BDGP Sequence Production Resources |
Search the DGRC for SD04017
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 40 |
Well: | 17 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1902-RA |
Protein status: | SD04017.pep: gold |
Preliminary Size: | 1738 |
Sequenced Size: | 1730 |
Gene | Date | Evidence |
---|---|---|
CG1902 | 2001-01-01 | Release 2 assignment |
CG1902 | 2001-10-10 | Blastp of sequenced clone |
CG1902 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1902 | 2008-04-29 | Release 5.5 accounting |
CG1902 | 2008-08-15 | Release 5.9 accounting |
CG30338 | 2008-08-15 | Release 5.9 accounting |
CG1902 | 2008-12-18 | 5.12 accounting |
CG30338 | 2008-12-18 | 5.12 accounting |
1730 bp (1730 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061588
> SD04017.complete CAAACCTCTGCTCTGCCGAAACTGCCCGACCGTAAAAAGTGCATTTAACC AAACCCAATCAGCGACCAATTGACAAGATTCCCTGTGACCATGGCCAAGA TACGATCGCTGGAGCCGGAGCTGGCAGAGGTGGCTCGAACGCAGCTCTGC GAGGATCCGTCCTCGACGGTTGCGAAGATCGAGGCGCTAAGGACCTGGAT CGACAAACAGATCTACCTGGAGGCGCGGACCGACGATCAGTTCTTGGTGG CCTTTCTGCGCTTCTGCCGCTGGGACGTAGAGGAGGCCAAGAAGAGGGTA CTCTTCTACTACACCTACAAATCAAAGGAAAGAGAACTGCTCAAGGGTCG CCAGGTGGACGATAAGCTGATAGAACTGGCTCGTTCAGGAATATTCGCCA CATTGCCCAAACCTATTGGCCCTGGTGGCCCCCGCATCCACTACACACGA ATGGGTCACATTGAACCTTCCAAGCACAGTGTCAGCGACATTTTCCGCTT CCACGCTTTTCGCGCTGAGATCGAGATCAACACGGACGACAACTGGAACA TAGCCGGCGTGGTGGAGATCATCGACTTCACCAAGATACCCTACTCTCTG CTACTGCAGTTCGATCCTGGCATGTTCAAGCGGATGAATGCATTCCTAGA GCATGGAATTCCAGCGAATTTAGTGGCCACGCACATTGTCAATGCATCCA GGGAGACGCAGTTTGTCCTTGGACTGGTTCGGAATGTCATGAAGCAAAAG GAGCTGTTGCACATTCACTCCACCGTCGCGTCTCTGCGAAAGGCAATTGG ATTGGAGTATTTACCCGTGGAAATGGGCGGCGATAATGGATCTTTGTCTG ATGCAATGACGCGCTACGAGACCCAGCTGCTAAGCTTTTCCCCGTACTTC ACGGAAGACGAGCGATATGGCGTGGATGAGAAATTGCGGGAAGCCAGTGA GAAGGATCAGGAAAGGGGTGCTCCGTTAGTAACCGACGTTCCGAACGACG GAACCTTCCGAATGATTAACTTCGATTGAGTCAATGATCGGGCAGTTAGT TGTATATTCTGATGCACATCCTATAGAACACCCATTTAACACACAGCCCG ATATATACACACTGGAATGTATAGACACTACAGCGCTAAAGCGATCTTTG GTCATAGCAGAACCTGATATTTTATAAATGAAACCATAAGGGAGGAACAT CGAAACTAAAAGCAAATTGAACAATATTATAGACGACAAGTGCACACTAA AACGAGATAAGAAGCAAATGGATCGCCATCAAATGGCACAAAAACCTCAC AAGTTTGTCGATTTTAATTTATTGCTGTCCTTATCCACGCACATACTTAT ACACATTCTAACGTCCGGTCGAACGATTCATTCTACCATGATCCCATAAT GCATTTTCATGATGAAATCTTCAACGTCTTCTACTTGCGTGCTAAGTTGT TGTTGGCTTTGATTTTATCGCATACTTTTATAAATACGGTACATGAGCAT ACATATATATTTTGGATAATTTTTCAGTTGGTTAAGTGTCGTTTTTACTA ATTTTTGATACTAGTTTACACATACATATACATGCATCTCTATATTTATG GATAATACATACATAGTTAAATGATTATATTTAAATGTGACAATGTACTG TAGACCCCATGTTGAGTGCGTTAATAAATTAAAGCGAATTTGTTTAAATG TCGGTATAACTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5492172..5493127 | 756..1711 | 4750 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 5491747..5492114 | 389..756 | 1840 | 100 | Plus |
chr2R | 21145070 | chr2R | 5491370..5491683 | 76..389 | 1570 | 100 | Plus |
chr2R | 21145070 | chr2R | 5481578..5481654 | 1..77 | 385 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 9604669..9605628 | 756..1715 | 4770 | 99.8 | Plus |
2R | 25286936 | 2R | 9604244..9604611 | 389..756 | 1840 | 100 | Plus |
2R | 25286936 | 2R | 9603867..9604180 | 76..389 | 1570 | 100 | Plus |
2R | 25286936 | 2R | 9594083..9594159 | 1..77 | 385 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9605868..9606827 | 756..1715 | 4770 | 99.7 | Plus |
2R | 25260384 | 2R | 9605443..9605810 | 389..756 | 1840 | 100 | Plus |
2R | 25260384 | 2R | 9605066..9605379 | 76..389 | 1570 | 100 | Plus |
2R | 25260384 | 2R | 9595282..9595358 | 1..77 | 385 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dhet\Uhu | 1658 | Dhet\Uhu DHUHUH3 1658bp AKA(S51651) Derived from X63028 (Rel. 36, Last updated, Version 7). | 1418..1525 | 1473..1583 | 134 | 63.2 | Plus |
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 756..875 | 1173..1299 | 114 | 58.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5481578..5481654 | 1..77 | 100 | -> | Plus |
chr2R | 5491372..5491683 | 78..389 | 100 | -> | Plus |
chr2R | 5491748..5492114 | 390..756 | 100 | -> | Plus |
chr2R | 5492173..5493127 | 757..1711 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1902-RC | 1..939 | 91..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1902-RC | 1..939 | 91..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1902-RA | 1..939 | 91..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1902-RC | 1..939 | 91..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1902-RA | 1..939 | 91..1029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1902-RA | 1..1711 | 1..1711 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1902-RA | 1..1711 | 1..1711 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1902-RA | 39..1749 | 1..1711 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1902-RA | 1..1711 | 1..1711 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1902-RA | 39..1749 | 1..1711 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9594083..9594159 | 1..77 | 100 | -> | Plus |
2R | 9603869..9604180 | 78..389 | 100 | -> | Plus |
2R | 9604245..9604611 | 390..756 | 100 | -> | Plus |
2R | 9604670..9605624 | 757..1711 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9594083..9594159 | 1..77 | 100 | -> | Plus |
2R | 9603869..9604180 | 78..389 | 100 | -> | Plus |
2R | 9604245..9604611 | 390..756 | 100 | -> | Plus |
2R | 9604670..9605624 | 757..1711 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9594083..9594159 | 1..77 | 100 | -> | Plus |
2R | 9603869..9604180 | 78..389 | 100 | -> | Plus |
2R | 9604245..9604611 | 390..756 | 100 | -> | Plus |
2R | 9604670..9605624 | 757..1711 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5481588..5481664 | 1..77 | 100 | -> | Plus |
arm_2R | 5491374..5491685 | 78..389 | 100 | -> | Plus |
arm_2R | 5491750..5492116 | 390..756 | 100 | -> | Plus |
arm_2R | 5492175..5493129 | 757..1711 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9605068..9605379 | 78..389 | 100 | -> | Plus |
2R | 9605444..9605810 | 390..756 | 100 | -> | Plus |
2R | 9605869..9606823 | 757..1711 | 99 | Plus | |
2R | 9595282..9595358 | 1..77 | 100 | -> | Plus |
Translation from 90 to 1028
> SD04017.hyp MAKIRSLEPELAEVARTQLCEDPSSTVAKIEALRTWIDKQIYLEARTDDQ FLVAFLRFCRWDVEEAKKRVLFYYTYKSKERELLKGRQVDDKLIELARSG IFATLPKPIGPGGPRIHYTRMGHIEPSKHSVSDIFRFHAFRAEIEINTDD NWNIAGVVEIIDFTKIPYSLLLQFDPGMFKRMNAFLEHGIPANLVATHIV NASRETQFVLGLVRNVMKQKELLHIHSTVASLRKAIGLEYLPVEMGGDNG SLSDAMTRYETQLLSFSPYFTEDERYGVDEKLREASEKDQERGAPLVTDV PNDGTFRMINFD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1902-PC | 312 | CG1902-PC | 1..312 | 1..312 | 1613 | 100 | Plus |
CG1902-PA | 312 | CG1902-PA | 1..312 | 1..312 | 1613 | 100 | Plus |
CG30339-PA | 308 | CG30339-PA | 1..308 | 1..312 | 564 | 38.6 | Plus |
CG12926-PA | 313 | CG12926-PA | 9..313 | 4..312 | 530 | 37.1 | Plus |
CG33966-PA | 310 | CG33966-PA | 1..310 | 1..312 | 491 | 34.8 | Plus |
Translation from 90 to 1028
> SD04017.pep MAKIRSLEPELAEVARTQLCEDPSSTVAKIEALRTWIDKQIYLEARTDDQ FLVAFLRFCRWDVEEAKKRVLFYYTYKSKERELLKGRQVDDKLIELARSG IFATLPKPIGPGGPRIHYTRMGHIEPSKHSVSDIFRFHAFRAEIEINTDD NWNIAGVVEIIDFTKIPYSLLLQFDPGMFKRMNAFLEHGIPANLVATHIV NASRETQFVLGLVRNVMKQKELLHIHSTVASLRKAIGLEYLPVEMGGDNG SLSDAMTRYETQLLSFSPYFTEDERYGVDEKLREASEKDQERGAPLVTDV PNDGTFRMINFD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12483-PA | 312 | GF12483-PA | 1..312 | 1..312 | 1293 | 77.6 | Plus |
Dana\GF12490-PA | 308 | GF12490-PA | 1..308 | 1..312 | 579 | 38.2 | Plus |
Dana\GF12489-PA | 311 | GF12489-PA | 7..311 | 4..312 | 523 | 35.5 | Plus |
Dana\GF24441-PA | 310 | GF24441-PA | 1..310 | 1..312 | 502 | 35.8 | Plus |
Dana\GF25066-PA | 311 | GF25066-PA | 4..311 | 3..312 | 447 | 33.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24093-PA | 312 | GG24093-PA | 1..312 | 1..312 | 1528 | 91 | Plus |
Dere\GG25272-PA | 308 | GG25272-PA | 1..308 | 1..312 | 562 | 38.9 | Plus |
Dere\GG25270-PA | 313 | GG25270-PA | 9..313 | 4..312 | 547 | 37.1 | Plus |
Dere\GG14766-PA | 324 | GG14766-PA | 15..324 | 1..312 | 479 | 33.5 | Plus |
Dere\GG15223-PA | 311 | GG15223-PA | 4..311 | 3..312 | 469 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22935-PA | 311 | GH22935-PA | 1..311 | 1..312 | 1263 | 75.5 | Plus |
Dgri\GH22857-PA | 310 | GH22857-PA | 6..310 | 4..312 | 540 | 37.1 | Plus |
Dgri\GH22856-PA | 316 | GH22856-PA | 12..316 | 4..312 | 503 | 33.4 | Plus |
Dgri\GH15439-PA | 324 | GH15439-PA | 15..324 | 1..312 | 481 | 35.4 | Plus |
Dgri\GH15199-PA | 308 | GH15199-PA | 4..308 | 3..312 | 464 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1902-PC | 312 | CG1902-PC | 1..312 | 1..312 | 1613 | 100 | Plus |
CG1902-PA | 312 | CG1902-PA | 1..312 | 1..312 | 1613 | 100 | Plus |
CG30339-PA | 308 | CG30339-PA | 1..308 | 1..312 | 564 | 38.6 | Plus |
CG12926-PA | 313 | CG12926-PA | 9..313 | 4..312 | 530 | 37.1 | Plus |
CG33966-PA | 310 | CG33966-PA | 1..310 | 1..312 | 491 | 34.8 | Plus |
CG33514-PA | 311 | CG33514-PA | 4..311 | 3..312 | 463 | 35 | Plus |
CG31636-PB | 313 | CG31636-PB | 1..295 | 1..293 | 418 | 32 | Plus |
CG31636-PA | 313 | CG31636-PA | 1..295 | 1..293 | 418 | 32 | Plus |
CG10300-PA | 311 | CG10300-PA | 5..286 | 4..283 | 412 | 30.5 | Plus |
CG10301-PB | 306 | CG10301-PB | 3..306 | 5..312 | 394 | 31.4 | Plus |
CG33965-PA | 317 | CG33965-PA | 9..317 | 4..312 | 359 | 29.1 | Plus |
CG2663-PC | 308 | CG2663-PC | 22..308 | 21..312 | 279 | 24.7 | Plus |
CG2663-PA | 308 | CG2663-PA | 22..308 | 21..312 | 279 | 24.7 | Plus |
Cralbp-PA | 324 | CG10546-PA | 11..324 | 7..312 | 191 | 23.9 | Plus |
CG5958-PA | 294 | CG5958-PA | 18..260 | 7..247 | 188 | 24.9 | Plus |
pinta-PB | 273 | CG13848-PB | 18..268 | 22..276 | 180 | 23.1 | Plus |
pinta-PA | 273 | CG13848-PA | 18..268 | 22..276 | 180 | 23.1 | Plus |
CG10026-PD | 290 | CG10026-PD | 7..255 | 3..247 | 173 | 28.9 | Plus |
CG10026-PC | 290 | CG10026-PC | 7..255 | 3..247 | 173 | 28.9 | Plus |
CG10026-PA | 290 | CG10026-PA | 7..255 | 3..247 | 173 | 28.9 | Plus |
CG10026-PB | 299 | CG10026-PB | 16..264 | 3..247 | 173 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18421-PA | 311 | GI18421-PA | 1..311 | 1..312 | 1288 | 77.6 | Plus |
Dmoj\GI21234-PA | 308 | GI21234-PA | 1..308 | 1..312 | 597 | 39.2 | Plus |
Dmoj\GI21233-PA | 313 | GI21233-PA | 9..313 | 4..312 | 507 | 34.2 | Plus |
Dmoj\GI16717-PA | 308 | GI16717-PA | 4..308 | 3..312 | 489 | 35.6 | Plus |
Dmoj\GI22784-PA | 306 | GI22784-PA | 3..306 | 5..312 | 403 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17150-PA | 312 | GL17150-PA | 1..312 | 1..312 | 1355 | 80.4 | Plus |
Dper\GL17331-PA | 308 | GL17331-PA | 1..308 | 1..312 | 578 | 37.3 | Plus |
Dper\GL17330-PA | 311 | GL17330-PA | 7..311 | 4..312 | 532 | 36 | Plus |
Dper\GL16163-PA | 311 | GL16163-PA | 5..311 | 4..312 | 462 | 33.2 | Plus |
Dper\GL13658-PA | 311 | GL13658-PA | 3..286 | 2..283 | 417 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15120-PA | 312 | GA15120-PA | 1..312 | 1..312 | 1355 | 80.4 | Plus |
Dpse\GA15770-PA | 308 | GA15770-PA | 1..308 | 1..312 | 585 | 37.9 | Plus |
Dpse\GA11913-PA | 311 | GA11913-PA | 7..311 | 4..312 | 527 | 35.7 | Plus |
Dpse\GA28411-PA | 311 | GA28411-PA | 5..311 | 4..312 | 462 | 33.2 | Plus |
Dpse\GA10229-PA | 311 | GA10229-PA | 3..286 | 2..283 | 423 | 31.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21141-PA | 312 | GM21141-PA | 1..312 | 1..312 | 1639 | 97.8 | Plus |
Dsec\GM20589-PA | 308 | GM20589-PA | 1..308 | 1..312 | 589 | 39.6 | Plus |
Dsec\GM20588-PA | 313 | GM20588-PA | 9..313 | 4..312 | 546 | 37.1 | Plus |
Dsec\GM14655-PA | 311 | GM14655-PA | 4..311 | 3..312 | 465 | 35.4 | Plus |
Dsec\GM14386-PA | 290 | GM14386-PA | 1..290 | 1..312 | 453 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10670-PA | 312 | GD10670-PA | 1..312 | 1..312 | 1623 | 97.1 | Plus |
Dsim\GD10061-PA | 308 | GD10061-PA | 1..308 | 1..312 | 575 | 38.6 | Plus |
Dsim\GD13840-PA | 311 | GD13840-PA | 4..311 | 3..312 | 466 | 35.4 | Plus |
Dsim\GD22558-PA | 313 | GD22558-PA | 1..313 | 1..312 | 415 | 30.7 | Plus |
Dsim\GD21031-PA | 306 | GD21031-PA | 3..306 | 5..312 | 400 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21508-PA | 311 | GJ21508-PA | 1..311 | 1..312 | 1280 | 76.9 | Plus |
Dvir\GJ20839-PA | 312 | GJ20839-PA | 8..312 | 4..312 | 546 | 37 | Plus |
Dvir\GJ12135-PA | 310 | GJ12135-PA | 1..310 | 1..312 | 504 | 36.4 | Plus |
Dvir\GJ20838-PA | 316 | GJ20838-PA | 12..316 | 4..312 | 477 | 34.2 | Plus |
Dvir\GJ12461-PA | 308 | GJ12461-PA | 4..308 | 3..312 | 475 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15952-PA | 313 | GK15952-PA | 1..313 | 1..312 | 1338 | 79.6 | Plus |
Dwil\GK15623-PA | 309 | GK15623-PA | 4..309 | 3..312 | 594 | 38.5 | Plus |
Dwil\GK15622-PA | 313 | GK15622-PA | 9..313 | 4..312 | 518 | 35.5 | Plus |
Dwil\GK21135-PA | 310 | GK21135-PA | 1..310 | 1..312 | 483 | 34.6 | Plus |
Dwil\GK11682-PA | 311 | GK11682-PA | 3..311 | 2..312 | 437 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19293-PA | 312 | GE19293-PA | 1..312 | 1..312 | 1516 | 90.1 | Plus |
Dyak\GE22159-PA | 308 | GE22159-PA | 1..308 | 1..312 | 570 | 38.5 | Plus |
Dyak\GE22148-PA | 313 | GE22148-PA | 9..313 | 4..312 | 549 | 37.4 | Plus |
Dyak\GE21129-PA | 310 | GE21129-PA | 1..310 | 1..312 | 482 | 33.5 | Plus |
Dyak\GE21443-PA | 311 | GE21443-PA | 4..311 | 3..312 | 471 | 35.7 | Plus |