BDGP Sequence Production Resources |
Search the DGRC for SD04019
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 40 |
Well: | 19 |
Vector: | pOT2 |
Associated Gene/Transcript | CG17278-RA |
Protein status: | SD04019.pep: gold |
Preliminary Size: | 2084 |
Sequenced Size: | 1954 |
Gene | Date | Evidence |
---|---|---|
CG17278 | 2001-01-01 | Release 2 assignment |
CG17278 | 2001-07-04 | Blastp of sequenced clone |
CG17278 | 2003-01-01 | Sim4 clustering to Release 3 |
CG17278 | 2008-04-29 | Release 5.5 accounting |
CG17278 | 2008-08-15 | Release 5.9 accounting |
CG17278 | 2008-12-18 | 5.12 accounting |
1954 bp (1954 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060461
> SD04019.complete AATTGACAGCGGTCAGCGATGAGGAGCAAACTTTTTAGTGACTGCATAAA TACATGAATAATTCAAACTCAAAAAACCCAGCAGCAACAACAAGCTGGTC CACGACAACGTGACCTGCCTGTAGAGTTATCGATCAAACGACCGGCCCGA CCGATCCATCGATCCACCGTTCTACCGATCTACCGATCCGATTTCGGAGC CCTGCCCCGCTTCATCTGGTGTATTCCGGCCCAACTAACAGCAGCCACAT CCATCCATCCCAATACCAAATACAAAATACAAAATACAAAATACCCAATA ACCAATACCCAATACCAGAGGAAAAAACACAATAAAACAATCTGAAATCA GAAATCAACTACAGGCGAAATGTGCGGAGAAACAAAAAGAAAATTAAAGA CGACGACACGAGCGTAAATCTTTTTAGCATGAAAAAATTCTATAAAACTA ACAGGCACTGTGTGGTCGGACATCATTCGTGCGCTACGACGGCAGACGAC AGCCGCAGATACAGATACAGATACGGATACCGAGATACAGATTCAGATAC CAAATACCGAGATACAGATAGCCGGTCGGACGGACAGGGCCTGATTGATT GATTGCCGAACCCGGCCCCATCTCCTGCCCAAAAAATCCAAAATCAAAGC CCAAAACCAAACCCAAACCAGACTCAAAATCTGTCTGCATCAAAGTATCT GCAACAGCAACAGCACAGTCATCCCAGCATCCAACCAACATCTAACAGCG GTCAGCATCCGAGCATCCCAGCATACCAATACCAATCCGATACGAATCCC AGTCCCAGCGGACATCGTCCAGCCGCCAAGCCATCAATCAGTCAACCGAG TCACCGCGTCAGTTAGTCAATCGAATCGACTAGCCAGCCCACTCGACTTT TGCTTTTGCTGGCTGGAGGATATCTTCGGTCGGCGCTTTAGTTTCAGTTC GCATTTGGACGCGTGCTGTGCGGCCTCGCCGATAGAGAGATTCGGATCGG AACGGAATCGGAATTCTGAATTCTCAGTACTCAGCTCTCAGTACTCAGTG TTAAGTTCTCAGTTCTCAGTTCTCAGTACTCAGTACTCAGTTCTTAATTC TCAATTCTCAGTTACGAGCTCTACATTCTGAATCAGAATTAGAATTAGAA TCAGAAACGAAAAAGAATCGTGCGCGAATTAATCTACAACGTATCGAGAA CCAAAACACTGCCGCACACACGTGTCTGAAGTTCAGTGACAAGCCCCAAA TCAGGCGTCTATATTCCATTGAATATATATAAATCGTGAAATCGTAAAAC AATTTTAATCAGCTAGAAACCAAGCGCAGGCACGGCATAATTAATTCGTC TGACCCGCAAAGTTCTTGCAAAGTAAATACGATTGTGCAAAGTGTTGGCC ATCGCATCGATAAAGTGAAAACTACTCCTACAGCCAATCCGAAAACTAAA CCAACTAGTAACAACATGAAGCTCTCAGCAGTATTGTTGGCCATCGCGCT GCTTGCCCTCTCGCTGGTCCAGTGCCTCGGCCTGCCCGATCCCAGCACCA AGTGCGTCATGGAGTGCGACACGCAGGAGTACCGATCCATTTGCGCTGCG GACGACAAGGGCTCCACCAAGACCTATCGCAATCTGTGCGTGATGAAGAC GGAAAATTGTCTCCAGAATGCAAACTTTCAAAAGATCAGCGACAAGGAGT GTCCGTAGAGCTATGGATCCATTGATCTGTAGTCCAGCGGAAATAACTTA ATCATGGAGGGGAGCGAGTTGACGCGGTTTGGCATTCCGGAGGACTCATC TTTCCCCCGTGGTATTTGTGTGTGATATTTTTAAGTTGTACTTCAGCGGA ATACAGAAAACACGCCCCGAACGTAATGCATAATGATAATGTATTCTAAA ATTATTAATAATAAATATTAAATAAAGTAATCGTAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17278-RA | 2092 | CG17278-RA | 84..2019 | 1..1936 | 9620 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 16846535..16848020 | 1493..1 | 7220 | 99.1 | Minus |
chr3R | 27901430 | chr3R | 16844904..16845164 | 1934..1674 | 1305 | 100 | Minus |
chr3R | 27901430 | chr3R | 16845266..16845445 | 1673..1494 | 900 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 21022671..21024163 | 1493..1 | 7435 | 99.9 | Minus |
3R | 32079331 | 3R | 21021042..21021304 | 1936..1674 | 1300 | 99.6 | Minus |
3R | 32079331 | 3R | 21021405..21021584 | 1673..1494 | 885 | 99.4 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 20763502..20764994 | 1493..1 | 7435 | 99.8 | Minus |
3R | 31820162 | 3R | 20761873..20762135 | 1936..1674 | 1300 | 99.6 | Minus |
3R | 31820162 | 3R | 20762236..20762415 | 1673..1494 | 885 | 99.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 16844942..16845164 | 1674..1896 | 100 | <- | Minus |
chr3R | 16845266..16845445 | 1494..1673 | 100 | <- | Minus |
chr3R | 16846535..16846914 | 1114..1493 | 99 | == | Minus |
chr3R | 16847001..16847450 | 571..1020 | 99 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17278-RA | 1..243 | 1466..1708 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17278-RA | 1..243 | 1466..1708 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17278-RA | 1..243 | 1466..1708 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17278-RA | 1..243 | 1466..1708 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17278-RA | 1..243 | 1466..1708 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17278-RA | 1..1934 | 1..1934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17278-RA | 1..1934 | 1..1934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17278-RA | 1..1934 | 1..1934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17278-RA | 1..1934 | 1..1934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG17278-RA | 1..1934 | 1..1934 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21021044..21021304 | 1674..1934 | 99 | <- | Minus |
3R | 21021405..21021584 | 1494..1673 | 99 | <- | Minus |
3R | 21022671..21024163 | 1..1493 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21021044..21021304 | 1674..1934 | 99 | <- | Minus |
3R | 21021405..21021584 | 1494..1673 | 99 | <- | Minus |
3R | 21022671..21024163 | 1..1493 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 21021044..21021304 | 1674..1934 | 99 | <- | Minus |
3R | 21021405..21021584 | 1494..1673 | 99 | <- | Minus |
3R | 21022671..21024163 | 1..1493 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 16846766..16847026 | 1674..1934 | 99 | <- | Minus |
arm_3R | 16847127..16847306 | 1494..1673 | 99 | <- | Minus |
arm_3R | 16848393..16849885 | 1..1493 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20761875..20762135 | 1674..1934 | 99 | <- | Minus |
3R | 20762236..20762415 | 1494..1673 | 99 | <- | Minus |
3R | 20763502..20764994 | 1..1493 | 99 | Minus |
Translation from 1465 to 1707
> SD04019.pep MKLSAVLLAIALLALSLVQCLGLPDPSTKCVMECDTQEYRSICAADDKGS TKTYRNLCVMKTENCLQNANFQKISDKECP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18528-PA | 80 | GF18528-PA | 1..80 | 1..80 | 294 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15015-PA | 80 | GG15015-PA | 1..80 | 1..80 | 409 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23214-PA | 80 | GH23214-PA | 1..80 | 1..80 | 309 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17278-PA | 80 | CG17278-PA | 1..80 | 1..80 | 419 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10312-PA | 80 | GI10312-PA | 1..80 | 1..80 | 302 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12691-PA | 80 | GL12691-PA | 1..80 | 1..80 | 340 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14434-PA | 80 | GA14434-PA | 1..80 | 1..80 | 340 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15117-PA | 80 | GM15117-PA | 1..80 | 1..80 | 398 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20020-PA | 80 | GD20020-PA | 1..80 | 1..80 | 406 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10165-PA | 80 | GJ10165-PA | 1..80 | 1..80 | 310 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14319-PA | 81 | GK14319-PA | 1..81 | 1..80 | 321 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25025-PA | 80 | GE25025-PA | 1..80 | 1..80 | 410 | 98.8 | Plus |
Translation from 1465 to 1707
> SD04019.hyp MKLSAVLLAIALLALSLVQCLGLPDPSTKCVMECDTQEYRSICAADDKGS TKTYRNLCVMKTENCLQNANFQKISDKECP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG17278-PA | 80 | CG17278-PA | 1..80 | 1..80 | 419 | 100 | Plus |