BDGP Sequence Production Resources |
Search the DGRC for SD03549
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 35 |
Well: | 49 |
Vector: | pOT2 |
Associated Gene/Transcript | esc-RA |
Protein status: | SD03549.pep: gold |
Preliminary Size: | 1722 |
Sequenced Size: | 1744 |
Gene | Date | Evidence |
---|---|---|
CG14941 | 2001-01-01 | Release 2 assignment |
CG14941 | 2001-11-09 | Blastp of sequenced clone |
CG14941 | 2003-01-01 | Sim4 clustering to Release 3 |
esc | 2008-04-29 | Release 5.5 accounting |
esc | 2008-08-15 | Release 5.9 accounting |
esc | 2008-12-18 | 5.12 accounting |
1744 bp (1744 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069796
> SD03549.complete GGTCACACCATTGCCGCCAAAAAAAAACATTTTCATTCGCCTCGTTATTT AAACATTTAAAAAAAGCATTATCGAATAGTTCATTGAAGTCGCGGCCTAA TTTGGGTTTCATTTAACCGTACAAACGTGCCGCGCTTTCGAAATGAGCAG TGATAAAGTGAAAAACGGCAACGAGCCCGAGGAGTCGGAGGAATCATGCG GCGATGAGTCGGCCAGCTATACCACCAACAGCACCACCTCGCGCAGCAAG TCCCCGTCATCCAGCACGCGCAGCAAGCGCCGCGGTCGCCGGAGCACCAA ATCGAAGCCAAAAAGTCGCGCCGCCTACAAATACGACACCCACGTGAAGG AGAACCACGGAGCCAACATCTTCGGCGTAGCCTTCAACACGCTGCTGGGC AAGGATGAGCCACAGGTCTTCGCTACGGCGGGCAGCAACCGGGTGACCGT CTACGAGTGCCCTCGACAGGGCGGGATGCAGCTGCTCCACTGCTATGCAG ATCCGGATCCCGATGAAGTATTTTACACCTGCGCCTGGTCGTACGACCTT AAGACCTCTTCACCTCTCCTGGCCGCTGCTGGATACCGCGGAGTCATCCG GGTTATTGATGTCGAGCAGAATGAGGCGGTGGGCAACTACATTGGCCATG GACAGGCCATTAACGAGCTGAAGTTCCATCCGCACAAGCTACAGCTTTTG CTTTCGGGCAGCAAGGATCACGCGATAAGATTGTGGAACATCCAGAGCCA TGTGTGCATTGCCATCCTGGGCGGAGTGGAGGGACATCGCGATGAGGTGC TGTCCATCGACTTTAATATGCGTGGAGATCGCATTGTGTCGAGCGGCATG GATCACTCGCTGAAGCTGTGGTGTCTGAATACGCCCGAGTTCCATCACAA GATCGAACTGTCGAACACTTTCAGCCAGGAGAAGTCAACGCTGCCTTTCC CCACGGTGACCAAGCACTTCCCCGATTTTTCAACGCGGGATATACACAGG AACTATGTGGACTGTGTGCAGTGGTTCGGCAACTTTGTGCTCTCCAAGTC CTGCGAAAATGCCATTGTCTGCTGGAAGCCGGGACAACTACATCAGAGTT TCGAGCAGGTGAAGCCGAGCGACTCCTCCTGCACGATAATCGCGGAATTC GAGTACGATGAGTGCGAGATCTGGTTCGTGAGATTCGGCTTCAATCCGTG GCAGAAGGTGATTGCCCTGGGCAATCAGCAGGGCAAGGTGTATGTGTGGG AGCTGGATCCCAGCGATCCCGAGGGCGCACACATGACCACCCTGCACAAT TCGCGTAGCGTGGCCACTGTGCGCCAGATCGCCTTCTCCCGCGATGCCAG CGTACTGGTCTACGTGTGCGATGACGCCACCGTGTGGCGATGGAACCGCA GACAAACGACTTCCATCTGATGGCGCAGCTGGGCGCAACCACAAACCAAA TCTCACGTGGCCAAAACTTACAACATTTCCCTCAATTAGTTCCTAGTTGG TTAGCATTAAGATATAGAATTACGCTCCTGTGCTGTTCCAAATTATTTCA AGTAAATCCAATTAATAGTTGGATGAGATTTAAATATGTTAAGCCGGTTG CTTTTTAGATGTAAGAACGAATAGTTGTTGCTTACTCCGCTGCCTTTATT TATTGTAAATAAAGTGAGTACATTGTAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 11825865..11827032 | 1676..509 | 5795 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 11827836..11828038 | 203..1 | 1000 | 99.5 | Minus |
chr2L | 23010047 | chr2L | 11827397..11827568 | 508..337 | 860 | 100 | Minus |
chr2L | 23010047 | chr2L | 11827631..11827764 | 336..203 | 670 | 100 | Minus |
chr2L | 23010047 | chr2L | 11990354..11990802 | 635..1083 | 325 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11827202..11828371 | 1678..509 | 5730 | 99.3 | Minus |
2L | 23513712 | 2L | 11829175..11829377 | 203..1 | 1000 | 99.5 | Minus |
2L | 23513712 | 2L | 11828736..11828907 | 508..337 | 860 | 100 | Minus |
2L | 23513712 | 2L | 11828970..11829103 | 336..203 | 670 | 100 | Minus |
2L | 23513712 | 2L | 11991701..11992149 | 635..1083 | 325 | 71.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11827202..11828371 | 1678..509 | 5730 | 99.3 | Minus |
2L | 23513712 | 2L | 11829175..11829377 | 203..1 | 1000 | 99.5 | Minus |
2L | 23513712 | 2L | 11828736..11828907 | 508..337 | 860 | 100 | Minus |
2L | 23513712 | 2L | 11828970..11829103 | 336..203 | 670 | 100 | Minus |
2L | 23513712 | 2L | 11992029..11992149 | 963..1083 | 230 | 79.3 | Plus |
2L | 23513712 | 2L | 11991836..11991954 | 770..888 | 220 | 78.9 | Plus |
2L | 23513712 | 2L | 11991701..11991748 | 635..682 | 165 | 89.5 | Plus |
2L | 23513712 | 2L | 11992228..11992301 | 1162..1235 | 145 | 79.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11825865..11827032 | 509..1676 | 99 | <- | Minus |
chr2L | 11827397..11827568 | 337..508 | 100 | <- | Minus |
chr2L | 11827631..11827764 | 203..336 | 100 | <- | Minus |
chr2L | 11827837..11828038 | 1..202 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
esc-RA | 1..1278 | 143..1420 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
esc-RA | 1..1278 | 143..1420 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
esc-RA | 1..1278 | 143..1420 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
esc-RA | 1..1278 | 143..1420 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
esc-RA | 1..1278 | 143..1420 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
esc-RA | 26..1701 | 1..1676 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
esc-RA | 26..1701 | 1..1676 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
esc-RA | 29..1704 | 1..1676 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
esc-RA | 26..1701 | 1..1676 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
esc-RA | 29..1704 | 1..1676 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11827204..11828371 | 509..1676 | 99 | <- | Minus |
2L | 11828736..11828907 | 337..508 | 100 | <- | Minus |
2L | 11828970..11829103 | 203..336 | 100 | <- | Minus |
2L | 11829176..11829377 | 1..202 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11827204..11828371 | 509..1676 | 99 | <- | Minus |
2L | 11828736..11828907 | 337..508 | 100 | <- | Minus |
2L | 11828970..11829103 | 203..336 | 100 | <- | Minus |
2L | 11829176..11829377 | 1..202 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11827204..11828371 | 509..1676 | 99 | <- | Minus |
2L | 11828736..11828907 | 337..508 | 100 | <- | Minus |
2L | 11828970..11829103 | 203..336 | 100 | <- | Minus |
2L | 11829176..11829377 | 1..202 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11829176..11829377 | 1..202 | 99 | Minus | |
arm_2L | 11827204..11828371 | 509..1676 | 99 | <- | Minus |
arm_2L | 11828736..11828907 | 337..508 | 100 | <- | Minus |
arm_2L | 11828970..11829103 | 203..336 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11828736..11828907 | 337..508 | 100 | <- | Minus |
2L | 11828970..11829103 | 203..336 | 100 | <- | Minus |
2L | 11829176..11829377 | 1..202 | 99 | Minus | |
2L | 11827204..11828371 | 509..1676 | 99 | <- | Minus |
Translation from 142 to 1419
> SD03549.pep MSSDKVKNGNEPEESEESCGDESASYTTNSTTSRSKSPSSSTRSKRRGRR STKSKPKSRAAYKYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNR VTVYECPRQGGMQLLHCYADPDPDEVFYTCAWSYDLKTSSPLLAAAGYRG VIRVIDVEQNEAVGNYIGHGQAINELKFHPHKLQLLLSGSKDHAIRLWNI QSHVCIAILGGVEGHRDEVLSIDFNMRGDRIVSSGMDHSLKLWCLNTPEF HHKIELSNTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQWFGNFVL SKSCENAIVCWKPGQLHQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGF NPWQKVIALGNQQGKVYVWELDPSDPEGAHMTTLHNSRSVATVRQIAFSR DASVLVYVCDDATVWRWNRRQTTSI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23390-PA | 425 | GF23390-PA | 1..425 | 1..425 | 2139 | 94.6 | Plus |
Dana\GF15137-PA | 466 | GF15137-PA | 76..464 | 41..419 | 1323 | 60.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10294-PA | 688 | GG10294-PA | 310..688 | 46..425 | 1990 | 95.3 | Plus |
Dere\GG23752-PA | 463 | GG23752-PA | 36..461 | 2..419 | 1335 | 58.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13070-PA | 425 | GH13070-PA | 1..425 | 1..425 | 2140 | 93.2 | Plus |
Dgri\GH13063-PA | 462 | GH13063-PA | 66..460 | 34..419 | 1309 | 58.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
esc-PA | 425 | CG14941-PA | 1..425 | 1..425 | 2291 | 100 | Plus |
escl-PC | 462 | CG5202-PC | 35..460 | 2..419 | 1356 | 58.4 | Plus |
escl-PA | 462 | CG5202-PA | 35..460 | 2..419 | 1356 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17689-PA | 426 | GI17689-PA | 1..426 | 1..425 | 2110 | 91.1 | Plus |
Dmoj\GI17683-PA | 457 | GI17683-PA | 70..455 | 41..419 | 1287 | 59.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15273-PA | 449 | GL15273-PA | 1..400 | 1..401 | 2004 | 89.5 | Plus |
Dper\GL18539-PA | 463 | GL18539-PA | 41..461 | 8..419 | 1348 | 58.9 | Plus |
Dper\GL24512-PA | 787 | GL24512-PA | 251..469 | 150..374 | 153 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13369-PA | 424 | GA13369-PA | 1..424 | 1..425 | 2117 | 88.9 | Plus |
Dpse\GA18733-PA | 463 | GA18733-PA | 41..461 | 8..419 | 1345 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26550-PA | 425 | GM26550-PA | 1..425 | 1..425 | 2304 | 99.5 | Plus |
Dsec\GM26690-PA | 462 | GM26690-PA | 35..460 | 2..419 | 1346 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22153-PA | 425 | GD22153-PA | 1..425 | 1..425 | 2305 | 99.8 | Plus |
Dsim\GD23804-PA | 462 | GD23804-PA | 35..460 | 2..419 | 1342 | 58.4 | Plus |
Dsim\GD13377-PA | 169 | GD13377-PA | 58..163 | 21..122 | 217 | 45.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\esc-PA | 425 | GJ17475-PA | 1..425 | 1..425 | 2179 | 92.9 | Plus |
Dvir\GJ17469-PA | 454 | GJ17469-PA | 67..452 | 41..419 | 1277 | 59 | Plus |
Dvir\GJ19693-PA | 488 | GJ19693-PA | 389..486 | 142..243 | 151 | 31.4 | Plus |
Translation from 142 to 1419
> SD03549.hyp MSSDKVKNGNEPEESEESCGDESASYTTNSTTSRSKSPSSSTRSKRRGRR STKSKPKSRAAYKYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNR VTVYECPRQGGMQLLHCYADPDPDEVFYTCAWSYDLKTSSPLLAAAGYRG VIRVIDVEQNEAVGNYIGHGQAINELKFHPHKLQLLLSGSKDHAIRLWNI QSHVCIAILGGVEGHRDEVLSIDFNMRGDRIVSSGMDHSLKLWCLNTPEF HHKIELSNTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQWFGNFVL SKSCENAIVCWKPGQLHQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGF NPWQKVIALGNQQGKVYVWELDPSDPEGAHMTTLHNSRSVATVRQIAFSR DASVLVYVCDDATVWRWNRRQTTSI*