BDGP Sequence Production Resources |
Search the DGRC for SD02991
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 29 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | SCAR-RA |
Protein status: | SD02991.pep: gold |
Preliminary Size: | 2501 |
Sequenced Size: | 2308 |
Gene | Date | Evidence |
---|---|---|
CG4636 | 2001-10-10 | Blastp of sequenced clone |
CG4636 | 2003-01-01 | Sim4 clustering to Release 3 |
SCAR | 2008-04-29 | Release 5.5 accounting |
SCAR | 2008-08-15 | Release 5.9 accounting |
SCAR | 2008-12-18 | 5.12 accounting |
2308 bp (2308 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061579
> SD02991.complete CTTCGGTCACACTGCAAAGGTGTGGAAATCTTAGTTTCCACAAAACGAGC AAATATTTGCAGTTTTCAAGCCCCAAATTGGCTAATTAGAGTTCGCATCG GATCGAATTTGCCACCGAACCCCCGAAACGGAAGTGGCTGCTTAATGTTT GTTGTGGTGCCAGCCGCCAAACGAAAAGTGTGACGGGCGTCGATGAGGAC GCACTAATTTACGGGTTTGCCAATTTGGAGATAATTGTCAATCGCGCCCG ACCATGCCGCTGCCCAAACGATCCATAGAACCCGTGCATGTGGCCCGCTC CGTGTATCAGCAGGATGAGCTGCAATCCGTGGAGCTGGAGACGGTCACCA ACACCACGCTGACGAACATCATTCGCCAGCTGTCCTCGCTGTCCAAGCAC GCAGAGGATGTGTTCGGTGAACTGGCCCGCGACGTGGGCAACATCGGGGA TCGAGCTAACTCCCTGCAGGCGCGCATCGATCGCCTAGCTATCAAAGTTA CCCAGCTGGACAGCACAGTTGAGGAGGTGCCCTTGACGGACATTACCCGA AAGAAGGCCTTCAAGTCGGCCAAGGTTTTTGATCAACAGATCTTCTCGCG CGCCACCATGCCGGCACCAATGATGGACACATATGCCCAGTGCGACAAAC CGCCGCCCCTCGACAAGCTTAATGTCTATCGAGACGATGGCAAGGATGGT CTTAAGTTCTACACGGATCCGAACTACTTCTTTGAGTTGTGGCGACAGGA GATGCTGAAGGATACCGAACGTGTGATGCACGACAAGGGCAAGAAGCTGA ACAGACCGCGGCAGGATGGCGGTGCCGGCGGAGCTGCTGGACGTGGCAAT AAGAAACAGAAGACCAAAATAAGGGTGCCGCACAATACGCGCGAACAGCA GCGACAACGTGCACTGGTGCACGGCGAAACATTGATGCCCAACAACGTCA TCTACCGCACACCGAATTCCATGGTCAACGAAGAAGCCGGATACGGAAAT ATGGGAGTGTACGATACACGTCCGCCACGTCCTAACTCGATCGAATTGAA CCGAAGCTATCAGTCGGAGCAGATCGATGGTAGCACCTACGAGCAGCTTC CACCGCAGATGGGTAATCAGTATGCTGCCACCTTCGGCAACGGCATGGGT GGCCCCCAGCAGATGCACATGCAGCATCAGCAGATGTATGACGCCGGAAT GTATCAGTCGCATGCGCTGTACGGCCAAACTGGACAGGGAGTAATGTCGC CGGAGCCCATCTACGGACCGGGAACACCGTCGCGTAACAAACCGCGTCCG TCGCAGCCGCCACCGGCTCCGCCATCGAATGGCAGCGGTGGTGGTACGCC CACAGCCTCCAATGCCAACACTCCGACAAGGGGCAGAAGTATGTCGACCA GTCGGGATGCCTTGCCACCGCCTCCACCAGTTCCAGACGTCATTTCACCA ATGTCTGGCATGAACGGAGTCAACAGCGGGCATATGGCGGCCAAACTGCT TGGCCGGGCGAACAGTTCGTCGGGAGCTGGATCTCCCAACAGCGTCCAGA ATGCCAATGATATGGTCATGACGCAACTGAGCAATACTTTCCACAGCATC GGTATGACGGGCAATCAACTGAACTCCCTTAGCGACTTGCCGCCACCGCC GCCGGTTCCAGATCAGCACTCGCCTAAGATGTCGCCACCTAATGCCGCGC CACCACCGCCGCCGCCACCGCCTCCAGTCGAGGAAGGCATGGGCAGTGGC AACCAACACACGCTGCGCCCGCATCAAATTCTTCCCAAATCACTGGCCAA TGGCGAAATGCAGCAGCCCGGCCAACAAAATGGTGTGCCTCACATTGTCG CACCCAAGAAGATGCTGCCTCCATTCCATGACCCACGCAACGACTTGATG AAAGCCATTCGAGATGGTATTACTCTACGTAAAGTTGAAAAGTCAGAGCA AAAGGAAATTGAACGAAACGCGGCGCCATTGGATGTGGCTTCAATCTTGG CCAGACGTGTGGCTATCGAATTATCCGAGTCCGAGGATTCGGATAGCGAA GACGACAGCGAGGGCTGGATGGAACCGAACGAAACATCGGCTTGATCCCT GATTAACTCGTTAAAGCCTGACATAATTCTAAAAAACAAAAAGAAGAAGT AATTCCAAAGAGAATTAATCCATACGATGGTCGAAACCAAGCGTGGTATG AAATTGGATTACACAAAAGCACCAAAGCTTTTCTACCACCCTTTATACAA TATACACCTAATCCTAAATAATATGTCTAAAATCAAAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SCAR-RA | 2829 | SCAR-RA | 5..2292 | 1..2288 | 11410 | 99.9 | Plus |
SCAR.d | 2871 | SCAR.d | 1084..2373 | 999..2288 | 6420 | 99.8 | Plus |
SCAR.e | 2891 | SCAR.e | 1105..2394 | 999..2288 | 6420 | 99.8 | Plus |
SCAR.d | 2871 | SCAR.d | 5..1005 | 1..1001 | 5005 | 100 | Plus |
SCAR.e | 2891 | SCAR.e | 5..1002 | 1..998 | 4990 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10976653..10977462 | 189..998 | 4050 | 100 | Plus |
chr2L | 23010047 | chr2L | 10979201..10979868 | 999..1666 | 3325 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 10980242..10980610 | 1916..2284 | 1845 | 100 | Plus |
chr2L | 23010047 | chr2L | 10979932..10980187 | 1664..1919 | 1265 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 10975535..10975723 | 1..189 | 945 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10977897..10978706 | 189..998 | 4050 | 100 | Plus |
2L | 23513712 | 2L | 10980445..10981112 | 999..1666 | 3325 | 99.9 | Plus |
2L | 23513712 | 2L | 10981486..10981858 | 1916..2288 | 1865 | 100 | Plus |
2L | 23513712 | 2L | 10981176..10981431 | 1664..1919 | 1265 | 99.6 | Plus |
2L | 23513712 | 2L | 10976780..10976968 | 1..189 | 945 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10977897..10978706 | 189..998 | 4050 | 100 | Plus |
2L | 23513712 | 2L | 10980445..10981112 | 999..1666 | 3325 | 99.8 | Plus |
2L | 23513712 | 2L | 10981486..10981858 | 1916..2288 | 1865 | 100 | Plus |
2L | 23513712 | 2L | 10981176..10981431 | 1664..1919 | 1265 | 99.6 | Plus |
2L | 23513712 | 2L | 10976780..10976968 | 1..189 | 945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10975535..10975723 | 1..189 | 100 | -> | Plus |
chr2L | 10976654..10977462 | 190..998 | 100 | -> | Plus |
chr2L | 10979201..10979868 | 999..1666 | 99 | -> | Plus |
chr2L | 10979935..10980184 | 1667..1916 | 99 | -> | Plus |
chr2L | 10980243..10980610 | 1917..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RA | 1..1842 | 254..2095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RA | 1..1842 | 254..2095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RE | 1..1899 | 254..2152 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RA | 1..1842 | 254..2095 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RE | 1..1899 | 254..2152 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RA | 7..2290 | 1..2284 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RA | 7..2290 | 1..2284 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RA | 9..2292 | 1..2284 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RA | 7..2290 | 1..2284 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SCAR-RA | 9..2292 | 1..2284 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10976780..10976968 | 1..189 | 100 | -> | Plus |
2L | 10977898..10978706 | 190..998 | 100 | -> | Plus |
2L | 10980445..10981112 | 999..1666 | 99 | -> | Plus |
2L | 10981179..10981428 | 1667..1916 | 99 | -> | Plus |
2L | 10981487..10981854 | 1917..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10976780..10976968 | 1..189 | 100 | -> | Plus |
2L | 10977898..10978706 | 190..998 | 100 | -> | Plus |
2L | 10980445..10981112 | 999..1666 | 99 | -> | Plus |
2L | 10981179..10981428 | 1667..1916 | 99 | -> | Plus |
2L | 10981487..10981854 | 1917..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10976780..10976968 | 1..189 | 100 | -> | Plus |
2L | 10977898..10978706 | 190..998 | 100 | -> | Plus |
2L | 10980445..10981112 | 999..1666 | 99 | -> | Plus |
2L | 10981179..10981428 | 1667..1916 | 99 | -> | Plus |
2L | 10981487..10981854 | 1917..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10976780..10976968 | 1..189 | 100 | -> | Plus |
arm_2L | 10977898..10978706 | 190..998 | 100 | -> | Plus |
arm_2L | 10980445..10981112 | 999..1666 | 99 | -> | Plus |
arm_2L | 10981179..10981428 | 1667..1916 | 99 | -> | Plus |
arm_2L | 10981487..10981854 | 1917..2284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10977898..10978706 | 190..998 | 100 | -> | Plus |
2L | 10980445..10981112 | 999..1666 | 99 | -> | Plus |
2L | 10981179..10981428 | 1667..1916 | 99 | -> | Plus |
2L | 10981487..10981854 | 1917..2284 | 100 | Plus | |
2L | 10976780..10976968 | 1..189 | 100 | -> | Plus |
Translation from 253 to 2094
> SD02991.hyp MPLPKRSIEPVHVARSVYQQDELQSVELETVTNTTLTNIIRQLSSLSKHA EDVFGELARDVGNIGDRANSLQARIDRLAIKVTQLDSTVEEVPLTDITRK KAFKSAKVFDQQIFSRATMPAPMMDTYAQCDKPPPLDKLNVYRDDGKDGL KFYTDPNYFFELWRQEMLKDTERVMHDKGKKLNRPRQDGGAGGAAGRGNK KQKTKIRVPHNTREQQRQRALVHGETLMPNNVIYRTPNSMVNEEAGYGNM GVYDTRPPRPNSIELNRSYQSEQIDGSTYEQLPPQMGNQYAATFGNGMGG PQQMHMQHQQMYDAGMYQSHALYGQTGQGVMSPEPIYGPGTPSRNKPRPS QPPPAPPSNGSGGGTPTASNANTPTRGRSMSTSRDALPPPPPVPDVISPM SGMNGVNSGHMAAKLLGRANSSSGAGSPNSVQNANDMVMTQLSNTFHSIG MTGNQLNSLSDLPPPPPVPDQHSPKMSPPNAAPPPPPPPPPVEEGMGSGN QHTLRPHQILPKSLANGEMQQPGQQNGVPHIVAPKKMLPPFHDPRNDLMK AIRDGITLRKVEKSEQKEIERNAAPLDVASILARRVAIELSESEDSDSED DSEGWMEPNETSA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SCAR-PE | 632 | CG4636-PE | 1..613 | 1..613 | 3245 | 100 | Plus |
SCAR-PA | 613 | CG4636-PA | 1..613 | 1..613 | 3245 | 100 | Plus |
SCAR-PC | 640 | CG4636-PC | 1..640 | 1..613 | 3207 | 95.8 | Plus |
SCAR-PB | 641 | CG4636-PB | 1..641 | 1..613 | 3201 | 95.5 | Plus |
SCAR-PF | 647 | CG4636-PF | 1..647 | 1..613 | 3195 | 94.6 | Plus |
Translation from 253 to 2094
> SD02991.pep MPLPKRSIEPVHVARSVYQQDELQSVELETVTNTTLTNIIRQLSSLSKHA EDVFGELARDVGNIGDRANSLQARIDRLAIKVTQLDSTVEEVPLTDITRK KAFKSAKVFDQQIFSRATMPAPMMDTYAQCDKPPPLDKLNVYRDDGKDGL KFYTDPNYFFELWRQEMLKDTERVMHDKGKKLNRPRQDGGAGGAAGRGNK KQKTKIRVPHNTREQQRQRALVHGETLMPNNVIYRTPNSMVNEEAGYGNM GVYDTRPPRPNSIELNRSYQSEQIDGSTYEQLPPQMGNQYAATFGNGMGG PQQMHMQHQQMYDAGMYQSHALYGQTGQGVMSPEPIYGPGTPSRNKPRPS QPPPAPPSNGSGGGTPTASNANTPTRGRSMSTSRDALPPPPPVPDVISPM SGMNGVNSGHMAAKLLGRANSSSGAGSPNSVQNANDMVMTQLSNTFHSIG MTGNQLNSLSDLPPPPPVPDQHSPKMSPPNAAPPPPPPPPPVEEGMGSGN QHTLRPHQILPKSLANGEMQQPGQQNGVPHIVAPKKMLPPFHDPRNDLMK AIRDGITLRKVEKSEQKEIERNAAPLDVASILARRVAIELSESEDSDSED DSEGWMEPNETSA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15838-PA | 648 | GF15838-PA | 1..648 | 1..613 | 2525 | 87.2 | Plus |
Dana\GF23228-PA | 2210 | GF23228-PA | 146..259 | 27..136 | 173 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23688-PA | 617 | GG23688-PA | 1..617 | 1..613 | 3173 | 97.7 | Plus |
Dere\GG23102-PA | 1787 | GG23102-PA | 138..251 | 27..136 | 173 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10763-PA | 692 | GH10763-PA | 1..244 | 1..247 | 1194 | 89.1 | Plus |
Dgri\GH10763-PA | 692 | GH10763-PA | 313..692 | 249..613 | 1024 | 72.5 | Plus |
Dgri\GH17981-PA | 1780 | GH17981-PA | 153..262 | 27..132 | 164 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SCAR-PE | 632 | CG4636-PE | 1..613 | 1..613 | 3245 | 100 | Plus |
SCAR-PA | 613 | CG4636-PA | 1..613 | 1..613 | 3245 | 100 | Plus |
SCAR-PC | 640 | CG4636-PC | 1..640 | 1..613 | 3207 | 95.8 | Plus |
SCAR-PB | 641 | CG4636-PB | 1..641 | 1..613 | 3201 | 95.5 | Plus |
SCAR-PF | 647 | CG4636-PF | 1..647 | 1..613 | 3195 | 94.6 | Plus |
SCAR-PD | 674 | CG4636-PD | 1..674 | 1..613 | 2875 | 84.4 | Plus |
gukh-PB | 534 | CG31043-PB | 138..251 | 27..136 | 170 | 33.3 | Plus |
gukh-PC | 1044 | CG31043-PC | 138..251 | 27..136 | 170 | 33.3 | Plus |
gukh-PE | 1764 | CG31043-PE | 138..251 | 27..136 | 170 | 33.3 | Plus |
gukh-PA | 1788 | CG31043-PA | 138..251 | 27..136 | 170 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20586-PA | 622 | GI20586-PA | 1..622 | 1..613 | 2288 | 82.1 | Plus |
Dmoj\GI10550-PA | 1831 | GI10550-PA | 149..258 | 27..132 | 173 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19132-PA | 615 | GL19132-PA | 1..615 | 1..613 | 2486 | 86.9 | Plus |
Dper\GL23446-PA | 1240 | GL23446-PA | 151..264 | 27..136 | 178 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18320-PA | 615 | GA18320-PA | 1..615 | 1..613 | 2486 | 86.9 | Plus |
Dpse\GA15962-PE | 2087 | GA15962-PE | 148..261 | 27..136 | 178 | 32.5 | Plus |
Dpse\GA15962-PB | 1895 | GA15962-PB | 148..261 | 27..136 | 178 | 32.5 | Plus |
Dpse\GA15962-PC | 1114 | GA15962-PC | 148..261 | 27..136 | 177 | 32.5 | Plus |
Dpse\GA15962-PD | 616 | GA15962-PD | 148..261 | 27..136 | 174 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18775-PA | 596 | GM18775-PA | 1..596 | 1..613 | 3048 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23746-PA | 332 | GD23746-PA | 1..332 | 286..613 | 1683 | 98.2 | Plus |
Dsim\GD23745-PA | 260 | GD23745-PA | 1..259 | 1..259 | 1391 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13927-PA | 620 | GJ13927-PA | 1..620 | 1..613 | 2257 | 82.4 | Plus |
Dvir\GJ22906-PA | 1832 | GJ22906-PA | 153..262 | 27..132 | 181 | 34.5 | Plus |