BDGP Sequence Production Resources |
Search the DGRC for SD04652
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 46 |
Well: | 52 |
Vector: | pOT2 |
Associated Gene/Transcript | Tfb1-RA |
Protein status: | SD04652.pep: gold |
Preliminary Size: | 2138 |
Sequenced Size: | 2021 |
Gene | Date | Evidence |
---|---|---|
CG8151 | 2001-01-01 | Release 2 assignment |
CG8151 | 2001-07-04 | Blastp of sequenced clone |
Tfb1 | 2008-04-29 | Release 5.5 accounting |
Tfb1 | 2008-08-15 | Release 5.9 accounting |
Tfb1 | 2008-12-18 | 5.12 accounting |
2021 bp (2021 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052097
> SD04652.complete CTGACTGAGGTTGCAGGAATCTTCTGGCGTCCCCCTTCTCGTCCTTTCGA AGGCTCTCATGTGAGACGGCGAGCGTGGATCTGCGACTGGGACTTCGACT GCTGAGCGCCGGGCGTAGAACAAGATGACCACCAGCAGTGAGGACGTGCT GCTCCAGATGGGCGAGGTGCGGTACAAGAAGGGCGACGGCACGCTCTACG TAATGAATGAGCGTGTGGCCTGGATGGCGGAACACCGGGACACGGTAACA GTCTCCCATCGTTATGCGGATATCAAGACTCAAAAGATATCTCCTGAGGG CAAGCCCAAGGTGCAGCTGCAAGTGGTTCTTCACGACGGCAACACATCGA CCTTCCACTTCGTCAACCGCCAGGGACAGGCCGCAATGCTTGCCGACAGG GACAAGGTCAAGGAGCTATTGCAGCAACTGCTTCCTAACTTCAAGCGGAA GGTGGACAAAGACCTGGAAGACAAGAACCGCATCCTTGTTGAGAATCCCA ACCTGCTGCAACTCTACAAGGACCTTGTCATAACCAAAGTCCTAACCAGC GATGAGTTCTGGGCTACGCATGCCAAGGATCACGCCCTTAAGAAAATGGG CAGATCCCAGGAGATCGGTGTTTCTGGCGCCTTTCTGGCCGACATAAAGC CGCAGACAGACGGCTGTAATGGCCTCAAGTACAACCTCACCTCTGATGTG ATTCACTGCATTTTCAAGACCTATCCCGCCGTTAAACGCAAACATTTTGA GAATGTGCCTGCCAAAATGTCCGAGGCCGAGTTTTGGACCAAGTTTTTCC AATCACACTACTTTCATCGTGACAGACTGACAGCCGGCACAAAGGACATA TTCACGGAGTGCGGCAAGATCGATGACCAAGCATTAAAAGCGGCTGTTCA GCAGGGAGCTGGTGATCCTTTGCTAGACCTTAAAAAGTTTGAGGATGTTC CTTTAGAAGAGGGCTTTGGCAGCGTAGCAGGGGACCGCAACGTCGTGAAC AGCGGGAATATTGTGCACCAAAACATGATCAAGCGATTCAATCAGCATTC CATCATGGTGCTTAAGACCTGTGCTAACGTGACCTCAGCGCCGTCAACTA TGACCAATGGTACCAATAATGCCAACGGGCCTGTTTCCCAATCCGCGTAT ACGAACGGGATGAATGGAAAGGGCCAGGCCACGGCCACCGCGACGAAGAG TTCCTCCGATCAGGTGGACAAAGACGAGCCGCAGAGCAAAAAGCAACGAC TGATGGAAAAGATTCACTATGTGGATCTCGGGGACCCTATATTGGAGGGA GATGATTCCGCCAACGGCGAGAAAGCCAAGTCTAAGCACTTCGAACTGTC CAAAGTGGAGCGTTACCTCAATGGCCCTGTCCAGAACAGCATGTACGACA ACCACAACGATCCAATGAGTCTTGAAGAGGTGCAGTACAAGCTGGTGCGG AATTCGGAGTCATGGCTAAACCGCAACGTGCAACGAACGTTCATCTGTTC TAAGGCGGCAGTAAATGCTCTGGGTGAACTAAGTCCTGGCGGTTCCATGA TGCGCGGTTTCCAAGAGCAGTCAGCGGGACAACTTGTTCCGAACGACTTC CAACGAGAGCTGCGCCACTTATACCTTTCGCTGTCCGAGCTGCTGAAACA CTTTTGGAGCTGCTTTCCGCCCACCTCAGAAGAGCTGGAGACAAAGTTAC AGCGTATGCACGAGACGTTGCAGCGCTTCAAAATGGCCAAACTAGTGCCT TTTGAGAACCGCGCTATGCACGAACTTTCGCCACTGCGATCCTCGCTGAC GCAGCACTTGAATCAGCTGCTGCGCACCGCCAACAGCAAGTTCGCAACTT GGAAGGAGCGAAAACTGCGCAACACCAGGTAGCAAACGCTCAACGGAGGC GAGCTCGAGCATCTGCCACACACCTCAAGAACCATTATTATAGACTAGGC TTAACTATAAGAGTATGCGGAACGCATTGGAATAAAACATTATTTGCAAC TTGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10251276..10252239 | 617..1580 | 4820 | 100 | Plus |
chr2R | 21145070 | chr2R | 10250880..10251220 | 279..619 | 1705 | 100 | Plus |
chr2R | 21145070 | chr2R | 10250547..10250817 | 8..278 | 1355 | 100 | Plus |
chr2R | 21145070 | chr2R | 10252525..10252777 | 1751..2003 | 1250 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 10252300..10252475 | 1581..1756 | 880 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14363972..14364935 | 617..1580 | 4790 | 99.8 | Plus |
2R | 25286936 | 2R | 14363576..14363916 | 279..619 | 1690 | 99.7 | Plus |
2R | 25286936 | 2R | 14363243..14363513 | 8..278 | 1355 | 100 | Plus |
2R | 25286936 | 2R | 14365221..14365473 | 1751..2003 | 1250 | 99.6 | Plus |
2R | 25286936 | 2R | 14364996..14365171 | 1581..1756 | 880 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14365171..14366134 | 617..1580 | 4790 | 99.7 | Plus |
2R | 25260384 | 2R | 14364775..14365115 | 279..619 | 1690 | 99.7 | Plus |
2R | 25260384 | 2R | 14364442..14364712 | 8..278 | 1355 | 100 | Plus |
2R | 25260384 | 2R | 14366420..14366672 | 1751..2003 | 1250 | 99.6 | Plus |
2R | 25260384 | 2R | 14366195..14366370 | 1581..1756 | 880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10250540..10250817 | 1..278 | 98 | -> | Plus |
chr2R | 10250880..10251218 | 279..617 | 100 | -> | Plus |
chr2R | 10251277..10252239 | 618..1580 | 100 | -> | Plus |
chr2R | 10252300..10252475 | 1581..1756 | 100 | -> | Plus |
chr2R | 10252531..10252777 | 1757..2003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb1-RA | 1..1758 | 125..1882 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb1-RA | 1..1758 | 125..1882 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb1-RC | 1..1758 | 125..1882 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb1-RA | 1..1758 | 125..1882 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb1-RC | 1..1758 | 125..1882 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb1-RB | 20..2022 | 1..2003 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb1-RB | 20..2022 | 1..2003 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb1-RB | 23..2025 | 1..2003 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb1-RB | 20..2022 | 1..2003 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb1-RB | 23..2025 | 1..2003 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14363236..14363513 | 1..278 | 98 | -> | Plus |
2R | 14363576..14363914 | 279..617 | 99 | -> | Plus |
2R | 14363973..14364935 | 618..1580 | 99 | -> | Plus |
2R | 14364996..14365171 | 1581..1756 | 100 | -> | Plus |
2R | 14365227..14365473 | 1757..2003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14363236..14363513 | 1..278 | 98 | -> | Plus |
2R | 14363576..14363914 | 279..617 | 99 | -> | Plus |
2R | 14363973..14364935 | 618..1580 | 99 | -> | Plus |
2R | 14364996..14365171 | 1581..1756 | 100 | -> | Plus |
2R | 14365227..14365473 | 1757..2003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14363236..14363513 | 1..278 | 98 | -> | Plus |
2R | 14363576..14363914 | 279..617 | 99 | -> | Plus |
2R | 14363973..14364935 | 618..1580 | 99 | -> | Plus |
2R | 14364996..14365171 | 1581..1756 | 100 | -> | Plus |
2R | 14365227..14365473 | 1757..2003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10250741..10251018 | 1..278 | 98 | -> | Plus |
arm_2R | 10251081..10251419 | 279..617 | 99 | -> | Plus |
arm_2R | 10251478..10252440 | 618..1580 | 99 | -> | Plus |
arm_2R | 10252501..10252676 | 1581..1756 | 100 | -> | Plus |
arm_2R | 10252732..10252978 | 1757..2003 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14364775..14365113 | 279..617 | 99 | -> | Plus |
2R | 14364435..14364712 | 1..278 | 98 | -> | Plus |
2R | 14365172..14366134 | 618..1580 | 99 | -> | Plus |
2R | 14366195..14366370 | 1581..1756 | 100 | -> | Plus |
2R | 14366426..14366672 | 1757..2003 | 100 | Plus |
Translation from 124 to 1881
> SD04652.pep MTTSSEDVLLQMGEVRYKKGDGTLYVMNERVAWMAEHRDTVTVSHRYADI KTQKISPEGKPKVQLQVVLHDGNTSTFHFVNRQGQAAMLADRDKVKELLQ QLLPNFKRKVDKDLEDKNRILVENPNLLQLYKDLVITKVLTSDEFWATHA KDHALKKMGRSQEIGVSGAFLADIKPQTDGCNGLKYNLTSDVIHCIFKTY PAVKRKHFENVPAKMSEAEFWTKFFQSHYFHRDRLTAGTKDIFTECGKID DQALKAAVQQGAGDPLLDLKKFEDVPLEEGFGSVAGDRNVVNSGNIVHQN MIKRFNQHSIMVLKTCANVTSAPSTMTNGTNNANGPVSQSAYTNGMNGKG QATATATKSSSDQVDKDEPQSKKQRLMEKIHYVDLGDPILEGDDSANGEK AKSKHFELSKVERYLNGPVQNSMYDNHNDPMSLEEVQYKLVRNSESWLNR NVQRTFICSKAAVNALGELSPGGSMMRGFQEQSAGQLVPNDFQRELRHLY LSLSELLKHFWSCFPPTSEELETKLQRMHETLQRFKMAKLVPFENRAMHE LSPLRSSLTQHLNQLLRTANSKFATWKERKLRNTR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13498-PA | 587 | GF13498-PA | 1..587 | 1..585 | 2829 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20446-PA | 586 | GG20446-PA | 1..586 | 1..585 | 3110 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19743-PA | 581 | GH19743-PA | 1..581 | 1..585 | 2750 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tfb1-PD | 585 | CG8151-PD | 1..585 | 1..585 | 3052 | 100 | Plus |
Tfb1-PA | 585 | CG8151-PA | 1..585 | 1..585 | 3052 | 100 | Plus |
Tfb1-PC | 585 | CG8151-PC | 1..585 | 1..585 | 3052 | 100 | Plus |
Tfb1-PB | 585 | CG8151-PB | 1..585 | 1..585 | 3052 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20277-PA | 583 | GI20277-PA | 1..583 | 1..585 | 2752 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10686-PA | 587 | GL10686-PA | 1..587 | 1..585 | 2804 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20852-PA | 587 | GA20852-PA | 1..587 | 1..585 | 2804 | 88.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21534-PA | 584 | GM21534-PA | 1..584 | 1..585 | 3089 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11042-PA | 584 | GD11042-PA | 1..584 | 1..585 | 3104 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22005-PA | 581 | GJ22005-PA | 1..581 | 1..585 | 2738 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21470-PA | 585 | GK21470-PA | 1..585 | 1..585 | 2533 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13578-PA | 586 | GE13578-PA | 1..586 | 1..585 | 3124 | 98.1 | Plus |
Translation from 124 to 1881
> SD04652.hyp MTTSSEDVLLQMGEVRYKKGDGTLYVMNERVAWMAEHRDTVTVSHRYADI KTQKISPEGKPKVQLQVVLHDGNTSTFHFVNRQGQAAMLADRDKVKELLQ QLLPNFKRKVDKDLEDKNRILVENPNLLQLYKDLVITKVLTSDEFWATHA KDHALKKMGRSQEIGVSGAFLADIKPQTDGCNGLKYNLTSDVIHCIFKTY PAVKRKHFENVPAKMSEAEFWTKFFQSHYFHRDRLTAGTKDIFTECGKID DQALKAAVQQGAGDPLLDLKKFEDVPLEEGFGSVAGDRNVVNSGNIVHQN MIKRFNQHSIMVLKTCANVTSAPSTMTNGTNNANGPVSQSAYTNGMNGKG QATATATKSSSDQVDKDEPQSKKQRLMEKIHYVDLGDPILEGDDSANGEK AKSKHFELSKVERYLNGPVQNSMYDNHNDPMSLEEVQYKLVRNSESWLNR NVQRTFICSKAAVNALGELSPGGSMMRGFQEQSAGQLVPNDFQRELRHLY LSLSELLKHFWSCFPPTSEELETKLQRMHETLQRFKMAKLVPFENRAMHE LSPLRSSLTQHLNQLLRTANSKFATWKERKLRNTR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tfb1-PD | 585 | CG8151-PD | 1..585 | 1..585 | 3052 | 100 | Plus |
Tfb1-PA | 585 | CG8151-PA | 1..585 | 1..585 | 3052 | 100 | Plus |
Tfb1-PC | 585 | CG8151-PC | 1..585 | 1..585 | 3052 | 100 | Plus |
Tfb1-PB | 585 | CG8151-PB | 1..585 | 1..585 | 3052 | 100 | Plus |