BDGP Sequence Production Resources |
Search the DGRC for SD03467
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 34 |
Well: | 67 |
Vector: | pOT2 |
Associated Gene/Transcript | Sec5-RA |
Protein status: | SD03467.pep: gold |
Preliminary Size: | 3162 |
Sequenced Size: | 2878 |
Gene | Date | Evidence |
---|---|---|
CG8843 | 2001-01-01 | Release 2 assignment |
CG8843 | 2001-11-09 | Blastp of sequenced clone |
CG8843 | 2003-01-01 | Sim4 clustering to Release 3 |
sec5 | 2008-04-29 | Release 5.5 accounting |
sec5 | 2008-08-15 | Release 5.9 accounting |
sec5 | 2008-12-18 | 5.12 accounting |
2878 bp (2878 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069793
> SD03467.complete AAAGTTCTGTTCTCTATTGTTTTTATTGCATTTTGATCAGTTTTTCCGCA TCATATAGCATACGATGGCGCCGCAGCCAGTGGTTACGGGGCTATCTCCG AAGGAGGGTCCTCCTGGCACCCGCGTTATCATTCGCGGCGAGTTCCTGGG CACCCGAGTGCAAGATCTAATTGGTCTAAAAATCTGCGGTTCAGATTGTC TGCTGTCGGCGGAGTGGAAATCACCCAATAAAATCATCGCACGCACTGGT CCGGCGAAGGGAAAAGGCGATATCATAGTGACCACTTTAAGCGGCGGAGT GGGCACGTCCACGGTTCAGTTTCGTGCATACCACGAGACCATTGGCCCGC TCAAGGAGTCCGCCGTGTGGATCGAGGAGTCGCCCTCGCAGAATTTTGCC TGGGGTCGGCGCACCCTAGCCCAATCCGGACTGACGCAGGAGGATCCACT TGGGCTGTCCATCGAGGGTAACGAGCAGAAGATCCCCGAGGACCTCCGCG ATCTCTTTCCCGAAGCCTGCGGGGATCTGTCGCAGGAGCACTTCTCCCCG GCCTGGTTCCTGCTTGAAAATCACCTGGCCACCTCCTTCGAGGATCTCAA GGCGGGCCTGTCCTACTTGAAGCGGAAAGTGGAAAGCCAGAAGGAAGGTC AGTTGTCCTTCCTCAAGTCCAATGCAGGCTCGGTGATTGACCAGCTCGAT ACGCTGATGAACATCCGAGACAAGCTACAGGAGGATGTCAAGCTACACGG CAATGAGACCCTAAATATCTTGGAAACATCCATAGAGAACTCCATTAGCG AATCGCAAAAGATATTCACGGATGTGCTGGTGCGCAAAGAGAAGGCGGAT TCCACGCGGTCCGTTCTGTTCGCCCTGTCGCGGCACAAGTTCCTCTTCTG TCTGCCCAATTCGGTGGACAGACGTGCCAAGGCGGGTGAATATGACATTG TGGTTAACGACTACTCGCGCGCCAAGAACCTCTTTGGCAAGACGGAGATT CCCATTTTCCGCAAGGTGCTCGAGGAGGTCGACCACAGGATTCTGTCAAT AAGGAAACAACTGCACGAGAAGGTGGTCAAGATGCCACAGAGCGTGGAGC AACAGAAGAAGCTCATCAAGGCGCTGATCAGTCTGGAACTGCAGCAGAGC GGAACTCCCATTGGCGATAAACTGCGCAACATCGATCCCGCCTGGGATGC CATCGAGGCCAGAGCCAAATATCTGGAGTGGACATTTCGCCAGACATTTG ATCAGCACACCAGCAAGGATTCGGGTGCCCAGGAAAAGGCAAAGAACAGG GATTCCAGCCAGGCGCCCAATCGGGTTAACTTCTGCGAAGAACTGTGCGA CATTGCCGCCTCCCAGCTGCCGGACTTGTGGCGTCTGGGCCAGCTATACT TCACCGGCGAGCTACGCGGACCTCATGATCCCAAGCCAGGGGATTTCAAG CGAATGGTTTTGAACGCCATCGAGAAGTTCTGTGTCTACTTGAGGTTGGC CATTCTCATTGCCACGGATCAGCGCGCCCTGCGTCAGTCCAGCGGCTTGG CTTGGCCCATCGGCTCCGCATCGGCAACACATCAGTTTCTACCCTGGATT CCGCAGTGCCTGCGTTTCACGAGGATAGCCTATGCCACGCTCATCAGCCT GGATCTGCCCTCGGAAGCGCTGGACATCATACAGAAACTGATCGATGAGG TGCGACTTTTCTGCTTCTCAATTATCTTCAAACGGGCCACGGATCGGTGC AAAAAGCTGGGCAGCCAGGAGACCTGGGAACTGGGCGTGGAGGAATATCC AGGTGCCACATTGTTACCCGCCGCCTTGGAAACATTGCTCATCGAAACGC TGGACGAGGTGCAATCTGTGTGCATGCAAAGGGAGACCCGGGAGGGCAAT CTCCTCGAGCCGCAGTCGGATGGACAGAGAGAGGTGACACAGCGACTACA AGAATTCCTATCCGCGTTTAGCGCGGTGATCGAGGAGCTGGCCTTCCACT CCCACGACGAGGAGACGCCCACCCACAATGTGTCGCAGCTACTTGGATTC CCCAATGCCCAGCAGCCAGATTCGGTGGCTGGAAGCGGCGGAGCAGCGGC TGTGACCTGGGAGCAGCGCATGCTCTGTTGCCTGGCCAACTATGCGTACT GCAACAAGATCTTCTTCCCGCGCCTTGGTGACATCTTCGTTCGCTACGGT TACCCGCTGCCCACGCTGGCAATCGAAACTGCTCGCTACACGGTTAACCA GCTCTTTACCAATCTTCTGGAGGAGTACGTCGAGCATAAGGGCGATCCGC TGGTCGGCACCATCGAGCCCTCCATGTATCTGGGTCGTTTCCAGTGGGAT CACGAGATGGAGATCGGCCAGCTGCGTCCTTACGCTCACGAGTGCTGCGA TAATTTGGTTGGTGTCTACTCCGAGATCTACAGCATTTCACCGGCACTGC TGCGACCCATCCTGGAGTCCATTGTGCAAACGATATCCGAAGAGCTGGCC CGTCTGATGAGCTGTGTCCAGCGCTTTAGCTTCACGGGAGCGATTCAGGC CCACGTGGATATCCGTCTATTGAGGGACTCCCTGGAAGGTTACGTCAATG AGACTGCCAAGAACTACTTCATGGAAGCGCTGGAGGCCATCAATCCGCCC CTGAGTGGCGAGCAGAAGCGTAAGGCGGACGAGATTCTGGAGCGGGTCAA GCGGAACATGCGTCTGCAGCTGCTCTGCTTCAGTGTCAAGGACCCCTAGG CACATTCCACTGCAGGGCGCAGCCCATGTAGATAGCGTATACTTTAACTA GCTTGTGATTACCCATGTTCTAGGGATAAATCTTTATTCGATTGCAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 3457826..3459648 | 789..2611 | 8920 | 99.3 | Plus |
chr2L | 23010047 | chr2L | 3457156..3457771 | 173..788 | 2915 | 98.2 | Plus |
chr2L | 23010047 | chr2L | 3459705..3459939 | 2611..2845 | 1160 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 3456916..3457090 | 1..175 | 815 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 3458254..3460076 | 789..2611 | 9100 | 99.9 | Plus |
2L | 23513712 | 2L | 3457584..3458199 | 173..788 | 3050 | 99.7 | Plus |
2L | 23513712 | 2L | 3460133..3460368 | 2611..2846 | 1165 | 99.6 | Plus |
2L | 23513712 | 2L | 3457342..3457516 | 1..175 | 875 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 3458254..3460076 | 789..2611 | 9100 | 99.9 | Plus |
2L | 23513712 | 2L | 3457584..3458199 | 173..788 | 3050 | 99.6 | Plus |
2L | 23513712 | 2L | 3460133..3460368 | 2611..2846 | 1165 | 99.5 | Plus |
2L | 23513712 | 2L | 3457342..3457516 | 1..175 | 875 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 3456916..3457088 | 1..173 | 97 | -> | Plus |
chr2L | 3457157..3457771 | 174..788 | 98 | -> | Plus |
chr2L | 3457826..3459647 | 789..2610 | 99 | -> | Plus |
chr2L | 3459705..3459939 | 2611..2845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec5-RA | 1..2685 | 65..2749 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec5-RA | 1..2685 | 65..2749 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec5-RA | 1..2685 | 65..2749 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec5-RA | 1..2685 | 65..2749 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec5-RA | 1..2685 | 65..2749 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec5-RA | 14..2858 | 1..2845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec5-RA | 14..2858 | 1..2845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec5-RA | 41..2885 | 1..2845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sec5-RA | 14..2858 | 1..2845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sec5-RA | 41..2885 | 1..2845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3457342..3457514 | 1..173 | 100 | -> | Plus |
2L | 3457585..3458199 | 174..788 | 99 | -> | Plus |
2L | 3458254..3460075 | 789..2610 | 99 | -> | Plus |
2L | 3460133..3460367 | 2611..2845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3457342..3457514 | 1..173 | 100 | -> | Plus |
2L | 3457585..3458199 | 174..788 | 99 | -> | Plus |
2L | 3458254..3460075 | 789..2610 | 99 | -> | Plus |
2L | 3460133..3460367 | 2611..2845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3457342..3457514 | 1..173 | 100 | -> | Plus |
2L | 3457585..3458199 | 174..788 | 99 | -> | Plus |
2L | 3458254..3460075 | 789..2610 | 99 | -> | Plus |
2L | 3460133..3460367 | 2611..2845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 3457342..3457514 | 1..173 | 100 | -> | Plus |
arm_2L | 3457585..3458199 | 174..788 | 99 | -> | Plus |
arm_2L | 3458254..3460075 | 789..2610 | 99 | -> | Plus |
arm_2L | 3460133..3460367 | 2611..2845 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3457585..3458199 | 174..788 | 99 | -> | Plus |
2L | 3458254..3460075 | 789..2610 | 99 | -> | Plus |
2L | 3460133..3460367 | 2611..2845 | 99 | Plus | |
2L | 3457342..3457514 | 1..173 | 100 | -> | Plus |
Translation from 64 to 2748
> SD03467.pep MAPQPVVTGLSPKEGPPGTRVIIRGEFLGTRVQDLIGLKICGSDCLLSAE WKSPNKIIARTGPAKGKGDIIVTTLSGGVGTSTVQFRAYHETIGPLKESA VWIEESPSQNFAWGRRTLAQSGLTQEDPLGLSIEGNEQKIPEDLRDLFPE ACGDLSQEHFSPAWFLLENHLATSFEDLKAGLSYLKRKVESQKEGQLSFL KSNAGSVIDQLDTLMNIRDKLQEDVKLHGNETLNILETSIENSISESQKI FTDVLVRKEKADSTRSVLFALSRHKFLFCLPNSVDRRAKAGEYDIVVNDY SRAKNLFGKTEIPIFRKVLEEVDHRILSIRKQLHEKVVKMPQSVEQQKKL IKALISLELQQSGTPIGDKLRNIDPAWDAIEARAKYLEWTFRQTFDQHTS KDSGAQEKAKNRDSSQAPNRVNFCEELCDIAASQLPDLWRLGQLYFTGEL RGPHDPKPGDFKRMVLNAIEKFCVYLRLAILIATDQRALRQSSGLAWPIG SASATHQFLPWIPQCLRFTRIAYATLISLDLPSEALDIIQKLIDEVRLFC FSIIFKRATDRCKKLGSQETWELGVEEYPGATLLPAALETLLIETLDEVQ SVCMQRETREGNLLEPQSDGQREVTQRLQEFLSAFSAVIEELAFHSHDEE TPTHNVSQLLGFPNAQQPDSVAGSGGAAAVTWEQRMLCCLANYAYCNKIF FPRLGDIFVRYGYPLPTLAIETARYTVNQLFTNLLEEYVEHKGDPLVGTI EPSMYLGRFQWDHEMEIGQLRPYAHECCDNLVGVYSEIYSISPALLRPIL ESIVQTISEELARLMSCVQRFSFTGAIQAHVDIRLLRDSLEGYVNETAKN YFMEALEAINPPLSGEQKRKADEILERVKRNMRLQLLCFSVKDP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21589-PA | 895 | GF21589-PA | 1..895 | 1..894 | 4550 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24944-PA | 887 | GG24944-PA | 1..887 | 1..894 | 4687 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11584-PA | 899 | GH11584-PA | 1..899 | 1..894 | 4361 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sec5-PA | 894 | CG8843-PA | 1..894 | 1..894 | 4625 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17153-PA | 900 | GI17153-PA | 1..900 | 1..894 | 4300 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19244-PA | 896 | GL19244-PA | 1..896 | 1..894 | 4432 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21362-PA | 897 | GA21362-PA | 1..897 | 1..894 | 4463 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11139-PA | 894 | GM11139-PA | 1..894 | 1..894 | 4762 | 99.4 | Plus |
Dsec\GM22585-PA | 879 | GM22585-PA | 1..879 | 1..894 | 4390 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23233-PA | 894 | GD23233-PA | 1..894 | 1..894 | 4776 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17657-PA | 895 | GJ17657-PA | 1..895 | 1..894 | 4408 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23817-PA | 894 | GK23817-PA | 1..894 | 1..894 | 4405 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18235-PA | 894 | GE18235-PA | 1..894 | 1..894 | 4761 | 99.6 | Plus |
Translation from 64 to 2748
> SD03467.hyp MAPQPVVTGLSPKEGPPGTRVIIRGEFLGTRVQDLIGLKICGSDCLLSAE WKSPNKIIARTGPAKGKGDIIVTTLSGGVGTSTVQFRAYHETIGPLKESA VWIEESPSQNFAWGRRTLAQSGLTQEDPLGLSIEGNEQKIPEDLRDLFPE ACGDLSQEHFSPAWFLLENHLATSFEDLKAGLSYLKRKVESQKEGQLSFL KSNAGSVIDQLDTLMNIRDKLQEDVKLHGNETLNILETSIENSISESQKI FTDVLVRKEKADSTRSVLFALSRHKFLFCLPNSVDRRAKAGEYDIVVNDY SRAKNLFGKTEIPIFRKVLEEVDHRILSIRKQLHEKVVKMPQSVEQQKKL IKALISLELQQSGTPIGDKLRNIDPAWDAIEARAKYLEWTFRQTFDQHTS KDSGAQEKAKNRDSSQAPNRVNFCEELCDIAASQLPDLWRLGQLYFTGEL RGPHDPKPGDFKRMVLNAIEKFCVYLRLAILIATDQRALRQSSGLAWPIG SASATHQFLPWIPQCLRFTRIAYATLISLDLPSEALDIIQKLIDEVRLFC FSIIFKRATDRCKKLGSQETWELGVEEYPGATLLPAALETLLIETLDEVQ SVCMQRETREGNLLEPQSDGQREVTQRLQEFLSAFSAVIEELAFHSHDEE TPTHNVSQLLGFPNAQQPDSVAGSGGAAAVTWEQRMLCCLANYAYCNKIF FPRLGDIFVRYGYPLPTLAIETARYTVNQLFTNLLEEYVEHKGDPLVGTI EPSMYLGRFQWDHEMEIGQLRPYAHECCDNLVGVYSEIYSISPALLRPIL ESIVQTISEELARLMSCVQRFSFTGAIQAHVDIRLLRDSLEGYVNETAKN YFMEALEAINPPLSGEQKRKADEILERVKRNMRLQLLCFSVKDP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sec5-PA | 894 | CG8843-PA | 1..894 | 1..894 | 4625 | 100 | Plus |