BDGP Sequence Production Resources |
Search the DGRC for SD03629
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 36 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2017-RA |
Protein status: | SD03629.pep: gold |
Preliminary Size: | 2362 |
Sequenced Size: | 2285 |
Gene | Date | Evidence |
---|---|---|
CG2017 | 2001-01-01 | Release 2 assignment |
CG2017 | 2001-07-04 | Blastp of sequenced clone |
CG2017 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2017 | 2008-04-29 | Release 5.5 accounting |
CG2017 | 2008-08-15 | Release 5.9 accounting |
CG2017 | 2008-12-18 | 5.12 accounting |
2285 bp (2285 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052084
> SD03629.complete CTCGTGCCGAAATGTAGGAAGTTTATGGTTTATAATAATTGATTGGATTG CTGGCGCAACTTTGGCGTCCCCGAAATTTGAAGTGTGTTGTGAGTGCTTA ACCCACATGAGTGCAAAATTGCCATGGCAACGTGAATCGAACACGAACAG CAACACCCACACAGAGACCATTGAAGATCCGCGCATTGTGGCGCAGTATT GCATCAGCAACTGCCAACACATTATGGAGTCCTTCCTGAGTCTCTTTGAT CCCAATCAGGACGACGGCTTCGAGGAAGAGCCCGAGCTCAATGGCAACAG CAGCGGCGGCGGAAGCAGCAGCAGCGACTATGAGACGGACGCCAATGCCA ACGAGTGCAGCGTAGTGAGCGGGATGCCCACCGAGCGGGGCAACCTGATC TTCGACTTCGAGCAGGGAATGCTGCCACCAGAGCCGCAGCTCGGAAATGT GGAGTACAAGCTGAAGCTGGTCAACCCGTCGAAGCAGCGATTCGAGCACC TGGTGACCCAGATGAAGTGGCGTCTGCGCGAGGGAAACGGCGAGGCCATC TACGAGATTGGAGTATCCGACGCCGGCTATCTGCAGGGACTCAGCGACAA GGACATGAATGCCTCGCTCACCACGCTCAAGCAGATGGCCCACAGCCTAG GAGCCAGTACCTCAGTGCTGCGGCGAAAGACCATCGCCGCCCGACGCGCC GTCGCCGAGGTACTGGTCCGTAAGATCCCCGACGACCAGCACAACATCGA GGTTCGGGTGGCGGTGCTCGGCGGAGCTGATGCAGGCAAATCCACTTTGC TGGGCGTGCTTACACAGGACGAGCTGGATAACGGACACGGCCGGGCGCGG CTCAATATGTTTAGGCACATGCACGAGATTCAGTCTGGCCGCACCTCCTG CATCTCCCACGAGACGCTTGGCTTCGATGCACTGGGTAATGTGGTCAACT ACAAGTACAATGAGATGATGACGGCAGAGGAGATTAGCGACAGGTCCAGC AAGCTGGTTACCTTCATGGATCTAGCCGGACACCGACGCTACATGCGCAC CACCGTGCAGGCACTGAGTGGATACTCACCCCACTACGCCATGCTGGTGG TATCGGCGGGCAGCGGTTGCAACGACACCACCGAGGAGCACTTGGCTATC GTGCGGGCACTGGACATGCCCTTCTTTGTATTGGTCACGAAGACAGATAT CACATCGCCGGACGCGACGGTACAGGAGTTGTGCAACCTGCTCACCACCA TTGGGTGCCGGAAGGTTCCCTTTGTGGTGACCAACACGGATGAGGCCATC TCCGCCGGGTCAAACCAGATCTCCGAGAACATTGTGCCCATCTTTTGCGT ATCGAATGTGACCGGCACGGGACTCAACCTAGTCACAAAGTTTCTGTACG TCCTTTCGCCCGGAATCAGCAACGCCGAGAAGGATCGACTCGAGCAGGAG TCTTGCGAGTTCCAGGTGGACGAGATCTTCCGGGTCTCTGACGTCGGACC CGTTGTGGGCGGTCTACTTGTCCAGGGCGTGCTGACCGAGAATATGGCAA TGAAGATTGGTCCGCTTCCCGATGGTAGCTTTCATCCCGTTACTGTTAAT ACTATCCACCGAAACAAGGCTCCTTGCCGAGTTGTCCGAGCTGGTCAGAG CGCTTCGCTGTCTTTCAGTATGGATCAGGATGTGCCCACGCTACGAAGTG GCATGGTTCTTTTGGGTGATATTGGAAATAGTCTGGATGAGCCCTACGGG ACCTTCTTCTTCCAAGCCAAGGTGTCCGTGCTGTTCCACGCCACGGCCAT CTATGTCGGCTTCCAAACCACAGTCCACATAGGCAGCATTCGCCAGACGG CCGTCATTCGGGGCATTATGGGCGGCGAGCGACTGGGCACAAACGATTGT GCTTCGGTGATGTTCGAGTTCGTCGGCCACCCGGAGTACGTGCGTCCTGG AATGCGCATCCTGTTCCGCGAGGGCACCAGCAAAGGAATCGGAGTTGTCA CGCAGGTGTTTCCGGTCAACAAGACAGGCATAAAGTAGAGAAGCGGGCCA GATGGATAGTTCCAATGACATATCTATATATCTCAAACAAAGATGACATG TACATATACTTAATTAGCAATTAGAGGGAGGCGTTAAATCTTAGGCAGAT CTTCTGTACACTTAGTTTCGGGTTCTGTGATTTTTCGTTTAAGCTCGGCT CACAATCGGATGTTGTGAGTAATCCTTCTCAATTAACCTTATTTCATTAA AATCCACCCCAAAATGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2017-RA | 2447 | CG2017-RA | 120..2378 | 10..2268 | 11295 | 100 | Plus |
CG2017.b | 2744 | CG2017.b | 667..2720 | 215..2268 | 10270 | 100 | Plus |
CG2017.a | 2593 | CG2017.a | 516..2569 | 215..2268 | 10270 | 100 | Plus |
CG2017.b | 2744 | CG2017.b | 39..243 | 10..214 | 1025 | 100 | Plus |
CG2017.a | 2593 | CG2017.a | 1..92 | 123..214 | 460 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1684288..1685167 | 1766..887 | 4400 | 100 | Minus |
chr3R | 27901430 | chr3R | 1685377..1686050 | 888..215 | 3370 | 100 | Minus |
chr3R | 27901430 | chr3R | 1683729..1684230 | 2267..1766 | 2510 | 100 | Minus |
chr3R | 27901430 | chr3R | 1687816..1688020 | 214..10 | 1025 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5858642..5859521 | 1766..887 | 4400 | 100 | Minus |
3R | 32079331 | 3R | 5859731..5860404 | 888..215 | 3370 | 100 | Minus |
3R | 32079331 | 3R | 5858082..5858584 | 2268..1766 | 2515 | 100 | Minus |
3R | 32079331 | 3R | 5862170..5862374 | 214..10 | 1025 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5599473..5600352 | 1766..887 | 4400 | 100 | Minus |
3R | 31820162 | 3R | 5600562..5601235 | 888..215 | 3370 | 100 | Minus |
3R | 31820162 | 3R | 5598913..5599415 | 2268..1766 | 2515 | 100 | Minus |
3R | 31820162 | 3R | 5603001..5603205 | 214..10 | 1025 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1683729..1684230 | 1766..2267 | 100 | <- | Minus |
chr3R | 1684289..1685166 | 888..1765 | 100 | <- | Minus |
chr3R | 1685378..1686050 | 215..887 | 94 | <- | Minus |
chr3R | 1687816..1688026 | 4..214 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2017-RA | 1..1932 | 107..2038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2017-RA | 1..1932 | 107..2038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2017-RA | 1..1932 | 107..2038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2017-RA | 1..1932 | 107..2038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2017-RA | 1..1932 | 107..2038 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2017-RA | 32..2295 | 4..2267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2017-RA | 32..2295 | 4..2267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2017-RA | 26..2289 | 4..2267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2017-RA | 32..2295 | 4..2267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2017-RA | 26..2289 | 4..2267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5858083..5858584 | 1766..2267 | 100 | <- | Minus |
3R | 5858643..5859520 | 888..1765 | 100 | <- | Minus |
3R | 5859732..5860404 | 215..887 | 100 | <- | Minus |
3R | 5862170..5862380 | 4..214 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5858083..5858584 | 1766..2267 | 100 | <- | Minus |
3R | 5858643..5859520 | 888..1765 | 100 | <- | Minus |
3R | 5859732..5860404 | 215..887 | 100 | <- | Minus |
3R | 5862170..5862380 | 4..214 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5858083..5858584 | 1766..2267 | 100 | <- | Minus |
3R | 5858643..5859520 | 888..1765 | 100 | <- | Minus |
3R | 5859732..5860404 | 215..887 | 100 | <- | Minus |
3R | 5862170..5862380 | 4..214 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1683805..1684306 | 1766..2267 | 100 | <- | Minus |
arm_3R | 1684365..1685242 | 888..1765 | 100 | <- | Minus |
arm_3R | 1685454..1686126 | 215..887 | 100 | <- | Minus |
arm_3R | 1687892..1688102 | 4..214 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5603001..5603211 | 4..214 | 98 | Minus | |
3R | 5598914..5599415 | 1766..2267 | 100 | <- | Minus |
3R | 5599474..5600351 | 888..1765 | 100 | <- | Minus |
3R | 5600563..5601235 | 215..887 | 100 | <- | Minus |
Translation from 4 to 2037
> SD03629.hyp SQNVGSLWFIIIDWIAGATLASPKFEVCCECLTHMSAKLPWQRESNTNSN THTETIEDPRIVAQYCISNCQHIMESFLSLFDPNQDDGFEEEPELNGNSS GGGSSSSDYETDANANECSVVSGMPTERGNLIFDFEQGMLPPEPQLGNVE YKLKLVNPSKQRFEHLVTQMKWRLREGNGEAIYEIGVSDAGYLQGLSDKD MNASLTTLKQMAHSLGASTSVLRRKTIAARRAVAEVLVRKIPDDQHNIEV RVAVLGGADAGKSTLLGVLTQDELDNGHGRARLNMFRHMHEIQSGRTSCI SHETLGFDALGNVVNYKYNEMMTAEEISDRSSKLVTFMDLAGHRRYMRTT VQALSGYSPHYAMLVVSAGSGCNDTTEEHLAIVRALDMPFFVLVTKTDIT SPDATVQELCNLLTTIGCRKVPFVVTNTDEAISAGSNQISENIVPIFCVS NVTGTGLNLVTKFLYVLSPGISNAEKDRLEQESCEFQVDEIFRVSDVGPV VGGLLVQGVLTENMAMKIGPLPDGSFHPVTVNTIHRNKAPCRVVRAGQSA SLSFSMDQDVPTLRSGMVLLGDIGNSLDEPYGTFFFQAKVSVLFHATAIY VGFQTTVHIGSIRQTAVIRGIMGGERLGTNDCASVMFEFVGHPEYVRPGM RILFREGTSKGIGVVTQVFPVNKTGIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2017-PA | 643 | CG2017-PA | 1..643 | 35..677 | 3317 | 100 | Plus |
CG2017-PE | 604 | CG2017-PE | 1..604 | 74..677 | 3103 | 100 | Plus |
CG2017-PB | 604 | CG2017-PB | 1..604 | 74..677 | 3103 | 100 | Plus |
CG2017-PC | 604 | CG2017-PC | 1..604 | 74..677 | 3103 | 100 | Plus |
CG2017-PD | 604 | CG2017-PD | 1..604 | 74..677 | 3103 | 100 | Plus |
Translation from 106 to 2037
> SD03629.pep MSAKLPWQRESNTNSNTHTETIEDPRIVAQYCISNCQHIMESFLSLFDPN QDDGFEEEPELNGNSSGGGSSSSDYETDANANECSVVSGMPTERGNLIFD FEQGMLPPEPQLGNVEYKLKLVNPSKQRFEHLVTQMKWRLREGNGEAIYE IGVSDAGYLQGLSDKDMNASLTTLKQMAHSLGASTSVLRRKTIAARRAVA EVLVRKIPDDQHNIEVRVAVLGGADAGKSTLLGVLTQDELDNGHGRARLN MFRHMHEIQSGRTSCISHETLGFDALGNVVNYKYNEMMTAEEISDRSSKL VTFMDLAGHRRYMRTTVQALSGYSPHYAMLVVSAGSGCNDTTEEHLAIVR ALDMPFFVLVTKTDITSPDATVQELCNLLTTIGCRKVPFVVTNTDEAISA GSNQISENIVPIFCVSNVTGTGLNLVTKFLYVLSPGISNAEKDRLEQESC EFQVDEIFRVSDVGPVVGGLLVQGVLTENMAMKIGPLPDGSFHPVTVNTI HRNKAPCRVVRAGQSASLSFSMDQDVPTLRSGMVLLGDIGNSLDEPYGTF FFQAKVSVLFHATAIYVGFQTTVHIGSIRQTAVIRGIMGGERLGTNDCAS VMFEFVGHPEYVRPGMRILFREGTSKGIGVVTQVFPVNKTGIK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18641-PA | 606 | GF18641-PA | 1..606 | 40..643 | 3069 | 94.7 | Plus |
Dana\GF12779-PA | 663 | GF12779-PA | 16..556 | 89..636 | 974 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10776-PA | 604 | GG10776-PA | 1..604 | 40..643 | 3166 | 98.2 | Plus |
Dere\GG20986-PA | 670 | GG20986-PA | 2..558 | 73..636 | 995 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18709-PA | 604 | GH18709-PA | 1..604 | 40..643 | 2798 | 88.3 | Plus |
Dgri\GH21766-PA | 671 | GH21766-PA | 53..559 | 121..636 | 996 | 41 | Plus |
Dgri\GH25222-PA | 615 | GH25222-PA | 53..503 | 121..636 | 800 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2017-PA | 643 | CG2017-PA | 1..643 | 1..643 | 3317 | 100 | Plus |
CG2017-PE | 604 | CG2017-PE | 1..604 | 40..643 | 3103 | 100 | Plus |
CG2017-PB | 604 | CG2017-PB | 1..604 | 40..643 | 3103 | 100 | Plus |
CG2017-PC | 604 | CG2017-PC | 1..604 | 40..643 | 3103 | 100 | Plus |
CG2017-PD | 604 | CG2017-PD | 1..604 | 40..643 | 3103 | 100 | Plus |
Dgp-1-PB | 669 | CG5729-PB | 9..556 | 82..636 | 976 | 40.5 | Plus |
Dgp-1-PA | 669 | CG5729-PA | 9..556 | 82..636 | 976 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22855-PA | 607 | GI22855-PA | 1..607 | 40..643 | 2838 | 88.6 | Plus |
Dmoj\GI19313-PA | 667 | GI19313-PA | 6..558 | 78..636 | 1024 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23496-PA | 603 | GL23496-PA | 1..603 | 40..643 | 2958 | 93.7 | Plus |
Dper\GL10449-PA | 665 | GL10449-PA | 31..560 | 87..636 | 997 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15187-PA | 603 | GA15187-PA | 1..603 | 40..643 | 2953 | 93.6 | Plus |
Dpse\GA19089-PA | 665 | GA19089-PA | 31..560 | 87..636 | 1000 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10584-PA | 604 | GM10584-PA | 1..604 | 40..643 | 3206 | 99.3 | Plus |
Dsec\GM19921-PA | 669 | GM19921-PA | 9..556 | 82..636 | 994 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19575-PA | 748 | GD19575-PA | 142..748 | 37..643 | 3243 | 99.8 | Plus |
Dsim\GD25410-PA | 544 | GD25410-PA | 9..530 | 82..627 | 913 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14157-PA | 618 | GJ14157-PA | 1..618 | 40..643 | 2808 | 86.8 | Plus |
Dvir\GJ22191-PA | 659 | GJ22191-PA | 28..558 | 87..636 | 997 | 40 | Plus |