BDGP Sequence Production Resources |
Search the DGRC for SD02002
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 20 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | SMSr-RB |
Protein status: | SD02002.pep: wuzgold |
Preliminary Size: | 2008 |
Sequenced Size: | 1888 |
Gene | Date | Evidence |
---|---|---|
CG32380 | 2002-12-11 | Blastp of sequenced clone |
SMSr | 2008-04-29 | Release 5.5 accounting |
SMSr | 2008-08-15 | Release 5.9 accounting |
SMSr | 2008-12-18 | 5.12 accounting |
1888 bp (1888 high quality bases) assembled on 2002-12-11
GenBank Submission: BT003174
> SD02002.complete ATTTATTTGTGTACTCATATGCCTCTCATTCTGGCTAACTGGTTTTGTTA TTTTTGTGTAACTTTGCGTGCATTAAATTTCAAATTCCCATTTGTTTATG ATACCCTTCAAACGGCTGGTTTTACTTAACGGGCTACTCGTTCGTTGTCA CCTGGATAACATCGTTAACAATGGTTATTGTGCACGAGCGGGTTCCGGAT ATGAAGCGCTATCCGCCGCTGCCGGACATCTTCCTGGACAACGTGCCGCA TATTCCGTGGGCCTTTAATATGTGCGAAATAACCGGCTCACTATTGTTCA CCATTTGGGTGGTCGTGCTAACCTTCCACAAGTATAGATTGGTCCTACTG AGGCGATTCTTTGCTCTGGCGGGCACGGTTTTCCTGCTGCGCTGCGTCAC CATGTTGATCACGTCGCTGAGCGTACCGGGAACGCATCTGCAGTGCAGCC AGAAGGACTTTGCCATCGATGATCCCAATGTGGACATGGTGGGCGCCTTG ATTATCCGCATGTCACGAGCCTATCGCATCTGGAGCGGCCTGGGCATGTC CATTCAGGGAGTGCGGACCTGCGGCGATTATATGTTTAGTGGTCACACGG TGGCCTTGACCCTGCTCAACTTCTTTATCACAGAATACACGCCGCGGAAT CTGTACTTCCTGCACACGCTGACCTGGCTGCTCAACATGTTTGGCATATT CTTCATCCTGGCTGCCCACGAGCACTACTCCATCGATGTGTTTGTGGCCT TCTATATCACCTCACGTCTGTTTCTGTACTATCATACTCTAGCAAATAAC AGGGCTCTCATGCAAAGCGACTCCAAGAGGACGCGTGTTTGGTTTCCCAT GTTTAGCTACTTCGAGAGCAGTGTCGATGGAATGGTGCCCAATGAATACG ATACACTTGGCTCCCTCATCGATGGGATTATTGAGCAGATCTTCAAGGCC AAGGATCAATTGGCCATATCCGTGAAGCGCTGCTGGCTGGATGCCCCGCT GTCCGGCAATTCATCGGCTCACATGTTTGGCGGAGAATCTGAACAATGTT TGCGCAATGGCACAGCATCGGCCGCTTTCTTTAGTCCTCACCAGTCGCTG ATCGGAGGATTGGGTGGTCAGAGGAGCCAGACGCATTTGAATAGCGCCCA ATCCGGGTCCTCCACACCCACACCAGCTACATCGGCGCCGACCAAGAGTT TGCCGACCCAAAAGAAGACCTTCAGGGATGCGAGTGTGGATCCCTTTTCG CGCACGACGTTCGCTGCGGTCCAGCAGGCAGAAAACGTCAAGGATTCGCC GATGAAGGAAAAGAAGCATCTCTGATTCTCACAGCCATTCGCTCTTCCAC ATTCGTATATCGATATCGATGTCGCTCTTCGAAAAGCAAACATGCAGAAA CTAACCATACCGACTGATATTTTTATTTCGAAATTTCCATCGATCCCCTT CCTTTCACAGCTCTCCCCTGTATTATTGACAGCATTCTACCATTTGTAGT GCCTTCCGGGTCAGATCCCCCCAGATCATCCACCCACCATTTAGAAAGTC GTTATGTCCCCCAAGAGCCTTTCCTTAGTTTACTTGTGGAATTTTATGAA TATCGAAGTTTTTTTTAGCCGGGAGATGCTCCACGTCGGCTTTGAATTGA TTATGATGATAAGATAGCCCTCCTCATTCCGTTCAATTGAGTTTTGAACT AAATGTATTTATTATTGAAGACTTTTTAATGCATTATTATGTAATTGTAA GCATGTGAATCAAGCGTATTTTTAGTTAACTAGTGTTAAGTTTGGAAAGT TTCTGTTGAACGCACAAACACATTAAATAAATCAAAATGAATATTCTCAG AGTCTGGAGAAGCCACTGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 7366155..7367221 | 1869..803 | 5335 | 100 | Minus |
chr3L | 24539361 | chr3L | 7367510..7368018 | 636..128 | 2515 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 7367284..7367451 | 804..637 | 840 | 100 | Minus |
chr3L | 24539361 | chr3L | 7368753..7368885 | 133..1 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 7374047..7375116 | 1872..803 | 5335 | 99.9 | Minus |
3L | 28110227 | 3L | 7375405..7375913 | 636..128 | 2530 | 99.8 | Minus |
3L | 28110227 | 3L | 7375179..7375346 | 804..637 | 840 | 100 | Minus |
3L | 28110227 | 3L | 7376648..7376780 | 133..1 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 7367147..7368216 | 1872..803 | 5335 | 99.9 | Minus |
3L | 28103327 | 3L | 7368505..7369013 | 636..128 | 2530 | 99.8 | Minus |
3L | 28103327 | 3L | 7368279..7368446 | 804..637 | 840 | 100 | Minus |
3L | 28103327 | 3L | 7369748..7369880 | 133..1 | 665 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 7367285..7367451 | 637..803 | 100 | <- | Minus |
chr3L | 7366155..7367220 | 804..1869 | 100 | <- | Minus |
chr3L | 7367510..7368013 | 133..636 | 99 | <- | Minus |
chr3L | 7368754..7368885 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SMSr-RA | 606..1803 | 125..1325 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SMSr-RA | 606..1803 | 125..1325 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SMSr-RA | 606..1803 | 125..1325 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SMSr-RA | 606..1803 | 125..1325 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SMSr-RA | 606..1803 | 125..1325 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SMSr-RB | 1..1869 | 1..1869 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SMSr-RB | 1..1869 | 1..1869 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SMSr-RB | 1..1869 | 1..1869 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SMSr-RB | 1..1869 | 1..1869 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SMSr-RA | 850..2591 | 125..1869 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7374050..7375115 | 804..1869 | 99 | <- | Minus |
3L | 7375180..7375346 | 637..803 | 100 | <- | Minus |
3L | 7375405..7375908 | 133..636 | 100 | <- | Minus |
3L | 7376649..7376780 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7374050..7375115 | 804..1869 | 99 | <- | Minus |
3L | 7375180..7375346 | 637..803 | 100 | <- | Minus |
3L | 7375405..7375908 | 133..636 | 100 | <- | Minus |
3L | 7376649..7376780 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7374050..7375115 | 804..1869 | 99 | <- | Minus |
3L | 7375180..7375346 | 637..803 | 100 | <- | Minus |
3L | 7375405..7375908 | 133..636 | 100 | <- | Minus |
3L | 7376649..7376780 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 7368280..7368446 | 637..803 | 100 | <- | Minus |
arm_3L | 7367150..7368215 | 804..1869 | 99 | <- | Minus |
arm_3L | 7368505..7369008 | 133..636 | 100 | <- | Minus |
arm_3L | 7369749..7369880 | 1..132 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 7367150..7368215 | 804..1869 | 99 | <- | Minus |
3L | 7368280..7368446 | 637..803 | 100 | <- | Minus |
3L | 7368505..7369008 | 133..636 | 100 | <- | Minus |
3L | 7369749..7369880 | 1..132 | 100 | Minus |
Translation from 170 to 1324
> SD02002.pep MVIVHERVPDMKRYPPLPDIFLDNVPHIPWAFNMCEITGSLLFTIWVVVL TFHKYRLVLLRRFFALAGTVFLLRCVTMLITSLSVPGTHLQCSQKDFAID DPNVDMVGALIIRMSRAYRIWSGLGMSIQGVRTCGDYMFSGHTVALTLLN FFITEYTPRNLYFLHTLTWLLNMFGIFFILAAHEHYSIDVFVAFYITSRL FLYYHTLANNRALMQSDSKRTRVWFPMFSYFESSVDGMVPNEYDTLGSLI DGIIEQIFKAKDQLAISVKRCWLDAPLSGNSSAHMFGGESEQCLRNGTAS AAFFSPHQSLIGGLGGQRSQTHLNSAQSGSSTPTPATSAPTKSLPTQKKT FRDASVDPFSRTTFAAVQQAENVKDSPMKEKKHL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23791-PA | 606 | GF23791-PA | 232..595 | 1..366 | 1545 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14968-PA | 590 | GG14968-PA | 209..590 | 1..384 | 1850 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14877-PA | 614 | GH14877-PA | 251..614 | 1..384 | 1392 | 70.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SMSr-PA | 600 | CG32380-PA | 217..600 | 1..384 | 2016 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12850-PA | 586 | GI12850-PA | 236..529 | 1..296 | 1362 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24298-PA | 590 | GL24298-PA | 227..590 | 1..384 | 1428 | 72.3 | Plus |
Dper\GL14970-PA | 563 | GL14970-PA | 202..549 | 1..321 | 1203 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16857-PA | 590 | GA16857-PA | 227..590 | 1..384 | 1435 | 72.5 | Plus |
Dpse\GA22344-PA | 556 | GA22344-PA | 202..542 | 1..321 | 1164 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13763-PA | 601 | GM13763-PA | 217..601 | 1..384 | 1994 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13061-PA | 560 | GD13061-PA | 217..560 | 1..384 | 1726 | 86.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12995-PA | 580 | GJ12995-PA | 241..513 | 1..273 | 1357 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16808-PA | 639 | GK16808-PA | 245..624 | 1..359 | 1432 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20416-PA | 590 | GE20416-PA | 209..590 | 1..384 | 1879 | 93.8 | Plus |
Translation from 170 to 1324
> SD02002.hyp MVIVHERVPDMKRYPPLPDIFLDNVPHIPWAFNMCEITGSLLFTIWVVVL TFHKYRLVLLRRFFALAGTVFLLRCVTMLITSLSVPGTHLQCSQKDFAID DPNVDMVGALIIRMSRAYRIWSGLGMSIQGVRTCGDYMFSGHTVALTLLN FFITEYTPRNLYFLHTLTWLLNMFGIFFILAAHEHYSIDVFVAFYITSRL FLYYHTLANNRALMQSDSKRTRVWFPMFSYFESSVDGMVPNEYDTLGSLI DGIIEQIFKAKDQLAISVKRCWLDAPLSGNSSAHMFGGESEQCLRNGTAS AAFFSPHQSLIGGLGGQRSQTHLNSAQSGSSTPTPATSAPTKSLPTQKKT FRDASVDPFSRTTFAAVQQAENVKDSPMKEKKHL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SMSr-PA | 600 | CG32380-PA | 217..600 | 1..384 | 2016 | 100 | Plus |