAAAAAATTGCATTGCAAATTGCCGAGCAGCAACAACTA AAACAATAGCAATAAAAAAAAAGGAAAATTGCGCGCCAAAAGCGAAAGAA ACAAAAGGATTACACATAAACAAACCGAAGAAGCAGAAGCAGCTGAGCGA AAGAGAGAGATAGCGAAAAATCAAAACAGAACAGGCAGAAATCCCTGTTT ATCCACCTTCACCTCCGGCGACACCCCCCGTCGTGATACGGCATTCAGGC ACAGTCTGGCGGACGCTGACAACGCGGCCGGAACGATGATGTCCATGACC AGCTCCCCGCCGGCCACACCCACTGGCGTCCAGACGGACTCCGACGGGCT GATCCTGCCTAAGAAGCTCATCAATCCCTGCATGGAGAACATCGATCGCA AGGAGTTGCACCGGGAGCTCAAGTTCAATGCCAGAGTGGGAAAGAGCGTG CTGAACCAGAAATCAGAATTGCAACGTGCCTACGACAAGCAAAAGGAGCG GCATGCCGCGGCCGAGCAACATTCGCCGGATGCGGACATTGTCGGCGGGA TTCCAGGACTGAAAGGAGAACTCGGGCGCGTGATCATGGAGCGGGCGCAG AAGCATGAGGCGGCGGCTCAGAAGCAGGATCAGGAGGACGCCGAGGAGCG GCAGTACGTGAATCCCGAGTATCTGAACGTGCGGGCCAAGCTGCGCACGG CGCACGCCAACAATTAAGGAGCAGCCCACTCGGATACCCCTCATCCTGTA ATCCTCAGCCTATTTAATGTTTAGTTTTAGTAAGAGACCTAACCAAATTA TGTGTAAGGAAACCATGTGTTTTATATGTTAACTTTGTGAGCGGTTTTCA TTTTGATATTATGCAAAACTAGAGTTGATTATTATAATTAAAAATGTACA CCTAGACTAAGCCATTTACTTGTTTAGTTTGTTAGTCCTTATCTCTAATC TAAGTTGAAGCTTTCTTGCGCTAAATTCGTTGTGTATAAACCAAGTGTAT AAAGTTTTAGTTTCTAAAAGGACCCCATTTCTTCCAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9328.d | 2002 | CG9328.d | 663..1682 | 590..1610 | 4915 | 98.9 | Plus |
CG9328-RB | 1677 | CG9328-RB | 663..1677 | 590..1605 | 4905 | 99 | Plus |
CG9328.c | 1483 | CG9328.c | 469..1483 | 590..1605 | 4905 | 99 | Plus |
CG9328.d | 2002 | CG9328.d | 74..655 | 1..582 | 2865 | 99.4 | Plus |
CG9328-RB | 1677 | CG9328-RB | 74..655 | 1..582 | 2865 | 99.4 | Plus |
CG9328.c | 1483 | CG9328.c | 113..461 | 234..582 | 1715 | 99.4 | Plus |
CG9328.c | 1483 | CG9328.c | 1..112 | 1..112 | 545 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20796227..20797010 | 1..785 | 3725 | 98.6 | Plus |
chr2L | 23010047 | chr2L | 20811937..20812534 | 988..1585 | 2960 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 20811659..20811862 | 785..988 | 1020 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20797731..20798514 | 1..785 | 3710 | 98.5 | Plus |
2L | 23513712 | 2L | 20813433..20814055 | 988..1610 | 2995 | 98.7 | Plus |
2L | 23513712 | 2L | 20813155..20813358 | 785..988 | 1020 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20813433..20814055 | 988..1610 | 2995 | 98.7 | Plus |
2L | 23513712 | 2L | 20797731..20798312 | 1..582 | 2865 | 99.4 | Plus |
2L | 23513712 | 2L | 20813155..20813358 | 785..988 | 1020 | 100 | Plus |
2L | 23513712 | 2L | 20798320..20798514 | 590..785 | 910 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6705..6890 | 569..775 | 131 | 58.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20811660..20811861 | 786..987 | 100 | -> | Plus |
chr2L | 20796227..20796671 | 1..445 | 99 | == | Plus |
chr2L | 20796771..20797010 | 545..785 | 95 | -> | Plus |
chr2L | 20811937..20812534 | 988..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9328-RA | 62..543 | 786..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9328-RA | 62..543 | 786..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9328-RA | 62..543 | 786..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9328-RA | 62..543 | 786..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9328-RA | 62..543 | 786..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9328-RB | 1..1584 | 1..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9328-RB | 15..1598 | 1..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9328-RB | 17..1600 | 1..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9328-RB | 1..1584 | 1..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9328-RB | 17..1600 | 1..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20797731..20798514 | 1..785 | 98 | -> | Plus |
2L | 20813156..20813357 | 786..987 | 100 | -> | Plus |
2L | 20813433..20814030 | 988..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20797731..20798514 | 1..785 | 98 | -> | Plus |
2L | 20813156..20813357 | 786..987 | 100 | -> | Plus |
2L | 20813433..20814030 | 988..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20797731..20798514 | 1..785 | 98 | -> | Plus |
2L | 20813156..20813357 | 786..987 | 100 | -> | Plus |
2L | 20813433..20814030 | 988..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20797731..20798514 | 1..785 | 98 | -> | Plus |
arm_2L | 20813156..20813357 | 786..987 | 100 | -> | Plus |
arm_2L | 20813433..20814030 | 988..1585 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20797731..20798514 | 1..785 | 98 | -> | Plus |
2L | 20813156..20813357 | 786..987 | 100 | -> | Plus |
2L | 20813433..20814030 | 988..1585 | 99 | Plus |
Translation from 835 to 1266
> SD01241.hyp MMSMTSSPPATPTGVQTDSDGLILPKKLINPCMENIDRKELHRELKFNAR VGKSVLNQKSELQRAYDKQKERHAAAEQHSPDADIVGGIPGLKGELGRVI MERAQKHEAAAQKQDQEDAEERQYVNPEYLNVRAKLRTAHANN*
Translation from 835 to 1266
> SD01241.pep MMSMTSSPPATPTGVQTDSDGLILPKKLINPCMENIDRKELHRELKFNAR VGKSVLNQKSELQRAYDKQKERHAAAEQHSPDADIVGGIPGLKGELGRVI MERAQKHEAAAQKQDQEDAEERQYVNPEYLNVRAKLRTAHANN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20886-PA | 181 | GF20886-PA | 38..180 | 1..143 | 725 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21255-PA | 180 | GG21255-PA | 38..180 | 1..143 | 764 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14357-PA | 175 | GH14357-PA | 36..175 | 1..143 | 616 | 81.9 | Plus |
Dgri\GH10585-PA | 175 | GH10585-PA | 36..175 | 1..143 | 616 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9328-PB | 143 | CG9328-PB | 1..143 | 1..143 | 735 | 100 | Plus |
CG9328-PA | 180 | CG9328-PA | 38..180 | 1..143 | 735 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23121-PA | 176 | GI23121-PA | 37..176 | 1..143 | 629 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18521-PA | 181 | GL18521-PA | 39..181 | 1..143 | 690 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21705-PA | 181 | GA21705-PA | 39..181 | 1..143 | 690 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23372-PA | 180 | GM23372-PA | 38..180 | 1..143 | 764 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24282-PA | 180 | GD24282-PA | 38..180 | 1..143 | 764 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23631-PA | 181 | GJ23631-PA | 37..181 | 1..143 | 602 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15434-PA | 185 | GK15434-PA | 52..185 | 14..143 | 594 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12349-PA | 180 | GE12349-PA | 38..180 | 1..143 | 764 | 100 | Plus |