SD03330.complete Sequence
2256 bp (2256 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069791
> SD03330.complete
CTCGTCCAGCCGGTTAATTTTTTTGCACAAGCGCTGGACAGAAAAGTGTA
ATTAAGCGGCTTAAAACGGGTTTACATTTATAGTATAACTTGTAAATAAA
CAGTTAAGGATTATAATATTATTGGAATACAAGTTTCCAACGCACAACCA
AAAGATTTGGTAGAAAGTCGGCCAGCTTGTCCCGCAAATTTTCCCACAGG
GGTGTGTGTATAACAAAATGGCGTCCTCGCAAGTCTCAAACAAATCGGGC
TCCGGTTGGCCGCGCCGCGGAAGCCAAGGCCAAGCGGATGCAGCCAGCAG
CAATAACAACGGTACCCAGAAGTACACCAACCAGGCGCTAACCATCAATC
GCACCATCAACTTATACCCCCTTACGAACTACACATTCGGCACCAAGGAG
CCGCTCTTTGAGAAGGATCCGTCGGTGCCATCCCGATTCCAGCGGATGCG
CGAGGAATTCGACCGGATCGGAATGCGGCGCTCCGTCGAGGGAGTGCTTC
TGGTCCACGAGCACGGACTGCCACATGTCTTGCTCCTGCAGCTGGGCACC
ACGTTCTTCAAATTGCCCGGTGGCGAGCTAAACGCCGGCGAGGATGAGGT
CGAGGGCCTCAAGAGATTGCTATCCGAGACGCTGGGTCGTCAGGACGGCG
TAAAGCAGGAGTGGATTGTTGAGGACACGATTGGGAACTGGTGGCGGCCG
AACTTTGAGCCACCGCAATATCCATACATTCCGCCGCACATCACCAAGCC
CAAGGAGCACAAGCGGCTTTTCCTCGTCCAGCTACATGAAAAGGATACGG
ACGGGAACGCCAGTTACGATGTACCCTGAGCAGTTCCATTAGCGCCGTGT
GTGTCGTATCTACCCAACTCTAATCTCAAGAGTGCAATGCCATAGAACAA
CAAATCGAGCAAACAGAACAGATCAAACAGAAAAGAAACAAACAGATCGC
AAAAGCTGGCGCAGGCGACTCCTTAGTTAGTTTTGATTCTAGTCCAATTG
TACAACATGTCGAAAATCAAATTCAAATTGTATTTTTGCTCAGGACTGAG
TGTTGGCATATTTTGTTATTTCCCGATTTTTATCATTCGAAATTCAAAGA
TTGTTCTTGTACTTAATTTTGTAAATATGTCGACATACTTGTGAGACTGA
GCGCAGCAATGTTATCCTTCTATTTACATATTTTATTTATTTCCTAGCTT
CTATTCTTACTTTTGTGAAGTGTCATGTGTCGTTCATCTTAAGGTTGTTG
TGTATTTATCGAAAGCAATCCAATCCATCGGGCAGGCAGCAGAAGAGCAT
TGTAACGTTGCTGGCTGTCGCAGTCATGTGCCCAAATCTCGCGTGTTTTG
CAGATTTGCACGCATGCTGGGCAGTCAGGTCGCAAGTCGCTCCTTAAATT
AAGCACTCGTTTATGTAAACACAAGCAAATACTGTTTATACCTTTTTTGG
CCCTTACGCATTCGCTGTGCGCTGAAATGAACTGATGTTGTCCACCAGCT
GAAGCATTTCAGCGCACAATTCGAACCGCACTTATCATGTATAATGTTGC
TCTAAATTGAAATTATGTTCATAACTGATATTAGGAGACATCGCTGGGCC
AGCAAAGTGCCGGTCATGCTTTGCAAGTCGCAGCGAATCCAATTAATTAG
TCTAACGTAACCAACTATGAATGTAAAACGAAACGCATACGACTCTTTAT
ATCATACGGCTGCGAAATGATTCTTAATATGTAAATTGTACAACCGATTG
TAATATCCCTAGATGATATATCCTGTGAATTTCAATGTTCGTTGATATCT
CTACATACATGAATTCTGTCTCTATCGTTTTCCATAATCTAGCACTATTT
GCTGTACCCAAAAATTATAAGCTTGTTGCTGCGCCATTATTCGAGCTATA
CGACAACTCGCAAGGATATGGACCCATTATCTCATCTCTGCCGCAGGCCC
TCTGCAGATTCAACTTTATCTACATGTAAGGGCAGACGGAGGAGGGGCCC
ACGTCCAGCAATAGTTAAGCATCAACAGCAGCAGCAGCAGCACCAACGAT
AGCGCTACCTAACTGATTTCAGCACCACAGATCAGCCCGTAGATTTCCAT
TTCATGTGTGTGTGTAAACGTACATAATTGTATTGCAGATAAAATGGAAA
GCCAGTCTCTTTCACTTGGCAAATAGAGTCGACAAAATTTTGTGCTTTAT
TTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA
SD03330.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 19:58:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3689.b | 2597 | CG3689.b | 147..2351 | 1..2205 | 10995 | 99.9 | Plus |
CG3689-RB | 2348 | CG3689-RB | 147..2348 | 1..2202 | 10980 | 99.9 | Plus |
CG3689.a | 1231 | CG3689.a | 401..831 | 364..794 | 2155 | 100 | Plus |
CG3689.a | 1231 | CG3689.a | 831..1194 | 1842..2205 | 1820 | 100 | Plus |
CG3689.a | 1231 | CG3689.a | 20..384 | 1..365 | 1810 | 99.7 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:55:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 9404074..9405237 | 794..1957 | 5820 | 100 | Plus |
chr3L | 24539361 | chr3L | 9402979..9403341 | 1..363 | 1815 | 100 | Plus |
chr3L | 24539361 | chr3L | 9403399..9403663 | 364..628 | 1325 | 100 | Plus |
chr3L | 24539361 | chr3L | 9405305..9405557 | 1952..2204 | 1265 | 100 | Plus |
chr3L | 24539361 | chr3L | 9403735..9403902 | 627..794 | 840 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:46:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:55:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9412154..9413317 | 794..1957 | 5805 | 99.9 | Plus |
3L | 28110227 | 3L | 9411059..9411421 | 1..363 | 1800 | 99.7 | Plus |
3L | 28110227 | 3L | 9411479..9411743 | 364..628 | 1325 | 100 | Plus |
3L | 28110227 | 3L | 9413385..9413638 | 1952..2205 | 1270 | 100 | Plus |
3L | 28110227 | 3L | 9411815..9411982 | 627..794 | 840 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:23:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 9405254..9406417 | 794..1957 | 5805 | 99.9 | Plus |
3L | 28103327 | 3L | 9404159..9404521 | 1..363 | 1800 | 99.7 | Plus |
3L | 28103327 | 3L | 9404579..9404843 | 364..628 | 1325 | 100 | Plus |
3L | 28103327 | 3L | 9406485..9406738 | 1952..2205 | 1270 | 100 | Plus |
3L | 28103327 | 3L | 9404915..9405082 | 627..794 | 840 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 20:55:15 has no hits.
SD03330.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:56:30 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 9402979..9403341 | 1..363 | 100 | -> | Plus |
chr3L | 9403399..9403663 | 364..628 | 100 | -> | Plus |
chr3L | 9403737..9403902 | 629..794 | 100 | -> | Plus |
chr3L | 9404075..9405237 | 795..1957 | 100 | -> | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 20:58:54 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3689-RB | 1..612 | 218..829 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:30:56 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3689-RB | 1..612 | 218..829 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:42:38 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3689-RB | 1..612 | 218..829 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 19:58:36 has no hits.
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:59:23 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3689-RB | 1..612 | 218..829 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:09:10 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3689-RB | 1..2202 | 1..2202 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:30:56 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3689-RB | 1..2202 | 1..2202 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:42:38 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3689-RB | 22..2225 | 1..2204 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:58:36 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3689-RB | 1..2202 | 1..2202 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:59:23 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3689-RB | 22..2225 | 1..2204 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:56:30 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9411817..9411982 | 629..794 | 100 | -> | Plus |
3L | 9411059..9411421 | 1..363 | 99 | -> | Plus |
3L | 9411479..9411743 | 364..628 | 100 | -> | Plus |
3L | 9412155..9413317 | 795..1957 | 99 | -> | Plus |
3L | 9413391..9413637 | 1958..2204 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:56:30 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9411817..9411982 | 629..794 | 100 | -> | Plus |
3L | 9411059..9411421 | 1..363 | 99 | -> | Plus |
3L | 9411479..9411743 | 364..628 | 100 | -> | Plus |
3L | 9412155..9413317 | 795..1957 | 99 | -> | Plus |
3L | 9413391..9413637 | 1958..2204 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:56:30 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9411817..9411982 | 629..794 | 100 | -> | Plus |
3L | 9411059..9411421 | 1..363 | 99 | -> | Plus |
3L | 9411479..9411743 | 364..628 | 100 | -> | Plus |
3L | 9412155..9413317 | 795..1957 | 99 | -> | Plus |
3L | 9413391..9413637 | 1958..2204 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:42:38 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9404159..9404521 | 1..363 | 99 | -> | Plus |
arm_3L | 9404579..9404843 | 364..628 | 100 | -> | Plus |
arm_3L | 9404917..9405082 | 629..794 | 100 | -> | Plus |
arm_3L | 9405255..9406417 | 795..1957 | 99 | -> | Plus |
arm_3L | 9406491..9406737 | 1958..2204 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:35:00 Download gff for
SD03330.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9404159..9404521 | 1..363 | 99 | -> | Plus |
3L | 9404579..9404843 | 364..628 | 100 | -> | Plus |
3L | 9404917..9405082 | 629..794 | 100 | -> | Plus |
3L | 9405255..9406417 | 795..1957 | 99 | -> | Plus |
3L | 9406491..9406737 | 1958..2204 | 100 | | Plus |
SD03330.pep Sequence
Translation from 217 to 828
> SD03330.pep
MASSQVSNKSGSGWPRRGSQGQADAASSNNNGTQKYTNQALTINRTINLY
PLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHG
LPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQDGVKQEWI
VEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKDTDGNASY
DVP*
SD03330.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:07:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF10694-PA | 204 | GF10694-PA | 1..204 | 1..203 | 1060 | 98.5 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:07:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG15373-PA | 203 | GG15373-PA | 1..203 | 1..203 | 1082 | 100 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:07:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH15136-PA | 203 | GH15136-PA | 1..203 | 1..203 | 1034 | 97.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3689-PB | 203 | CG3689-PB | 1..203 | 1..203 | 1088 | 100 | Plus |
CG3689-PC | 237 | CG3689-PC | 1..192 | 1..192 | 1027 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:07:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI12073-PA | 203 | GI12073-PA | 1..203 | 1..203 | 1027 | 96.6 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:07:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL22627-PA | 242 | GL22627-PA | 1..187 | 1..192 | 940 | 93.3 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:07:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA17613-PA | 198 | GA17613-PA | 1..198 | 1..203 | 989 | 93.1 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:07:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM25145-PA | 203 | GM25145-PA | 1..203 | 1..203 | 1082 | 100 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:07:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD14179-PA | 203 | GD14179-PA | 1..203 | 1..203 | 1082 | 100 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:07:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ13342-PA | 203 | GJ13342-PA | 1..203 | 1..203 | 1027 | 96.6 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:07:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK17156-PA | 205 | GK17156-PA | 1..205 | 1..203 | 1000 | 94.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:07:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE20835-PA | 203 | GE20835-PA | 1..203 | 1..203 | 1082 | 100 | Plus |
SD03330.hyp Sequence
Translation from 217 to 828
> SD03330.hyp
MASSQVSNKSGSGWPRRGSQGQADAASSNNNGTQKYTNQALTINRTINLY
PLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHG
LPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQDGVKQEWI
VEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKDTDGNASY
DVP*
SD03330.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:52:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3689-PB | 203 | CG3689-PB | 1..203 | 1..203 | 1088 | 100 | Plus |
CG3689-PC | 237 | CG3689-PC | 1..192 | 1..192 | 1027 | 100 | Plus |