![]() | BDGP Sequence Production Resources |
Search the DGRC for SD02428
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 24 |
Well: | 28 |
Vector: | pOT2 |
Associated Gene/Transcript | NiPp1-RA |
Protein status: | SD02428.pep: gold |
Preliminary Size: | 1405 |
Sequenced Size: | 1326 |
Gene | Date | Evidence |
---|---|---|
CG8980 | 2001-01-01 | Release 2 assignment |
CG8980 | 2001-11-29 | Blastp of sequenced clone |
CG8980 | 2003-01-01 | Sim4 clustering to Release 3 |
NiPp1 | 2008-04-29 | Release 5.5 accounting |
NiPp1 | 2008-08-15 | Release 5.9 accounting |
NiPp1 | 2008-12-18 | 5.12 accounting |
1326 bp (1326 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069781
> SD02428.complete TATAAACTTACCTTTTACTTAAGTTAAAAGTATGGCTAACAGCTACGACA TACCCAGTTGGGCTGGAAAACCGCCCACTGGCTTACATCTGGATGTGCTA AAGGACGACAAACTAGTACAAAAACTGATGGTGGATGAAAAAAGATGCTA TCTATTTGGTCGCAACAGTCAAATGAACGACTTCTGCATAGACCATGCCT CTTGTTCGCGGGTCCACTCGGCTTTTGTCTACCACAAGCACCTCAACATA GCCTACCTCGTGGATCTGGGGTCCACTCATGGCACCTTTATTGGAACACT CAGATTGGAAGCGCACAAGCCCACACAGCTGCAGATTAATAGCACCTTCC ACTTTGGGGCTTCTACCCGGAACTACATACTCAGGGAACGACCCTCTGGC CACCACAGCAACATCATGGAAGACCTGCCGCTCAGTGAAACCAGCGATGG CGCTCTCCTGGGCCTGCCCGAAAGCCAAACGGAGCTTGATAATCTTACAG AATACAACACGGCCCACAATCGGCGCATCTCAATGCTGGGCATCGATGAT GATACCAATATGCGAAAGCAAAACGCCTTGAAACAGGGACGGCGCACTCG AAATGTCACATTTAACGATGAGGAGATTGTCATCAATCCTGAGGATGTGG ATCCTAATGTGGGACGCTTCAGGAACTTGGTACAAACCACTGTGGTGCCC GCCAAGAGGGCACGCTGCGACGTCAACCATATGGGCATCCATTCGGGCAA CAGCAGTTTGTCCAGTGCCAATGCCGCACATGTACACCAAATGTTCCAGC AGAGCCTAGTTGACATGAAGCAGCAGCATAGGGAAATGCCTCCGCCCAAT GCGGTGCTCCACTCGCCTACTAATTCCCTATATCAAGGTCTACCGGCCGA AATGCATGGCAAGGGTGACCTAGAGCCCATCTCCCCGCTGAGCATTGGTT CCAAGTTGGGCCTATTGCTCCCGAATCCTGCGCCTGAAGTGCTGCCAGTC TATGACGAAGCTGTGGAGACCTCGACATTGGCTCAAAAGTTGGCCGTCGC TAATGCAAACGTTCGTCGCTTTGGTGAGGATCCGCATGACTCGAGTGGCG AAGGCGATTCGCTGTGCCCACAGAAAAAGAAATACGCCAAGGAAGCATGG CCAGGTCGCAAGCCCATGTTGGGGCAGCTGTAATTGCGTATTAACAAAAT AATTAAGATTCCACCTACGATTTTCTCAAGCATATGATTGACAACACACT CTGGAGTAATATTTGTTTATTAGACTTTTAACGTAAAACAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12891080..12891650 | 1061..491 | 2855 | 100 | Minus |
chr2R | 21145070 | chr2R | 12890792..12891020 | 1289..1061 | 1145 | 100 | Minus |
chr2R | 21145070 | chr2R | 12891712..12891926 | 490..276 | 1075 | 100 | Minus |
chr2R | 21145070 | chr2R | 12891982..12892197 | 275..60 | 1065 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 12892258..12892318 | 61..1 | 305 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17003851..17004421 | 1061..491 | 2795 | 99.3 | Minus |
2R | 25286936 | 2R | 17003559..17003791 | 1293..1061 | 1165 | 100 | Minus |
2R | 25286936 | 2R | 17004753..17004968 | 275..60 | 1065 | 99.5 | Minus |
2R | 25286936 | 2R | 17004483..17004697 | 490..276 | 1045 | 99.1 | Minus |
2R | 25286936 | 2R | 17005029..17005077 | 61..13 | 245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17005050..17005620 | 1061..491 | 2795 | 99.2 | Minus |
2R | 25260384 | 2R | 17004758..17004990 | 1293..1061 | 1165 | 100 | Minus |
2R | 25260384 | 2R | 17005952..17006167 | 275..60 | 1065 | 99.5 | Minus |
2R | 25260384 | 2R | 17005682..17005896 | 490..276 | 1045 | 99 | Minus |
2R | 25260384 | 2R | 17006228..17006276 | 61..13 | 245 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12890792..12891019 | 1062..1289 | 100 | <- | Minus |
chr2R | 12891080..12891650 | 491..1061 | 100 | <- | Minus |
chr2R | 12891712..12891926 | 276..490 | 100 | <- | Minus |
chr2R | 12891982..12892196 | 61..275 | 99 | <- | Minus |
chr2R | 12892259..12892318 | 1..60 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NiPp1-RA | 1..1152 | 32..1183 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NiPp1-RA | 1..1152 | 32..1183 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NiPp1-RA | 1..1152 | 32..1183 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NiPp1-RA | 1..1152 | 32..1183 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NiPp1-RA | 1..1152 | 32..1183 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NiPp1-RA | 1..1299 | 1..1289 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NiPp1-RA | 1..1299 | 1..1289 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NiPp1-RA | 51..1349 | 1..1289 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NiPp1-RA | 1..1299 | 1..1289 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
NiPp1-RA | 51..1349 | 1..1289 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17004753..17004967 | 61..275 | 99 | <- | Minus |
2R | 17003563..17003790 | 1062..1289 | 100 | <- | Minus |
2R | 17003851..17004421 | 491..1061 | 99 | <- | Minus |
2R | 17004483..17004697 | 276..490 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17004753..17004967 | 61..275 | 99 | <- | Minus |
2R | 17003563..17003790 | 1062..1289 | 100 | <- | Minus |
2R | 17003851..17004421 | 491..1061 | 99 | <- | Minus |
2R | 17004483..17004697 | 276..490 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17004753..17004967 | 61..275 | 99 | <- | Minus |
2R | 17003563..17003790 | 1062..1289 | 100 | <- | Minus |
2R | 17003851..17004421 | 491..1061 | 99 | <- | Minus |
2R | 17004483..17004697 | 276..490 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12891068..12891295 | 1062..1289 | 100 | <- | Minus |
arm_2R | 12891356..12891926 | 491..1061 | 99 | <- | Minus |
arm_2R | 12891988..12892202 | 276..490 | 99 | <- | Minus |
arm_2R | 12892258..12892472 | 61..275 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17004762..17004989 | 1062..1289 | 100 | <- | Minus |
2R | 17005050..17005620 | 491..1061 | 99 | <- | Minus |
2R | 17005682..17005896 | 276..490 | 99 | <- | Minus |
2R | 17005952..17006166 | 61..275 | 99 | <- | Minus |
Translation from 31 to 1182
> SD02428.pep MANSYDIPSWAGKPPTGLHLDVLKDDKLVQKLMVDEKRCYLFGRNSQMND FCIDHASCSRVHSAFVYHKHLNIAYLVDLGSTHGTFIGTLRLEAHKPTQL QINSTFHFGASTRNYILRERPSGHHSNIMEDLPLSETSDGALLGLPESQT ELDNLTEYNTAHNRRISMLGIDDDTNMRKQNALKQGRRTRNVTFNDEEIV INPEDVDPNVGRFRNLVQTTVVPAKRARCDVNHMGIHSGNSSLSSANAAH VHQMFQQSLVDMKQQHREMPPPNAVLHSPTNSLYQGLPAEMHGKGDLEPI SPLSIGSKLGLLLPNPAPEVLPVYDEAVETSTLAQKLAVANANVRRFGED PHDSSGEGDSLCPQKKKYAKEAWPGRKPMLGQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13433-PA | 382 | GF13433-PA | 1..382 | 1..383 | 1878 | 91.2 | Plus |
Dana\GF22145-PA | 425 | GF22145-PA | 272..403 | 5..131 | 173 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22227-PA | 387 | GG22227-PA | 1..387 | 1..383 | 1970 | 95.3 | Plus |
Dere\GG19762-PA | 415 | GG19762-PA | 262..385 | 5..117 | 182 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22943-PA | 406 | GH22943-PA | 1..406 | 1..383 | 1661 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NiPp1-PA | 383 | CG8980-PA | 1..383 | 1..383 | 2025 | 100 | Plus |
CG17168-PA | 421 | CG17168-PA | 268..399 | 5..131 | 168 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18434-PA | 398 | GI18434-PA | 1..398 | 1..383 | 1669 | 80.2 | Plus |
Dmoj\GI21565-PA | 493 | GI21565-PA | 338..469 | 5..131 | 170 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11611-PA | 385 | GL11611-PA | 1..385 | 1..383 | 1736 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21451-PA | 385 | GA21451-PA | 1..385 | 1..383 | 1736 | 87.6 | Plus |
Dpse\GA27539-PA | 433 | GA27539-PA | 280..411 | 5..131 | 169 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20014-PA | 383 | GM20014-PA | 1..383 | 1..383 | 2054 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25503-PA | 384 | GD25503-PA | 1..384 | 1..383 | 2039 | 98.7 | Plus |
Dsim\GD15469-PA | 422 | GD15469-PA | 269..392 | 5..117 | 174 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21519-PA | 411 | GJ21519-PA | 1..411 | 1..383 | 1680 | 78.4 | Plus |
Dvir\GJ16691-PA | 488 | GJ16691-PA | 331..462 | 5..131 | 172 | 30.2 | Plus |
Translation from 61 to 1182
> SD02428.hyp AGKPPTGLHLDVLKDDKLVQKLMVDEKRCYLFGRNSQMNDFCIDHASCSR VHSAFVYHKHLNIAYLVDLGSTHGTFIGTLRLEAHKPTQLQINSTFHFGA STRNYILRERPSGHHSNIMEDLPLSETSDGALLGLPESQTELDNLTEYNT AHNRRISMLGIDDDTNMRKQNALKQGRRTRNVTFNDEEIVINPEDVDPNV GRFRNLVQTTVVPAKRARCDVNHMGIHSGNSSLSSANAAHVHQMFQQSLV DMKQQHREMPPPNAVLHSPTNSLYQGLPAEMHGKGDLEPISPLSIGSKLG LLLPNPAPEVLPVYDEAVETSTLAQKLAVANANVRRFGEDPHDSSGEGDS LCPQKKKYAKEAWPGRKPMLGQL*