BDGP Sequence Production Resources |
Search the DGRC for SD02978
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 29 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | Sply-RA |
Protein status: | SD02978.pep: gold |
Preliminary Size: | 2129 |
Sequenced Size: | 2043 |
Gene | Date | Evidence |
---|---|---|
CG8946 | 2001-01-01 | Release 2 assignment |
CG8946 | 2001-07-04 | Blastp of sequenced clone |
CG8946 | 2003-01-01 | Sim4 clustering to Release 3 |
Sply | 2008-04-29 | Release 5.5 accounting |
Sply | 2008-08-15 | Release 5.9 accounting |
Sply | 2008-12-18 | 5.12 accounting |
2043 bp (2043 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052075
> SD02978.complete GTCACTCTAAGCCGCAATGAGTTTGTACGATTAAAAGTTTATGTCTATTC GCGTTTTTCGAAGCTTTCCCGATTCCCGTAGCTGTCCCACTGTACAGCTT GCCACACGATGCGTCCGTTCTCCGGCAGCGATTGCCTTAAGCCCGTCACC GAGGGCATCAACCGGGCGTTCGGCGCCAAGGAGCCTTGGCAGGTCGCCAC CATCACGGCCACCACGGTGCTGGGAGGCGTCTGGCTCTGGACTGTGATCT GCCAGGATGAAAATCTTTACATTCGTGGCAAGCGTCAGTTCTTTAAGTTT GCCAAGAAGATTCCAGCCGTGCGTCGTCAGGTGGAGACTGAATTGGCCAA GGCCAAAAACGACTTCGAGACGGAAATCAAAAAGAGCAACGCCCACCTTA CCTACTCGGAAACTCTGCCCGAGAAGGGACTCAGCAAGGAGGAGATCCTC CGACTGGTGGATGAGCACCTGAAGACTGGTCACTACAACTGGCGTGATGG TCGTGTATCTGGCGCGGTCTACGGCTACAAGCCTGATCTGGTGGAGCTCG TCACTGAAGTGTACGGCAAGGCCTCCTACACCAATCCCTTGCACGCAGAT CTTTTCCCGGGAGTTTGCAAAATGGAGGCGGAGGTAGTGCGCATGGCATG CAACCTGTTCCATGGAAACTCAGCCAGCTGTGGAACCATGACCACCGGCG GCACCGAATCCATTGTAATGGCCATGAAGGCGTACAGGGATTTCGCTAGA GAGTACAAGGGAATCACCAGGCCAAACATCGTGGTGCCTAAGACGGTCCA CGCGGCCTTCGACAAGGGTGGTCAGTACTTTAATATCCACGTGCGATCCG TGGATGTAGATCCGGAGACCTACGAAGTGGACATTAAGAAGTTCAAACGT GCCATTAATAGGAACACGATTCTGCTGGTTGGGTCTGCTCCAAACTTCCC CTATGGAACCATAGATGATATCGAAGCTATCGCCGCTTTGGGCGTTAAGT ACGACATTCCCGTGCACGTGGACGCCTGCCTGGGCAGCTTTGTGGTGGCC TTGGTCCGCAACGCCGGCTATAAGCTGCGTCCCTTCGACTTTGAGGTCAA GGGAGTGACCAGTATCTCCGCTGATACCCACAAGTATGGTTTCGCGCCCA AGGGATCATCGGTGATCCTTTACTCGGACAAGAAGTACAAGGACCATCAG TTCACTGTGACTACTGACTGGCCTGGCGGCGTGTATGGTTCTCCCACAGT CAACGGTTCCCGTGCCGGAGGTATTATCGCCGCCTGCTGGGCTACCATGA TGAGCTTTGGCTATGATGGTTATCTGGAAGCCACTAAGCGCATTGTGGAT ACGGCGCGCTATATCGAGAGGGGCGTTCGCGACATCGATGGCATCTTTAT CTTTGGCAAGCCAGCTACTTCAGTGATTGCCCTGGGTTCCAATGTGTTTG ACATTTTCCGGCTATCGGATTCGCTGTGCAAACTGGGCTGGAACCTAAAT GCGCTGCAGTTTCCATCTGGTATCCACCTGTGCGTGACGGACATGCACAC ACAGCCCGGAGTCGCGGATAAATTCATTGCCGATGTGCGCAGCTGTACGG CGGAGATCATGAAGGATCCCGGCCAGCCCGTCGTTGGAAAGATGGCTCTC TACGGCATGGCACAGAGCATACCCGACCGTTCGGTGATCGGAGAAGTGAC TCGCCTATTCCTGCACTCCATGTACTACACTCCCAGCCAGAAATAGACAC CTGGAGCAATCCCCGTTCTCTTCGCCCACCCCACGGAGCTAATGCATTTC CTGTGCTGTATTTAAACCACCAAAACACCCCGTCGTTAAACCTTCCTCAA GCAATTTATATTAGGATGCAATTAGTGCTGTAATCGAGGGTACAAAACGT CGTTCTACGCGAAAATCTATCTACCTATGTTCATCCCATTTGTCAACATT CGTCGCTCTAAGAGCCATGTTATTAAAGTGTTTTTCTGTGTAACTTGCTA GTGAAATAATAATATAATATTAATCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sply-RA | 2175 | Sply-RA | 52..2078 | 1..2027 | 10015 | 99.6 | Plus |
Sply.a | 2075 | Sply.a | 126..2058 | 95..2027 | 9545 | 99.5 | Plus |
Sply-RB | 2221 | Sply-RB | 207..2139 | 95..2027 | 9545 | 99.5 | Plus |
Sply.a | 2075 | Sply.a | 16..112 | 1..97 | 485 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12976931..12977592 | 924..263 | 3310 | 100 | Minus |
chr2R | 21145070 | chr2R | 12975658..12976163 | 2025..1520 | 2530 | 100 | Minus |
chr2R | 21145070 | chr2R | 12976427..12976876 | 1373..924 | 2235 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 12978564..12978731 | 262..95 | 810 | 98.8 | Minus |
chr2R | 21145070 | chr2R | 12976222..12976369 | 1520..1373 | 725 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 12979015..12979111 | 97..1 | 485 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17089714..17090375 | 924..263 | 3280 | 99.7 | Minus |
2R | 25286936 | 2R | 17088439..17088946 | 2027..1520 | 2540 | 100 | Minus |
2R | 25286936 | 2R | 17089210..17089659 | 1373..924 | 2205 | 99.3 | Minus |
2R | 25286936 | 2R | 17091359..17091526 | 262..95 | 810 | 98.8 | Minus |
2R | 25286936 | 2R | 17089005..17089152 | 1520..1373 | 725 | 99.3 | Minus |
2R | 25286936 | 2R | 17091810..17091906 | 97..1 | 485 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17090913..17091574 | 924..263 | 3280 | 99.6 | Minus |
2R | 25260384 | 2R | 17089638..17090145 | 2027..1520 | 2540 | 100 | Minus |
2R | 25260384 | 2R | 17090409..17090858 | 1373..924 | 2205 | 99.3 | Minus |
2R | 25260384 | 2R | 17092558..17092725 | 262..95 | 810 | 98.8 | Minus |
2R | 25260384 | 2R | 17090204..17090351 | 1520..1373 | 725 | 99.3 | Minus |
2R | 25260384 | 2R | 17093009..17093105 | 97..1 | 485 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12975683..12976162 | 1521..2000 | 100 | <- | Minus |
chr2R | 12976222..12976368 | 1374..1520 | 99 | <- | Minus |
chr2R | 12976427..12976875 | 925..1373 | 99 | <- | Minus |
chr2R | 12976931..12977592 | 263..924 | 100 | <- | Minus |
chr2R | 12978564..12978728 | 98..262 | 98 | <- | Minus |
chr2R | 12979015..12979111 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sply-RA | 1..1638 | 109..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sply-RA | 1..1638 | 109..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sply-RB | 1..1638 | 109..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sply-RA | 1..1638 | 109..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sply-RB | 1..1638 | 109..1746 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sply-RA | 52..2076 | 1..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sply-RA | 52..2076 | 1..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sply-RA | 53..2077 | 1..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sply-RA | 52..2076 | 1..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sply-RA | 53..2077 | 1..2025 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17088441..17088945 | 1521..2025 | 100 | <- | Minus |
2R | 17089005..17089151 | 1374..1520 | 99 | <- | Minus |
2R | 17089210..17089658 | 925..1373 | 99 | <- | Minus |
2R | 17089714..17090375 | 263..924 | 99 | <- | Minus |
2R | 17091359..17091523 | 98..262 | 98 | <- | Minus |
2R | 17091810..17091906 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17088441..17088945 | 1521..2025 | 100 | <- | Minus |
2R | 17089005..17089151 | 1374..1520 | 99 | <- | Minus |
2R | 17089210..17089658 | 925..1373 | 99 | <- | Minus |
2R | 17089714..17090375 | 263..924 | 99 | <- | Minus |
2R | 17091359..17091523 | 98..262 | 98 | <- | Minus |
2R | 17091810..17091906 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17088441..17088945 | 1521..2025 | 100 | <- | Minus |
2R | 17089005..17089151 | 1374..1520 | 99 | <- | Minus |
2R | 17089210..17089658 | 925..1373 | 99 | <- | Minus |
2R | 17089714..17090375 | 263..924 | 99 | <- | Minus |
2R | 17091359..17091523 | 98..262 | 98 | <- | Minus |
2R | 17091810..17091906 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12979315..12979411 | 1..97 | 100 | Minus | |
arm_2R | 12975946..12976450 | 1521..2025 | 100 | <- | Minus |
arm_2R | 12976510..12976656 | 1374..1520 | 99 | <- | Minus |
arm_2R | 12976715..12977163 | 925..1373 | 99 | <- | Minus |
arm_2R | 12977219..12977880 | 263..924 | 99 | <- | Minus |
arm_2R | 12978864..12979028 | 98..262 | 98 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17089640..17090144 | 1521..2025 | 100 | <- | Minus |
2R | 17090204..17090350 | 1374..1520 | 99 | <- | Minus |
2R | 17090409..17090857 | 925..1373 | 99 | <- | Minus |
2R | 17090913..17091574 | 263..924 | 99 | <- | Minus |
2R | 17092558..17092722 | 98..262 | 98 | <- | Minus |
2R | 17093009..17093105 | 1..97 | 100 | Minus |
Translation from 108 to 1745
> SD02978.pep MRPFSGSDCLKPVTEGINRAFGAKEPWQVATITATTVLGGVWLWTVICQD ENLYIRGKRQFFKFAKKIPAVRRQVETELAKAKNDFETEIKKSNAHLTYS ETLPEKGLSKEEILRLVDEHLKTGHYNWRDGRVSGAVYGYKPDLVELVTE VYGKASYTNPLHADLFPGVCKMEAEVVRMACNLFHGNSASCGTMTTGGTE SIVMAMKAYRDFAREYKGITRPNIVVPKTVHAAFDKGGQYFNIHVRSVDV DPETYEVDIKKFKRAINRNTILLVGSAPNFPYGTIDDIEAIAALGVKYDI PVHVDACLGSFVVALVRNAGYKLRPFDFEVKGVTSISADTHKYGFAPKGS SVILYSDKKYKDHQFTVTTDWPGGVYGSPTVNGSRAGGIIAACWATMMSF GYDGYLEATKRIVDTARYIERGVRDIDGIFIFGKPATSVIALGSNVFDIF RLSDSLCKLGWNLNALQFPSGIHLCVTDMHTQPGVADKFIADVRSCTAEI MKDPGQPVVGKMALYGMAQSIPDRSVIGEVTRLFLHSMYYTPSQK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13423-PA | 545 | GF13423-PA | 1..545 | 1..545 | 2807 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22218-PA | 545 | GG22218-PA | 1..545 | 1..545 | 2866 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20882-PA | 544 | GH20882-PA | 1..544 | 1..544 | 2626 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sply-PA | 545 | CG8946-PA | 1..545 | 1..545 | 2876 | 100 | Plus |
Sply-PB | 545 | CG8946-PB | 1..545 | 1..545 | 2876 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21004-PA | 544 | GI21004-PA | 1..544 | 1..544 | 2604 | 86.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10551-PA | 527 | GL10551-PA | 1..527 | 1..545 | 2683 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21426-PA | 545 | GA21426-PA | 1..545 | 1..545 | 2777 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20006-PA | 545 | GM20006-PA | 1..545 | 1..545 | 2925 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25496-PA | 545 | GD25496-PA | 1..545 | 1..545 | 2925 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20717-PA | 544 | GJ20717-PA | 1..544 | 1..544 | 2643 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17932-PA | 545 | GK17932-PA | 1..545 | 1..545 | 2630 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14215-PA | 545 | GE14215-PA | 1..545 | 1..545 | 2879 | 97.4 | Plus |
Translation from 108 to 1745
> SD02978.hyp MRPFSGSDCLKPVTEGINRAFGAKEPWQVATITATTVLGGVWLWTVICQD ENLYIRGKRQFFKFAKKIPAVRRQVETELAKAKNDFETEIKKSNAHLTYS ETLPEKGLSKEEILRLVDEHLKTGHYNWRDGRVSGAVYGYKPDLVELVTE VYGKASYTNPLHADLFPGVCKMEAEVVRMACNLFHGNSASCGTMTTGGTE SIVMAMKAYRDFAREYKGITRPNIVVPKTVHAAFDKGGQYFNIHVRSVDV DPETYEVDIKKFKRAINRNTILLVGSAPNFPYGTIDDIEAIAALGVKYDI PVHVDACLGSFVVALVRNAGYKLRPFDFEVKGVTSISADTHKYGFAPKGS SVILYSDKKYKDHQFTVTTDWPGGVYGSPTVNGSRAGGIIAACWATMMSF GYDGYLEATKRIVDTARYIERGVRDIDGIFIFGKPATSVIALGSNVFDIF RLSDSLCKLGWNLNALQFPSGIHLCVTDMHTQPGVADKFIADVRSCTAEI MKDPGQPVVGKMALYGMAQSIPDRSVIGEVTRLFLHSMYYTPSQK*