Clone SD01505 Report

Search the DGRC for SD01505

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:15
Well:5
Vector:pOT2
Associated Gene/Transcriptp115-RA
Protein status:SD01505.pep: gold
Preliminary Size:2816
Sequenced Size:2774

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1422 2001-01-01 Release 2 assignment
CG1422 2001-09-19 Blastp of sequenced clone
p115 2008-04-29 Release 5.5 accounting
p115 2008-08-15 Release 5.9 accounting
p115 2008-12-18 5.12 accounting

Clone Sequence Records

SD01505.complete Sequence

2774 bp (2774 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058751

> SD01505.complete
ATCGCTAAGCCGCCCGTCAATTGTTTTCATGAATTGACGTGTCTTGTTGA
ATGCGAAAAAACCCAGAATAGACCGTAAACACACACTCGCATGGAGTTCC
TGAAGAGTGGCATCAAAACGGTGCTGGGCAGCACGGAGCCGGGTCAGCAG
CCGAGTGCCGCCGAGACGGTGGAGAAGCTGGTGGACCGTGTCTACTCCTC
AACGCTCCTGGAGGATCGACGGGATGCCTGCCGAGCGCTAAAAGCCCTGT
CCCGCAAGTACCGCATCGAGGTGGGCGCACAGGGCATGCCTCCGCTGGTC
CAGGTGCTCCAGAACGACGGACAGGATGCAGAGATCATCAGCTATGCGCT
GGACACACTGTGCAACGTGGTTACTAGCGAGGAGTTCGACGAGGAGGCTG
ATAATCCCACCGTTTCGGTGAATGTGGGCGAGCAGTTCACGGAGATGTTC
ATCAAGACACCGGAGCATGTAACCCTGGTAATGGGCTATCTGGACGAATA
CGATTTTCGAGTGCGTCGCGCTGCCATCCAACTGATTACGTCCCTCATTT
CGAACAAGACGCGGGAGCTGCAGGATTTGATTCTGGTCAGTCCGATGGGC
GTTTCCAAGCTGATGGATCTGCTGACGGACAGCCGCGAAGTGATTCGCAA
CGATGTCCTTCTGCTGCTTATCGAACTGACCAAGGGCAACTCAAACATCC
AAAAGATTGTGGCCTTTGAGAATGCCTTTGACCGCCTTTTTGAAATTGTC
CGTGAGGAGGGCTGTTCGGATGGCGGAATTGTTGTGGAGGATTGCCTAAT
TCTGCTATTGAATCTTCTCAAGAACAACTCCAGTAATCAGCAGTTCTTTA
AGGAGGGCAGCTATATCCAGCGATTGTCGCCAATGTTTGAGCTCTCACAG
GATGCGGAAGAGGTTGGCTGGTCGCCACAGAAGGTCTCAAACTTCCATTG
TCTGCTGCAGGTGGTGCGGGCACTGGTCACGCCCAGTAATCAACAGCAGG
TGGTGGCCGCCTGCCAGCGGGTCATGCAAAAGTCTCGACTGCTCCATGCT
CTTTGCGAGATTCTGATGAGCAGTGGTGTCCCTGCGGATATACTCACGGA
AACCATCAATGCAGTGGCCGAAGTGGTGCGCGGCGATCGGGACAACCAGG
ATGAATTGGGAAGAGTTATGGCTCCGAGCAGTCCACCCAGACCTGCCATC
GTGGTCCTTCTTATGTCCATGATCAATGAGAAACAACTGCTGGCACTGCG
TTGCGCCGTACTCTACTGTTTCGAGTGCTTTCTTTATCGCAATGCCGATG
GCCAGCGGGCGGTTGTACAGACCCTGCTGCCCTCCAGTGCGTCCGATGTG
AGTGCCCTTTCGACGGGACAACTCCTTTGCACCGGACTCTTCTCCACAGA
TGCGCTTGCCAACTGGTTCTCCGCTGTGGCCCTAATGCACTCACTCGTAG
AGAATGTCGCCCTAAAGGAGGAACTACTGCGCGTACTGCTGGCCACTCCT
GGTGGCCAAAAGCCTATCACGCTACTCGAGCAGTGCACTAATCTCATGCA
GCAGGAACGCTACCGTTTGCAAAGCAAGGTGGGTCTGCTAATGCTACTCA
GCCTGTGGCTGGCGCATTGTCCAGGTGCGGTGAAGGCTTTGCTGGAAACG
CAGGGCACCATGGCCTACCTGACCGCTCAACTTTGCTCCAACGAGCACGA
TGAACGAGAGTTCCTTGTCCAGGGCATGTGCGCCTTCCTAATGGGCCTGT
GCATCCAGTTCAATGACAACTCGCTGCCGGGGCAGAAGCGCGAGGACATC
AGTCAGCTGATCATCAAGCGAATTGGCCAGGAGAGCTTCTGTAGCAAACT
AGCAGAAGTGTCGCGACATGAGGCCTACAGTCGGGCATGCAAGCAGGCCC
AGATCCGTGCCAAATCCGCTGGGGAACTACTGCTTGACTTCGAGTATTGC
AAGCTGTACAAGGGACTGGAGGCGTTGATTGCCAAGCTGGTTAGCGGATT
TGATGTAGATGGCATTGAACTGACCGAACTCACGTTGAGCTCGGAAGCTT
CTGCATTGGTTTCCCAGTACAAGGGGATTATCCGCGGCATGGATGCCCAG
ATCCAAGCACTGCAGCAATCCTCCAAAGAACTGGAACAGGAGAATGCCGA
GCTGAAGGAGAAACTTGGTGAGGAGCAGTCGCTCAAGGCGCAGCTCTTGG
ACCAGAACACGCTGCTTAAGGCACAGCTGGGAGCCTCGACCGGTCAGGTG
CAGTCCGCCCAAGGTGCGGAAGCCACGCCGCCCAACGAGGAGGAGCTAAA
TGCCGCTCGCTACCAGGCCAACATGTACTTTGCCGAAAACATTCGTCTAA
CTAAGGAGCTGGAGACACTACGTCAGCAGTTATCAGCCGAAAAACAGAGT
GCAGATGCGGCGCAAGATTCCCTGGCGGCGATGCAAAAGGATCAAGAAGA
TTTGCTCGAACTGCTGGCCGATCAGGAGGCAAAGCTAACGCGATACGAAG
AAGCGGGCTCGACTAATACCCTTCCGACTTCCAATGTAGCTCCAAGCGTG
CCGGCAGCTGGCGGAGGAAGCCCCATCCCAAGTGGCACCGCCAGCAGGTA
GAAATCGTAACGCGGATGAGTTGCTAGCCACGTACATGTTACAACTGGAA
ATTGCTCGACTGCCCTAAAAACGTTAAAATATCTTATATACACACATTCT
ACTTGTTTTACATTTATTTAACTTACGTATAGAATATATGTCTAGATCAG
AAAAAAAAAAAAAAAAAAAAAAAA

SD01505.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:16:23
Subject Length Description Subject Range Query Range Score Percent Strand
p115-RA 2750 p115-RA 1..2750 1..2750 13735 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:00:46
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 7785936..7788685 1..2750 13750 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:44:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:00:44
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7894037..7896788 1..2752 13745 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:39:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 7902135..7904886 1..2752 13745 99.9 Plus
Blast to na_te.dros performed on 2019-03-16 04:00:44 has no hits.

SD01505.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:01:44 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 7785936..7788685 1..2750 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:56:27 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
p115-RA 1..2511 91..2601 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:58:14 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
p115-RA 1..2511 91..2601 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:12:13 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
p115-RA 1..2511 91..2601 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:27:28 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
p115-RA 1..2511 91..2601 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:22:47 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
p115-RA 1..2511 91..2601 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:44:57 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
p115-RA 1..2750 1..2750 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:58:14 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
p115-RA 1..2750 1..2750 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:12:13 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
p115-RA 7..2756 1..2750 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:27:29 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
p115-RA 1..2750 1..2750 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:22:47 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
p115-RA 7..2756 1..2750 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:01:44 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
X 7894037..7896786 1..2750 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:01:44 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
X 7894037..7896786 1..2750 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:01:44 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
X 7894037..7896786 1..2750 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:12:13 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7788070..7790819 1..2750 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:04:49 Download gff for SD01505.complete
Subject Subject Range Query Range Percent Splice Strand
X 7902135..7904884 1..2750 99   Plus

SD01505.hyp Sequence

Translation from 90 to 2600

> SD01505.hyp
MEFLKSGIKTVLGSTEPGQQPSAAETVEKLVDRVYSSTLLEDRRDACRAL
KALSRKYRIEVGAQGMPPLVQVLQNDGQDAEIISYALDTLCNVVTSEEFD
EEADNPTVSVNVGEQFTEMFIKTPEHVTLVMGYLDEYDFRVRRAAIQLIT
SLISNKTRELQDLILVSPMGVSKLMDLLTDSREVIRNDVLLLLIELTKGN
SNIQKIVAFENAFDRLFEIVREEGCSDGGIVVEDCLILLLNLLKNNSSNQ
QFFKEGSYIQRLSPMFELSQDAEEVGWSPQKVSNFHCLLQVVRALVTPSN
QQQVVAACQRVMQKSRLLHALCEILMSSGVPADILTETINAVAEVVRGDR
DNQDELGRVMAPSSPPRPAIVVLLMSMINEKQLLALRCAVLYCFECFLYR
NADGQRAVVQTLLPSSASDVSALSTGQLLCTGLFSTDALANWFSAVALMH
SLVENVALKEELLRVLLATPGGQKPITLLEQCTNLMQQERYRLQSKVGLL
MLLSLWLAHCPGAVKALLETQGTMAYLTAQLCSNEHDEREFLVQGMCAFL
MGLCIQFNDNSLPGQKREDISQLIIKRIGQESFCSKLAEVSRHEAYSRAC
KQAQIRAKSAGELLLDFEYCKLYKGLEALIAKLVSGFDVDGIELTELTLS
SEASALVSQYKGIIRGMDAQIQALQQSSKELEQENAELKEKLGEEQSLKA
QLLDQNTLLKAQLGASTGQVQSAQGAEATPPNEEELNAARYQANMYFAEN
IRLTKELETLRQQLSAEKQSADAAQDSLAAMQKDQEDLLELLADQEAKLT
RYEEAGSTNTLPTSNVAPSVPAAGGGSPIPSGTASR*

SD01505.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
p115-PB 836 CG1422-PB 1..836 1..836 4168 100 Plus
p115-PA 836 CG1422-PA 1..836 1..836 4168 100 Plus

SD01505.pep Sequence

Translation from 90 to 2600

> SD01505.pep
MEFLKSGIKTVLGSTEPGQQPSAAETVEKLVDRVYSSTLLEDRRDACRAL
KALSRKYRIEVGAQGMPPLVQVLQNDGQDAEIISYALDTLCNVVTSEEFD
EEADNPTVSVNVGEQFTEMFIKTPEHVTLVMGYLDEYDFRVRRAAIQLIT
SLISNKTRELQDLILVSPMGVSKLMDLLTDSREVIRNDVLLLLIELTKGN
SNIQKIVAFENAFDRLFEIVREEGCSDGGIVVEDCLILLLNLLKNNSSNQ
QFFKEGSYIQRLSPMFELSQDAEEVGWSPQKVSNFHCLLQVVRALVTPSN
QQQVVAACQRVMQKSRLLHALCEILMSSGVPADILTETINAVAEVVRGDR
DNQDELGRVMAPSSPPRPAIVVLLMSMINEKQLLALRCAVLYCFECFLYR
NADGQRAVVQTLLPSSASDVSALSTGQLLCTGLFSTDALANWFSAVALMH
SLVENVALKEELLRVLLATPGGQKPITLLEQCTNLMQQERYRLQSKVGLL
MLLSLWLAHCPGAVKALLETQGTMAYLTAQLCSNEHDEREFLVQGMCAFL
MGLCIQFNDNSLPGQKREDISQLIIKRIGQESFCSKLAEVSRHEAYSRAC
KQAQIRAKSAGELLLDFEYCKLYKGLEALIAKLVSGFDVDGIELTELTLS
SEASALVSQYKGIIRGMDAQIQALQQSSKELEQENAELKEKLGEEQSLKA
QLLDQNTLLKAQLGASTGQVQSAQGAEATPPNEEELNAARYQANMYFAEN
IRLTKELETLRQQLSAEKQSADAAQDSLAAMQKDQEDLLELLADQEAKLT
RYEEAGSTNTLPTSNVAPSVPAAGGGSPIPSGTASR*

SD01505.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:34:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21187-PA 830 GF21187-PA 1..821 1..815 3925 94.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:34:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19666-PA 836 GG19666-PA 1..836 1..836 4303 97.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:34:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24351-PA 819 GH24351-PA 1..816 1..819 3654 87 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:22:45
Subject Length Description Subject Range Query Range Score Percent Strand
p115-PB 836 CG1422-PB 1..836 1..836 4168 100 Plus
p115-PA 836 CG1422-PA 1..836 1..836 4168 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:34:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11005-PA 834 GI11005-PA 1..832 1..815 3690 86.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:34:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18338-PA 833 GL18338-PA 1..833 1..836 3728 86.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:34:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12833-PA 833 GA12833-PA 1..833 1..836 3732 86.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:34:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11979-PA 797 GM11979-PA 7..791 8..792 4036 97.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:34:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16864-PA 796 GD16864-PA 1..796 1..836 3932 93.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:34:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15604-PA 839 GJ15604-PA 1..807 1..808 3541 86 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:34:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10110-PA 837 GK10110-PA 1..802 1..804 3733 91.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:34:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15742-PA 837 GE15742-PA 1..837 1..836 4274 97.1 Plus