Clone SD02996 Report

Search the DGRC for SD02996

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:29
Well:96
Vector:pOT2
Associated Gene/TranscriptCG43658-RE
Protein status:SD02996.pep: gold
Preliminary Size:6016
Sequenced Size:7107

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8557 2001-01-01 Release 2 assignment
CG8557 2001-11-29 Blastp of sequenced clone
CG8557 2003-01-01 Sim4 clustering to Release 3
CG8557 2008-04-29 Release 5.5 accounting
CG8557 2008-08-15 Release 5.9 accounting
CG8557 2008-12-18 5.12 accounting

Clone Sequence Records

SD02996.complete Sequence

7107 bp (7107 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069788

> SD02996.complete
TTCAATTGCTACAGTTCATTGTTATACAGAGATCGAGTTATGGATTATAT
ATCCTAAATGATTCAACTGACCGGATAATTTGATATCAAATATCTAATGT
GACACACTGTTAAACATTACAATATCTCACCCTATTTATTGTTTCTTGGG
CCTTTTCAGTGAGTGTTTGCAATGGCGATAATTGTTGTTAAATGCTTGCC
ATGCGAAACAATGAAGGCGCACTAAAGAACTATAATTTGAGTGTTTTGCA
TCTATAATTTAAGTGTCTGTATCTGGACATTTGTGTCTTTAAATGTATCT
GTATCTACATATCCGAGTACCAATGAACATAAATTGAACTCCGGCTCATG
GGAGGACACCTTGGACGAGCCCCATCACCACCACGCGCATCACTCGCACC
ACCAGCAGCATCTGCACCAGCACCACTCGCACCTCAGCCAGCGACACCAG
CAGCAGCAGCAGCAGCAGCAGCAGCTGCAGCAGACCTCGTTCATTGGATC
ACCGCCGTCCAGTGCCAGCATCACCACCGCCCAGCTGCACAGTGCGTTTA
GCCGGAGGATTGCCGAGCAGCGGGAACGAGATCAGCGTGACCAGCGGGAT
CAGCGGGAAGCAGTGGGCTGCACCGCAGCCACAATTGCCGGCGGAAGCTT
CAGCGCCAACGGTGGCCAGGCTGCCGTTGGTGTCGGCGTTGGTAGCAGCA
GCAGCTGCGGCAGCAGTAGCGAACGGGACACCAAATCGCCCTGCCGCGAA
CGGGATAGGAATCTCGAGCGGGACAGAGATCGCGAGCGAGACAAGAACGA
CGATCTGGGCGAGGAGGAGGTTCTCACCGAGGAGGAGCAGACCAGCAGCA
GCGTGAGTTCGCTAAGTGCCGGCAATCAACGCAATTCGCAATTGCGTTCC
ACCTTCAACAAGGCCAAGCAGCATTTGTCGTTTGACAAATGGCGCACGGC
CGCCACCGGAAGCGCAACAGGTTCCGCATCCGGCCCAGGATCATCAGCCA
CTGATAGCAACAACGCCGCTAGCAACATGATTATGCGACGGGCCAGTGCC
TGCACAATGCCATCGAGTGGCGGAGGAGGAGGAGCAGGTGTTGGTAGTTC
CCAGAGAGAGGAGGCCACCACACCGGGTGAATCGCCCGGAGGACGCCTGT
CCCGCTGGTTTTCCATCAGGCGCGGCTCATCGCACCAGTATGACGTTGGA
GGACGCGATGGACGCCACTCGACCGCCTCCAGTTTCGATACGCCCGATTC
GGGTTCGGGAAATTCACCGAAAAACGGATCCAATGCGGTCGCTGGAACCG
GGGGAGCAGGATCCCAAGGAGTAGCGCTGGACGCAGCTTCACCACAGAAA
TTGGCCAATTTGGGAGCCAGCAAAATGATGCCCGGAGTGCCAGAGTCGGA
GGATGACGAGGCGACTGCCAATCGCTTCGATGTGGACCTTATGATGACGC
CTGGCAGTCGGGCCAATGGAACTGCTCGAACCGCCCACAACCGGCTGATT
GTACCCATGTTGCCGCCCGCCCCCGCAGGACTGTCCCAGCAACAGCTGAA
GAGGCGCCACATTGTGGCAGCCATTGTGCACAGTGAGAACTCGTATGTGG
CCACCCTGCAGCGACTAGTCAATGATTACAAGAAACCGCTGGAGGAGTGC
AGCCCGCCAGTCCTGAATCCGGTGAAGATAGCCACCCTGTTCCATTGCCT
GCCGGACATCTTGCACTCGCACAAGTTGTTCCGGATCTCGTTGGCGGAGT
GCGTCCGGAACTGGGATCGCGATGAGAAGATCGGCGATTGCTTTGTGAGC
GCGTTTGGAAAGCCGCAGCTACTAGAGATTTACTCCGGTTTCATCAACAA
CTTCTCGGCGGCCATGGAGCTGGCCAAGATGGAGGAAAAGCGCAAATCGG
CACTGGCCGATTTCTTTAAGGTCAAGCAGATCAGTGCCCACGATCGGTTG
TCGTTTTTCGGACTGATGGTGAAGCCGGTGCAGCGTTTCCCCCAGTTCAT
CCTCTTCCTGCAGGATCTGCTGAAATACACGCCACAGGGCCACCACGACA
GGATGTCGCTGCAGTTGGCCCTGTCGCAGCTGGAACTCCTGGCGGAGCTC
CTCAACGAGAGCAAACGGGAGGCGGAGCAGTACCAGGCCTTTAAGGAGAT
GCTTGGCCACATCTCGGGCACCTTCAATGCCCGATCCCTGAGTTTGAGCA
GCGTCAGTGTCAGCGACTCTGCCGGCGGCCATCGGCCGAGGTACTTACTC
CGCGAGGACAACGTCACCCACATGGAGTTCAACCAGGCCGGTTTCATTGT
CAAGTGCAAGCAGCGGCGGCTGCTCCTGCTCAACGATAAGGTCATTTGCG
TGTCGGTGGCGCCCAAGCAGTCGCACGATTTCGGGGCCACCGAGAAACTC
ACCTTCAAGTGGATGTTTCCAGTCAACGATGTCGAGATTGTGGACAACAG
CACGTCGGCCACGCTCTCGAGGATTCTTACGGCGGGTCTCAACCGCGGCG
GCAGCTTGAAGTCCAATGGCAGCAGTGGTGCCAACGGCAGCCCGTATGCG
AATAGTACTCTTCCTGGACATGGAGGTGGCGTGTCGGGCTTCTCCGGCTT
TGGGGATCCGCACAGCTCGCCAGCCGCACAGCTGACAAACGGGGCGGACA
ATCTGTGCAGCGAGATGAGCACGCTGATGTATGACTACGAGGTGATTTCT
CGCATTCAGGATCTAGTTTCCAGTTTGAAGGGCAGCTACAAGGAGCTAAA
CGCGAATACCACGCGCAACGTGCTCAATCTTATCCAAGGCTCCATCCAGC
GCAAGGACGAGGAGATGGCCTGGGTAGACTCTTGCTGCCTGCAGCTCATT
GGACGACACAAGTCCGGCAAGGAGGAAACCTTCACATTCCAGACGCAGAC
GCCTGCGGTGAAGAAGGAGTGGATCACAGAGTTGCGTCTGGCTCAGCTGG
CCCTCGATCCGAACAATTCGCCAGCCTGGGAACGTGGTGGCTCCCATCCT
CAGCCCGCCCATCATCACCCACATCATCATCCGCTGCAGCATCCGCATGC
GGGAGCTGGCGATCCCCGCCAGACGCAGGAGCAACTGCAGCTGCAGGAAG
CCGTACAGCAGAAGCAGTCGCGTAAAATGCCGCTCTTTGTCAAGGCGATG
CCTGTCTACAAATCACAGCATCAAACCGAGGTGCGCTGTGGATGTTACTA
CAGCATCGCCAATGACACCAAACAGAGCGGAAACGCGCGACGCCGGCACA
AGCAGCTCAATTACCTGTGGATGTGCAGCAGCGATGGCACCTCCTCGCAC
ATCACCGTTTTAGCCCAACACCCTCAGCAGGCGGGCAATCTTCGCGAGGC
GGGTGCCTTTGACCTTTTTGAGACCCAGGTCTCTGCGTTGGAGTTCGTCA
AGGGACTGGATCAGCTGAAGTCGCGAGATGAGCCGGCCAGTCTGCTGGGC
GATCTGGTTTGGCTGGGCACGGATAGCCGCAAGATTCTGATCTACTCGGC
ACGGAATCCCGAGCAGGAGGAGCAGCTGGGAAGCTATTCGGTACCGGGAG
CAGTTCAGCGAATCCTTTATCACTTCGATGCGGTTTATGTGGCTCTTTCG
GGAGCCACGGTGCTCATTTTCCGCAGAGGAAACGATGGCGTTTGGCAGTT
GCGAGACCCGCAGACCATCCGTCTCGGTGACACCGATCTGGTGGTGCCCA
GCCTTTTGCCGATCAACATGTGCATCTACGCTTCGTGCGGCAACCGAGTG
TACGTTATGAACGCCCTGAACGGCGAGATCCAGCGCAGCTTTGAAGTGCA
GCACGGGGCCACTCAGCAGGTGAATCTAATGGCCCACTCCGGCATCGGTT
TGTGGATCTCGCTGAAGAACTCGACAATGTTGTGCCTGTACCACACGGAG
ACGTTTAAGCATCTGCAGGACATCAACATAGCATCCAGTGTACTGCGACA
CGATGGCAAAAAGGAGCAGCCGCTGAACAATAGCTCGGTGTATGTGACCG
CCCTGATGGCCTGCAAGGGTTTGCTGTGGGTGGGCACCAATGTGGGTATT
GCGGTGACCATTCCACTGCCCCGTCTGGAGGGAGTGCCCATCATCAGCGG
TGGAATCAACATGTCCTGTCACGCGCACTTTGGACCCATCACCTTTTTGT
TGCCACTGATTCCAAAGGTTTATCCCGCCTACAAGCCACCGACCGTGGGT
GCAGCTCCATTGGTACCCAGCATGGGAGATGACCTCCAGCTGCCGGCCAT
TGATGCGGATCCAAAGATCCAGGAGTTGGACGACGGGGCCGTGGTGTTGC
GTCGTGACCTTGCTAAGGAAGAGATGTCGTCCAGTAATCCCGGAGCAGAT
TCAACTGCCTCATCACCGCGCAGCTCCAAACTGGACAAGCAGAATTCGCT
GGACCAGAGTTTTACTGCAAAAATACGCGCTTCGCTGGCAAATTCGCCGG
CTTTCCACCGCAAGCGTTTCCGCGATGATCCGAATAGAATGTCCAAAACT
TTACCCCGTGGCCTGGGAGCCGCGGCAGCCGGCAGCGGAGCAGGAGGAGC
AAGTGCAGCAGGATCGGGAACAGCCAGTGGTAACACTTCGCAGCATGGCG
AGCACGGTATCTGCGACGTTTACGGCCTGTATGGCAAGCTAATATTCGTG
AAGGAGGACTACGATGCGGAGGAGGGCAATCAGGGCAACCTAATGGACAT
GATGTATGAGGGTATGAGACGCTCTGATCCAGAATTGGCAGCTATACCCG
GCAAGGTGTGCACCCTGGATAGACGTTTGCGCATGAAGGCATCGCGACCA
AGGTCGTTGGACCTCTCAAACTGGTCGGTGGACTCCAAGTCCTCCAGTCT
GTATACATCGTCGGGCAGCGAAGAGAGCATGGGCATCCGGCACTTTGGCG
GACGTTCTGTGTCCCGCAACAGCAGCAGTGCCAGCCACAAGACATCCGGC
ACAGGCAGTGATCTGGGCAACATATCAGAGAACGGCCTCATGACCACGGC
GGACATCCATCACCATCAGCAGCAGCAACAGCAGCTGAATAGCTCCGCCA
AGCCAGATGAGATGAGCCGACTCGGCGCAGGGAACTCGGGACTGGACAAG
CCAGCCGCCGCGGTGGCCACTTTAAAGCGAAAACAGAAGCAGAACTCCAA
GCAGCAGCAGCAACAGAACGCCGACGGACCAAGGACAGTGATCACCCTGA
TGGGCGGACGCGGCTACTGGCGCCAGATGTGGTACAACGGGGCGGGTGGT
TCGCCCAGCCATAAGAACAGCAGCTCCGGCGGCGGCGGAGGCAGTGGCTC
CGGATTCAGTGGCCAAACAATGCAGTCGGGTAATCCCAGCTGCTCACCGC
TGACGGCCAACTCCAATGACGCCCACATCGTTGTCTGGGAGAAGAAGTTA
TAATCGCAGGAGCTGGTGTGCTGCTGCACCCTTCAGCAGCATCCCCACCA
GCACCATCCACCGCTAACCGAGCTGTGGCGCCGCGTGGGCGAGCAGCATC
AGCAGCACCAGCAGCTGCAGCAGGCGCAGCGTCGTGGCCGTGGACGGGTC
CGGTTCCGGGGATCCTTTATTCAGCGGGATCGCAGTGCCGGCAGCGATGG
AGGAAGCGGTTACGGATCAGGCGGATTGTCAGGTGCTGGCGGATCGGGGG
GCATGTTGGGTGCCAGTCTGAAGCGACTGACCAAGCTAAAGCGCGGCGGC
AGCCTCAAGGAGTTCTAGATTCGCGTGTACATTGTTTTTCGAAATTTAGT
TTGTAGCACATAGACTTACGTTTAGGCTCAAAAACCGGCGGCCACCTAAA
TCACTTGATTTCTTTTGCGCTTGTCGTAAGCCGGAATATCGAATATATTT
ATTAGCGCCCTGTTTACGATTCCAATCCGAATCGGAGAACCATTTAGCCC
CAAAGCTCCAGTGTTTGCTAAACAAAATATTTTCAAATGTACAGATCTTT
GGATAAACTGTACTGATTTCATTTTTCCCATTTCAAAACTATCTTCTTGT
TGTAGAACCGTATATACATATGGTTTATAAATTTCATCTATTCGCTAAAC
TTTAATGTTGTTGTAATATTTTGCAAAACCATAATTTTCATGGAGGTTTC
CGTGTAGGAAAACGCTTTCGTTTTGATCATTTCCAATAATTTTGGTATCG
AAGTTGAACATCGTTAATTTCTTAGTTAATCACATATAACTGCACTTTTT
CAATATGAATGCTTAAAATCTGCTAGCTTTCGGGAAAAGCTGAGTTTGAA
TCAGATTTGGAACCTGTAGTGGGCACAGGGGTGTATATATAGCGAATGTT
TCTGAAGAAACCTAGTGTTTAGTCAAGTGTTTTCTCAAACTTGAGCAGCC
AACTATCTCTTTTTGTTCTCGATTCTTGCGTTAGAATGTGAAACTTAGCC
CTAGGGAAATGTTTTTTTTTTTTCGTATGTAGTTCATAACTGAATATCCA
AATATACAAGTTTTTTTTTTTCGTTAGTTCTGTAAGCATACTATGTTACA
TAGGATATAAACTAGATGATAAGCGATGAAGCACACACACAAGAGAGCGG
CCAAGCCAACAAGCTAGGGGGAAATGATGTTGTCTGTACAATAAGAGATA
AAGCAAAACAATAATGCATTGTTTAGTTATCCGGGAAACTGTCGAAGGAG
CAGGACTTGTGGATGGAGTGCGACATGGTAATGCAAATGGTTATTTGGCC
CATTCTACGACCATGTGCAGCACTTCTTATCGGTTTTTCTCAAGCTTTTC
GAAGCGAAAACTCTGAGGCAGCTGGCAGCACTTTCCTTATGTATGTATTA
TAACGAAATTAATATTTAACGTACTTCCCCTTTATGGATAAACCCCATTT
GTAGTACTCTAATGCCTGTATTTGTGAACATTTACAACAAGCAAACAAGA
AATAAAAAACAAGTGTTTTTTTGTCTGTCAAGTAAACTTAAATATACAAA
GGTAATGAAGCGAACAAGGAATATCTTATATACACACAAAAACATACTTA
TATACGATTTACATTTATGAAATATACATGTGCGTGTGTGCAACATGAAT
ATTTAGCTAAAAATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA

SD02996.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:54:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG8557-RA 7067 CG8557-RA 1..7067 1..7067 35125 99.8 Plus
CG8557.b 7658 CG8557.b 517..7279 323..7085 33590 99.7 Plus
CG8557.c 7354 CG8557.c 213..6975 323..7085 33590 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 17345921..17349809 7067..3179 19445 100 Minus
chrX 22417052 chrX 17353241..17354313 1395..323 5365 100 Minus
chrX 22417052 chrX 17350624..17351487 2487..1624 4320 100 Minus
chrX 22417052 chrX 17349866..17350563 3182..2485 3490 100 Minus
chrX 22417052 chrX 17378361..17378682 322..1 1610 100 Minus
chrX 22417052 chrX 17352957..17353187 1624..1394 1155 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:46:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17456539..17460445 7085..3179 19460 99.9 Minus
X 23542271 X 17463876..17464948 1395..323 5335 99.8 Minus
X 23542271 X 17461260..17462123 2487..1624 4260 99.5 Minus
X 23542271 X 17460502..17461199 3182..2485 3430 99.4 Minus
X 23542271 X 17488994..17489315 322..1 1610 100 Minus
X 23542271 X 17463592..17463822 1624..1394 1155 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:20:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 17464637..17468543 7085..3179 19460 99.8 Minus
X 23527363 X 17471974..17473046 1395..323 5335 99.8 Minus
X 23527363 X 17469358..17470221 2487..1624 4260 99.5 Minus
X 23527363 X 17468600..17469297 3182..2485 3430 99.4 Minus
X 23527363 X 17497092..17497413 322..1 1610 100 Minus
X 23527363 X 17471690..17471920 1624..1394 1155 100 Minus
Blast to na_te.dros performed 2019-03-15 19:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6803..7127 4914..5232 178 55.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6773..6934 4917..5073 157 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6864 4917..5050 156 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2313..2502 5008..5196 151 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6752..7002 4917..5168 147 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2406..2523 4917..5035 142 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2355..2526 5008..5175 137 56.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2319..2549 4917..5153 134 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6861 5015..5165 129 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6932 5008..5179 127 55.6 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 831..1012 4855..5036 126 58.2 Plus

SD02996.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:34:39 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 17345931..17349807 3181..7057 99 <- Minus
chrX 17349868..17350562 2486..3180 100 <- Minus
chrX 17350626..17351487 1624..2485 100 <- Minus
chrX 17352958..17353185 1396..1623 100 <- Minus
chrX 17353241..17354313 323..1395 95 <- Minus
chrX 17378361..17378682 1..322 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:21:50 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
CG8557-RC 76..5160 317..5403 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:25:52 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
CG8557-RC 76..5160 317..5403 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:12:49 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
CG43658-RC 1712..6792 323..5403 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:53:12 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
CG8557-RB 1..4377 1027..5403 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:53 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
CG43658-RC 1712..6792 323..5403 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:21:50 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
CG8557-RA 1..7067 1..7067 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:25:52 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
CG8557-RA 1..7067 1..7067 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:12:49 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
CG43658-RA 1..7067 1..7067 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:53:12 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
CG8557-RA 1..7067 1..7067 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:53 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
CG43658-RA 1..7067 1..7067 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:34:39 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
X 17456557..17460443 3181..7067 99 <- Minus
X 17460504..17461198 2486..3180 99 <- Minus
X 17461262..17462123 1624..2485 99 <- Minus
X 17463593..17463820 1396..1623 100 <- Minus
X 17463876..17464948 323..1395 99 <- Minus
X 17488994..17489315 1..322 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:34:39 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
X 17456557..17460443 3181..7067 99 <- Minus
X 17460504..17461198 2486..3180 99 <- Minus
X 17461262..17462123 1624..2485 99 <- Minus
X 17463593..17463820 1396..1623 100 <- Minus
X 17463876..17464948 323..1395 99 <- Minus
X 17488994..17489315 1..322 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:34:39 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
X 17456557..17460443 3181..7067 99 <- Minus
X 17460504..17461198 2486..3180 99 <- Minus
X 17461262..17462123 1624..2485 99 <- Minus
X 17463593..17463820 1396..1623 100 <- Minus
X 17463876..17464948 323..1395 99 <- Minus
X 17488994..17489315 1..322 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:12:49 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17350590..17354476 3181..7067 99 <- Minus
arm_X 17354537..17355231 2486..3180 99 <- Minus
arm_X 17355295..17356156 1624..2485 99 <- Minus
arm_X 17357626..17357853 1396..1623 100 <- Minus
arm_X 17357909..17358981 323..1395 99 <- Minus
arm_X 17383027..17383348 1..322 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:29:15 Download gff for SD02996.complete
Subject Subject Range Query Range Percent Splice Strand
X 17464655..17468541 3181..7067 99 <- Minus
X 17468602..17469296 2486..3180 99 <- Minus
X 17469360..17470221 1624..2485 99 <- Minus
X 17471691..17471918 1396..1623 100 <- Minus
X 17471974..17473046 323..1395 99 <- Minus
X 17497092..17497413 1..322 100   Minus

SD02996.pep Sequence

Translation from 1026 to 5402

> SD02996.pep
MIMRRASACTMPSSGGGGGAGVGSSQREEATTPGESPGGRLSRWFSIRRG
SSHQYDVGGRDGRHSTASSFDTPDSGSGNSPKNGSNAVAGTGGAGSQGVA
LDAASPQKLANLGASKMMPGVPESEDDEATANRFDVDLMMTPGSRANGTA
RTAHNRLIVPMLPPAPAGLSQQQLKRRHIVAAIVHSENSYVATLQRLVND
YKKPLEECSPPVLNPVKIATLFHCLPDILHSHKLFRISLAECVRNWDRDE
KIGDCFVSAFGKPQLLEIYSGFINNFSAAMELAKMEEKRKSALADFFKVK
QISAHDRLSFFGLMVKPVQRFPQFILFLQDLLKYTPQGHHDRMSLQLALS
QLELLAELLNESKREAEQYQAFKEMLGHISGTFNARSLSLSSVSVSDSAG
GHRPRYLLREDNVTHMEFNQAGFIVKCKQRRLLLLNDKVICVSVAPKQSH
DFGATEKLTFKWMFPVNDVEIVDNSTSATLSRILTAGLNRGGSLKSNGSS
GANGSPYANSTLPGHGGGVSGFSGFGDPHSSPAAQLTNGADNLCSEMSTL
MYDYEVISRIQDLVSSLKGSYKELNANTTRNVLNLIQGSIQRKDEEMAWV
DSCCLQLIGRHKSGKEETFTFQTQTPAVKKEWITELRLAQLALDPNNSPA
WERGGSHPQPAHHHPHHHPLQHPHAGAGDPRQTQEQLQLQEAVQQKQSRK
MPLFVKAMPVYKSQHQTEVRCGCYYSIANDTKQSGNARRRHKQLNYLWMC
SSDGTSSHITVLAQHPQQAGNLREAGAFDLFETQVSALEFVKGLDQLKSR
DEPASLLGDLVWLGTDSRKILIYSARNPEQEEQLGSYSVPGAVQRILYHF
DAVYVALSGATVLIFRRGNDGVWQLRDPQTIRLGDTDLVVPSLLPINMCI
YASCGNRVYVMNALNGEIQRSFEVQHGATQQVNLMAHSGIGLWISLKNST
MLCLYHTETFKHLQDINIASSVLRHDGKKEQPLNNSSVYVTALMACKGLL
WVGTNVGIAVTIPLPRLEGVPIISGGINMSCHAHFGPITFLLPLIPKVYP
AYKPPTVGAAPLVPSMGDDLQLPAIDADPKIQELDDGAVVLRRDLAKEEM
SSSNPGADSTASSPRSSKLDKQNSLDQSFTAKIRASLANSPAFHRKRFRD
DPNRMSKTLPRGLGAAAAGSGAGGASAAGSGTASGNTSQHGEHGICDVYG
LYGKLIFVKEDYDAEEGNQGNLMDMMYEGMRRSDPELAAIPGKVCTLDRR
LRMKASRPRSLDLSNWSVDSKSSSLYTSSGSEESMGIRHFGGRSVSRNSS
SASHKTSGTGSDLGNISENGLMTTADIHHHQQQQQQLNSSAKPDEMSRLG
AGNSGLDKPAAAVATLKRKQKQNSKQQQQQNADGPRTVITLMGGRGYWRQ
MWYNGAGGSPSHKNSSSGGGGGSGSGFSGQTMQSGNPSCSPLTANSNDAH
IVVWEKKL*

SD02996.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:23:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22612-PA 1475 GF22612-PA 1..1475 1..1458 6177 85.5 Plus
Dana\GF10633-PA 1219 GF10633-PA 896..1148 798..1042 299 29.7 Plus
Dana\GF18172-PA 1126 GF18172-PA 169..379 176..381 280 29.6 Plus
Dana\GF24148-PA 1323 GF24148-PA 867..1064 186..381 211 29.5 Plus
Dana\GF18172-PA 1126 GF18172-PA 810..1042 811..1041 208 24.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:23:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18180-PA 1702 GG18180-PA 238..1702 1..1458 7681 97.3 Plus
Dere\GG14930-PA 1220 GG14930-PA 886..1149 787..1042 304 29.6 Plus
Dere\GG16755-PA 1101 GG16755-PA 153..363 176..381 284 29.6 Plus
Dere\GG14932-PA 1384 GG14932-PA 928..1125 186..381 217 29.5 Plus
Dere\GG16755-PA 1101 GG16755-PA 784..1016 811..1041 209 24.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:23:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12011-PA 1866 GH12011-PA 260..1755 1..1452 5742 79.2 Plus
Dgri\GH15838-PA 1073 GH15838-PA 136..346 176..381 291 30.5 Plus
Dgri\GH16510-PA 1233 GH16510-PA 913..1164 798..1042 290 29.4 Plus
Dgri\GH16512-PA 1351 GH16512-PA 895..1092 186..381 211 28.5 Plus
Dgri\GH15838-PA 1073 GH15838-PA 750..982 811..1041 202 24.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG43658-PF 1563 CG43658-PF 1..1458 1..1458 7600 100 Plus
CG43658-PH 1458 CG43658-PH 1..1458 1..1458 7600 100 Plus
CG43658-PG 1563 CG43658-PG 1..1458 1..1458 7600 100 Plus
CG43658-PE 1458 CG43658-PE 1..1458 1..1458 7600 100 Plus
CG43658-PD 1736 CG43658-PD 279..1736 1..1458 7600 100 Plus
CG43658-PB 1458 CG43658-PB 1..1458 1..1458 7600 100 Plus
CG43658-PA 1458 CG43658-PA 1..1458 1..1458 7600 100 Plus
CG43658-PC 2263 CG43658-PC 806..2263 1..1458 7600 100 Plus
syd-PD 1188 CG8110-PD 863..1083 796..1018 299 32.6 Plus
syd-PB 1194 CG8110-PB 869..1089 796..1018 299 32.6 Plus
syd-PE 1202 CG8110-PE 889..1109 796..1018 299 32.6 Plus
syd-PG 1205 CG8110-PG 889..1109 796..1018 299 32.6 Plus
syd-PH 1208 CG8110-PH 895..1115 796..1018 299 32.6 Plus
syd-PJ 1211 CG8110-PJ 895..1115 796..1018 299 32.6 Plus
syd-PF 1214 CG8110-PF 889..1109 796..1018 299 32.6 Plus
syd-PK 1214 CG8110-PK 889..1109 796..1018 299 32.6 Plus
syd-PC 1215 CG8110-PC 902..1122 796..1018 299 32.6 Plus
syd-PI 1220 CG8110-PI 895..1115 796..1018 299 32.6 Plus
syd-PA 1227 CG8110-PA 902..1122 796..1018 299 32.6 Plus
CG43102-PE 1101 CG43102-PE 93..365 82..381 280 26.1 Plus
CG43102-PD 1542 CG43102-PD 489..806 29..381 275 26 Plus
CG43102-PG 1875 CG43102-PG 822..1139 29..381 275 26 Plus
CG43102-PB 2448 CG43102-PB 1395..1712 29..381 275 26 Plus
CG43102-PA 2448 CG43102-PA 1395..1712 29..381 275 26 Plus
CG43102-PF 2468 CG43102-PF 1395..1712 29..381 275 26 Plus
CG43102-PC 2519 CG43102-PC 1466..1783 29..381 275 26 Plus
pbl-PF 567 CG8114-PF 111..308 186..381 217 29.5 Plus
pbl-PC 782 CG8114-PC 326..523 186..381 217 29.5 Plus
pbl-PA 853 CG8114-PA 397..594 186..381 217 29.5 Plus
pbl-PE 900 CG8114-PE 444..641 186..381 217 29.5 Plus
pbl-PD 1240 CG8114-PD 784..981 186..381 217 29.5 Plus
pbl-PB 1311 CG8114-PB 855..1052 186..381 217 29.5 Plus
CG43102-PE 1101 CG43102-PE 784..1016 811..1041 208 24.9 Plus
CG43102-PD 1542 CG43102-PD 1225..1457 811..1041 208 24.9 Plus
CG43102-PG 1875 CG43102-PG 1558..1790 811..1041 208 24.9 Plus
CG43102-PB 2448 CG43102-PB 2131..2363 811..1041 208 24.9 Plus
CG43102-PA 2448 CG43102-PA 2131..2363 811..1041 208 24.9 Plus
CG43102-PF 2468 CG43102-PF 2131..2363 811..1041 208 24.9 Plus
CG43102-PC 2519 CG43102-PC 2202..2434 811..1041 208 24.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14643-PA 1156 GI14643-PA 1..1156 280..1458 4444 79.1 Plus
Dmoj\GI14642-PA 469 GI14642-PA 239..444 1..215 831 75.7 Plus
Dmoj\GI12186-PA 1238 GI12186-PA 918..1169 798..1042 296 29.4 Plus
Dmoj\GI23633-PA 1059 GI23633-PA 128..338 176..381 290 30 Plus
Dmoj\GI12189-PA 1294 GI12189-PA 838..1035 186..381 212 28.5 Plus
Dmoj\GI23633-PA 1059 GI23633-PA 738..970 811..1041 201 24.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16418-PA 809 GL16418-PA 444..809 1118..1458 907 69.3 Plus
Dper\GL16418-PA 809 GL16418-PA 1..172 280..453 777 93.7 Plus
Dper\GL17820-PA 1096 GL17820-PA 778..1025 801..1042 289 28.7 Plus
Dper\GL12238-PA 1112 GL12238-PA 149..395 176..411 286 28.9 Plus
Dper\GL12238-PA 1112 GL12238-PA 797..1029 811..1041 214 24.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22567-PA 1454 GA22567-PA 1..1454 1..1458 5711 80.6 Plus
Dpse\GA30221-PD 1543 GA30221-PD 568..826 169..411 288 29.1 Plus
Dpse\GA30221-PC 2405 GA30221-PC 1430..1688 169..411 288 29.1 Plus
Dpse\GA30221-PB 2461 GA30221-PB 1486..1744 169..411 288 29.1 Plus
Dpse\GA20831-PA 1235 GA20831-PA 916..1164 801..1042 287 28.6 Plus
Dpse\GA30221-PC 2405 GA30221-PC 2090..2322 811..1041 217 24.9 Plus
Dpse\GA30221-PB 2461 GA30221-PB 2146..2378 811..1041 217 24.9 Plus
Dpse\GA30221-PD 1543 GA30221-PD 1228..1460 811..1041 216 24.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13312-PA 1738 GM13312-PA 281..1738 1..1458 7816 99.3 Plus
Dsec\GM15343-PA 1101 GM15343-PA 155..365 176..381 283 29.6 Plus
Dsec\GM24980-PA 1107 GM24980-PA 900..1096 796..994 249 33 Plus
Dsec\GM24983-PA 1307 GM24983-PA 851..1048 186..381 217 29.5 Plus
Dsec\GM15343-PA 1101 GM15343-PA 784..1016 811..1041 208 24.9 Plus
Dsec\GM11115-PA 1408 GM11115-PA 675..940 175..479 175 25.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17354-PA 1731 GD17354-PA 274..1731 1..1458 7827 99.5 Plus
Dsim\GD13029-PA 1225 GD13029-PA 900..1154 796..1042 302 30.2 Plus
Dsim\GD20215-PA 984 GD20215-PA 155..365 176..381 283 29.6 Plus
Dsim\GD13031-PA 1374 GD13031-PA 918..1115 186..381 217 29.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:23:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19291-PA 1786 GJ19291-PA 1..1456 1..1426 5701 80.6 Plus
Dvir\GJ11422-PA 1234 GJ11422-PA 914..1165 798..1042 299 29.8 Plus
Dvir\GJ24709-PA 1057 GJ24709-PA 124..334 176..381 296 30.5 Plus
Dvir\GJ19852-PA 108 GJ19852-PA 15..108 1361..1458 246 71.4 Plus
Dvir\GJ11424-PA 1369 GJ11424-PA 881..1110 154..381 206 25.9 Plus
Dvir\GJ24709-PA 1057 GJ24709-PA 736..968 811..1041 202 24.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19920-PA 1815 GK19920-PA 248..1715 1..1452 5692 79.9 Plus
Dwil\GK20315-PA 1273 GK20315-PA 947..1161 798..1014 293 32.6 Plus
Dwil\GK22503-PA 1099 GK22503-PA 134..344 176..381 286 30 Plus
Dwil\GK22503-PA 1099 GK22503-PA 770..1002 811..1041 205 24.1 Plus
Dwil\GK18055-PA 1176 GK18055-PA 724..922 186..381 203 28.4 Plus
Dwil\GK18056-PA 910 GK18056-PA 458..656 186..381 200 28.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:23:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15589-PA 1465 GE15589-PA 1..1465 1..1458 7722 98 Plus
Dyak\GE20382-PA 1223 GE20382-PA 898..1152 796..1042 302 30.2 Plus
Dyak\GE25250-PA 1103 GE25250-PA 155..365 176..381 281 29.6 Plus
Dyak\GE20384-PA 1378 GE20384-PA 922..1119 186..381 217 29.5 Plus
Dyak\GE25250-PA 1103 GE25250-PA 786..1018 811..1041 209 24.9 Plus

SD02996.hyp Sequence

Translation from 1026 to 5402

> SD02996.hyp
MIMRRASACTMPSSGGGGGAGVGSSQREEATTPGESPGGRLSRWFSIRRG
SSHQYDVGGRDGRHSTASSFDTPDSGSGNSPKNGSNAVAGTGGAGSQGVA
LDAASPQKLANLGASKMMPGVPESEDDEATANRFDVDLMMTPGSRANGTA
RTAHNRLIVPMLPPAPAGLSQQQLKRRHIVAAIVHSENSYVATLQRLVND
YKKPLEECSPPVLNPVKIATLFHCLPDILHSHKLFRISLAECVRNWDRDE
KIGDCFVSAFGKPQLLEIYSGFINNFSAAMELAKMEEKRKSALADFFKVK
QISAHDRLSFFGLMVKPVQRFPQFILFLQDLLKYTPQGHHDRMSLQLALS
QLELLAELLNESKREAEQYQAFKEMLGHISGTFNARSLSLSSVSVSDSAG
GHRPRYLLREDNVTHMEFNQAGFIVKCKQRRLLLLNDKVICVSVAPKQSH
DFGATEKLTFKWMFPVNDVEIVDNSTSATLSRILTAGLNRGGSLKSNGSS
GANGSPYANSTLPGHGGGVSGFSGFGDPHSSPAAQLTNGADNLCSEMSTL
MYDYEVISRIQDLVSSLKGSYKELNANTTRNVLNLIQGSIQRKDEEMAWV
DSCCLQLIGRHKSGKEETFTFQTQTPAVKKEWITELRLAQLALDPNNSPA
WERGGSHPQPAHHHPHHHPLQHPHAGAGDPRQTQEQLQLQEAVQQKQSRK
MPLFVKAMPVYKSQHQTEVRCGCYYSIANDTKQSGNARRRHKQLNYLWMC
SSDGTSSHITVLAQHPQQAGNLREAGAFDLFETQVSALEFVKGLDQLKSR
DEPASLLGDLVWLGTDSRKILIYSARNPEQEEQLGSYSVPGAVQRILYHF
DAVYVALSGATVLIFRRGNDGVWQLRDPQTIRLGDTDLVVPSLLPINMCI
YASCGNRVYVMNALNGEIQRSFEVQHGATQQVNLMAHSGIGLWISLKNST
MLCLYHTETFKHLQDINIASSVLRHDGKKEQPLNNSSVYVTALMACKGLL
WVGTNVGIAVTIPLPRLEGVPIISGGINMSCHAHFGPITFLLPLIPKVYP
AYKPPTVGAAPLVPSMGDDLQLPAIDADPKIQELDDGAVVLRRDLAKEEM
SSSNPGADSTASSPRSSKLDKQNSLDQSFTAKIRASLANSPAFHRKRFRD
DPNRMSKTLPRGLGAAAAGSGAGGASAAGSGTASGNTSQHGEHGICDVYG
LYGKLIFVKEDYDAEEGNQGNLMDMMYEGMRRSDPELAAIPGKVCTLDRR
LRMKASRPRSLDLSNWSVDSKSSSLYTSSGSEESMGIRHFGGRSVSRNSS
SASHKTSGTGSDLGNISENGLMTTADIHHHQQQQQQLNSSAKPDEMSRLG
AGNSGLDKPAAAVATLKRKQKQNSKQQQQQNADGPRTVITLMGGRGYWRQ
MWYNGAGGSPSHKNSSSGGGGGSGSGFSGQTMQSGNPSCSPLTANSNDAH
IVVWEKKL*

SD02996.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:37:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG43658-PF 1563 CG43658-PF 1..1458 1..1458 7600 100 Plus
CG43658-PH 1458 CG43658-PH 1..1458 1..1458 7600 100 Plus
CG43658-PG 1563 CG43658-PG 1..1458 1..1458 7600 100 Plus
CG43658-PE 1458 CG43658-PE 1..1458 1..1458 7600 100 Plus
CG43658-PD 1736 CG43658-PD 279..1736 1..1458 7600 100 Plus