SD01284.complete Sequence
4956 bp (4956 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061569
> SD01284.complete
GTTGAGGGTTGCATCCAAATCCGCCACAGATACGGATACATATCCTCAAC
CACTGGCACCCAGCCAGCTGAAGCGAGAACAAACCAAACTTTAATGGCAG
TCAACCCAACATTACAATCAACAAACCGAAACGAAGTGACTGAACCCAGT
GAAAGAAAAGTTTGAAAATGTTGCTTTAAGTTCCCTTCCAAGTTTTGCTA
CAGATTTTAGAAATCCATACTACTATAATAATATTATTAAACAATAATTT
TATATCGTCATCATGTAATATTTCATGAATACGCCAGGTATTTTTCCTCA
GTGCTTGGAGCAAGGAAAACTTATTCCTGGTTGAAAGCTTTCAAAGCTGA
ATTTTCTACGCCCCCTTCCCCTACCCGTCAATTTTTCCCCTCAGGCTCCC
CCAAAACGAGCGGATAGCCAAGAATTCTAATAAATGTCAGACGAGGACGC
TCCCCAAAAGCAAATTCCTTTTGATGAACTAGAAATTGTGCACGTGCAAA
GCCAGGACACGGTCGGCAATCGGAGGACGAGACGGTCGAGATGGATGAGT
GAGTTCCCGGCCGAGGACTCGGCGCTCGGCGCTCGGAACAACCCCCAAAA
GCAAATGTTGGGGTGTGTCGGAGTTAACGAGTTCAAATGTATTCATGAGC
CGGATCTTACCAGCCAGCTGGCTGCTATGTGGGAGGTGTCGCATGGGGGA
GCCCCAGCCCGCTGCCAAAGTCCTCCCCCTCTCGAGGATTTGGCTTCCTG
CCAGCTGCGAGGGTTGCCTGTGCCTGTGACTGTTCCATTGCCTTTGCAAC
CCGACTTTCCTGACTTATTGCCTCGCGGTCATGTGGGAGGATGTGGCTCG
GCTAAAAGGCCCTCCTCCACTCAATGTTTTGCAATTTGCAGGTGTTTTCA
TCATCAATTTCGACCAGCTGTAGACATTTTTGAACAAGCCAACAGGCTCA
GGGCAATACATTCGTGATTCAAATATATTGTACTTTTAATTACAGTATAT
AATTTGAACATATATATATCTCAGTGCTATGTTATAACAAATTAGTGGTC
GGTCAAGTTCGGAAATGTGTTTGTGTGAAAAGTGCGTAATCTCCAAGGAA
AAAAATGGAAGAGAAACAAACACTTCGCACCAAATGAGGTGGCAACAGGC
CATCTCTGGACAGGCCGTCTCTGATGTTGTCCAGAAGTTGGTTTGCCACA
TTAAAAACGATCAGACAATCCGCAGACCAGTTGATCGAACTATATAAAAT
AAAATATTTCCACATAGATTTTCCAAATAAAGCGAATGCGGGCAATATCA
GTGGCGGCTCGTTAAAAGTGTGTGGGGCGTATTGATAGCACCTTGAGGGT
CTGGGTCCCATCAATTCTCGTGTCTAATTTAGTGGCAGTTGGTGCCGCAA
CAAATCGCCTTCATTAGGCTCACAAATCGCTTGCTTATTGGCACGCCACT
CTGTTCAAAATTTATGTGAATTTATTACGGCCTAAAAAGTGAGTGCAAAT
TGTGCAAATGCGCCCATTCAGTACAGTAGTTAACAGCAATGGCCGCCCCG
CTGAGCTGACCATCCATGACAATGATCGTTATGGGCTTCCCCTCGATCTT
CCCGACCTCTTCCAGCTGCGTCCGAGGTGTTGTCGTACTGGGGAGTGTGG
CCAACGAGGCCGCGACCAAAGTGGGCTTAAATGAAGCGATTTCTTGGCCC
GGCCAACGATCTGTTATAAATTGATCGCGGGGCCAAGTGAACTGCTGTTG
GTTGAAGGATTCTATTACCACTTCATGGGGATATTAAGTTGGCCTAATCA
GGTAATGAGAGTAAGTGTGAAGTGGATACAAATATCTGTTTGATCATTTG
GGGAGTATGTTTAGGTCTAATTATATACTGACAATAAACATAAACGTTAT
TATTAATGAAGTTATGAATAAAATTGGTTTGTATACACGAAAAACACAAA
CTTTCTACCACTTCAATCCATATGCCCTGCCAATCAGAGGTGCCACGAAG
CTTTTTATATATTTTCCCCGTTTTCGGCGTATTTCGCTTTATTTATCTGG
CGCATAAATAAAATATTTTCGGTACTCGCTGGTCAGCTGTTTCCCATCAA
CGATTCCGATTCCCATGGGTTGTCTGCAGACTCTACTCTATCTGGTTCTA
TCACCTCCGCGGGTCTTCGCAGTGGAAGCAGCATAAAGAAGCGCTAATGT
TGCATTAAATTCAGCTGAAATCAACTGTTAAGTGGCTTTCAGTGAGCTAT
TTAATTCTCGAACACCCAAAAAGAGCAAAGGCGATTCAGAAGCGGAATTT
CATAAATAAATGTGCGTCTGCGATCCGAACTTGATTTACTTGCGCCTGAA
AATCCGAATGGCATGCAAGGGTATATGAGTTCTCTGTTTTTTAGGGGCAA
GTAAATAACATAGAGGATGTTGTGCTTTGAGCAATTATGATTGTGTTTTG
GCAGGCCGAGTTTTGAGCAATCTGTGAAATTCTACAAAATTCTGGCAGCT
GTTGAGGAAGTATATTAAATTCGATTGAAATGTGGTGTGGGAATTTTTAT
ACATCCGGTGGGCTATGAAAAGTAATATACTGAAATTACAAACATCAATT
TGACCTTCCATTACCTCTCTGTGATGTAAGATTGTGCTATCTTGTTCTCA
GGCCTTTTTCTATCTTCCCAGCTAACTTTCAACCTTTCCAAGTCGACCCA
AAACCCCGAAAACAGAGGTCAAAAGATTGCCAACCTCTGCGTTGCCTTCT
CCGTATGCAAATCTCAAGTGAACGGATCGGATCGATGAGGCCGCAAAAGA
GGTCGTCAATTGTGGCTCCTCGCATCCGCAGAAGAACAACTGCCTCCTCA
AGCCCAAAGGCATGTCAGTATTTCGTCAAAAGACACATGTTGTCGTCGAG
ACAGAGCCCCAGAGTCAGAAGACAAAAGGCGGAGACAGGCGATTCTAACG
AGAATAATATAGTTCTCCATTCTCTTTATTTATATTTATGGCGGTCGACG
AAAGGCTTCTTAGAAAATGCATAAAACCTGCGCCAAGACAGCCCCACATG
CTACGTAGACTGTGGCCAAATGTGCACGAACGATTGACTGTCGTGAAGCT
TCGTTTAAATGCGTTTTTAATTAATTATGCGACGCGCGTGCCACATGCAA
CGTGCTGCAAGGGGGGACACATCGGGCCAACTTCAGTGACAACACACGAT
CGACATCAAAATGCAGACATCGAGCGGGGAAGTCGTAAAAATGCGGCAAG
AAATTTTCAAATTTGTAAAACGCTAAAAATTCCCAAAACGCAGCCATATC
TTCTGGATGCAGAGAAAACAATTAGGAACACAAAAAGTAAGAAGTAAATT
CTGAAAACCATTACTTTTACTTTTAAATGTGTAACTTAAAAACGAGAATA
TTTATATTTCGGTGCAAGAATGCCATATAGCACTTAGTTAATATTTGAGC
TTCGCATTTAGCTTTAGTTCGTTTTTACCGTGCACATTCCCCTAACCCCT
TGGTGCCCCCTTTGGTAGCCGGCCACGCATGTGTTAATCTGCGTGGAGCA
CAATTAATTTTCTGCAAATGCCTGGCAGGCAGCATCACTGAACCCAACAA
TGCGCCTCGAGAGATCTCGGGACTTATATATTTTATTAATTACGCTCAAG
TGCTCTGGAAGGGAATGCGCGAGGGGGAGAGGGGGTGCTCCGCCGGGGCT
AATTACTGAAAAATTGGCAGTTGTCGTTGATTTTATGGTAAATTATTTGT
CAGCAAGATGGAAGATGGCCAATGGAAGACGCCAACTGCCGACGACCGGC
GACTCTTCAAATGTCTGTCTTTAAGGAGTGGGCAAGTGGTGGGCTGCGAG
GGGCTTAGGGGGCCTGCCTAGACAGATTTATGGCTGGCATTTGAAAGTTT
ATGTATAACCAAATGCGGTTTTGATTTTAGTTGCAGTTTGGCTGAGCCGA
AGCAGCTGCTCCGGGAAATGGAAAGAAATCGTGTTGGAAGGGACTGCTGC
CACATCGATCAATTGCAGATATAATAAAAAATAGTTCTTTGACCAAGTAT
TATATGAATAAGAGTTTCGACTCTTCTATTTGGAGTTATCTAAGAAATAA
ATTCCGATGTTCCGTCCTCTTAATTTTAATGTATCATCCTCATCCAAACA
AATGAAGCTATGCTCCATGTGATAGCCACTAAATCAACCAGATCACGCAC
TTGAAATAAAACTGTCAAAGATCTGTGGGGAACATCTAGTTCTGGCCGCA
GATAGAATCGAACAGAACCTGAAACTCACTTTAGCTTAACCTTTCCCATC
CTATAAATACCCATAACGATTTGAGGCGACATCGAAGGCAGTTGCCCGTG
CTAATTTATAGATAGATTCGATGGGCTGGGGTCTCGGGTAAACAAACTGC
AGTCTATTGGGGGCCACCCAAAGTACCCGAGTGCCGGATAGTCATTAAAA
GCGACTCGAGTCGGAGTTCTTTTTATGATAGCCACTAATCAGAGGCATAC
TTTGCATATTTCAACTAATTTTCATTAGCCGAATGGCTTTGTGTCTCCCT
GATTTTTATGGACACGGCCACAAATTTTAGTTAGTGTGGCTAAACACAAA
TGCGCTATAAATTGTCGGCTGATTAGTGCAACAATCTCAGGGTCATAAAA
CTTAATAAAAACCCATATAGACCCAAAATGCAGCTGGCAAAGGATCCGCT
AGTTAACACTCGAATGTATCCCATAGATACACAAGCGAACGACCATAAAA
ATCAAATTGCAATGTCTAAACGACTGTAAGCGGCTAATTTTGCACAAGTT
AATAAATTTGTTTCCCCGTTTCTTCTGGTTTCCTTCGGCGGAGTCGCAGG
CACACAGATCGTGCTCCAAAAGCTGATCTTCATATTTAGTAAGCTGCAAA
TTATTACCACAATTTCCAGACGCAATTTGCCAAAAAAGAAAAAAAAAAAA
AAAAAA
SD01284.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 16:24:19 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:49:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 796663..801576 | 11..4938 | 23605 | 98.7 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:44:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:49:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 796918..801849 | 11..4956 | 23635 | 98.7 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:12:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 798803..801849 | 1908..4956 | 14685 | 98.8 | Plus |
3L | 28103327 | 3L | 796918..798803 | 11..1896 | 9130 | 98.9 | Plus |
Blast to na_te.dros performed on 2019-03-15 14:49:18 has no hits.
SD01284.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:50:29 Download gff for
SD01284.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 796663..801569 | 11..4931 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 13:43:55 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed on 2008-07-21 13:43:55 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:50:29 Download gff for
SD01284.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 796918..801831 | 11..4938 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:50:29 Download gff for
SD01284.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 796918..801831 | 11..4938 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:50:29 Download gff for
SD01284.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 796918..801831 | 11..4938 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:43:23 Download gff for
SD01284.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 796918..801831 | 11..4938 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:43:23 Download gff for
SD01284.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 796918..801831 | 11..4938 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:43:23 Download gff for
SD01284.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 796918..801831 | 11..4938 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:34:50 Download gff for
SD01284.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 796918..801831 | 11..4938 | 98 | | Plus |
SD01284.pep Sequence
Translation from 433 to 966
> SD01284.pep
MSDEDAPQKQIPFDELEIVHVQSQDTVGNRRTRRSRWMSEFPAEDSALGA
RNNPQKQMLGCVGVNEFKCIHEPDLTSQLAAMWEVSHGGAPARCQSPPPL
EDLASCQLRGLPVPVTVPLPLQPDFPDLLPRGHVGGCGSAKRPSSTQCFA
ICRCFHHQFRPAVDIFEQANRLRAIHS*
SD01284.pep Blast Records
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 00:19:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19363-PA | 163 | GM19363-PA | 1..110 | 1..107 | 478 | 85.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 00:19:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13572-PA | 91 | GD13572-PA | 13..91 | 99..177 | 357 | 88 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 00:19:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE18023-PA | 158 | GE18023-PA | 1..158 | 1..166 | 347 | 52.9 | Plus |
SD01284.hyp Sequence
Translation from 433 to 966
> SD01284.hyp
MSDEDAPQKQIPFDELEIVHVQSQDTVGNRRTRRSRWMSEFPAEDSALGA
RNNPQKQMLGCVGVNEFKCIHEPDLTSQLAAMWEVSHGGAPARCQSPPPL
EDLASCQLRGLPVPVTVPLPLQPDFPDLLPRGHVGGCGSAKRPSSTQCFA
ICRCFHHQFRPAVDIFEQANRLRAIHS*
Sequence SD01284.hyp has no blast hits.