BDGP Sequence Production Resources |
Search the DGRC for SD04693
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 46 |
Well: | 93 |
Vector: | pOT2 |
Associated Gene/Transcript | Swip-1-RA |
Protein status: | SD04693.pep: gold |
Preliminary Size: | 1702 |
Sequenced Size: | 1634 |
Gene | Date | Evidence |
---|---|---|
CG10641 | 2001-01-01 | Release 2 assignment |
CG10641 | 2002-03-20 | Blastp of sequenced clone |
CG10641 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10641 | 2008-04-29 | Release 5.5 accounting |
CG10641 | 2008-08-15 | Release 5.9 accounting |
CG10641 | 2008-12-18 | 5.12 accounting |
1634 bp (1634 high quality bases) assembled on 2002-03-20
GenBank Submission: AY094963
> SD04693.complete AAGATTCGGAAGTCGCGGCGGTCGAAGCGGAACACCAGTTGTCCAATAAG AAAGTCAACTTGCAGCTAAAAAAAAAAGACCGGCAATTCAAACGCACCTT GCAACTGTTTTTTTCAAAGCCAAAAAAGGACTCAGGGCCACTCCCCACGA CAAAAGCTTACGTGCAACGAGTCCGTGTGTGTTTTCCTGGCGCATCGCCG CATTTGTGTGTGTATCCGGACATCTCTTTTACGGTCCTTTTTGCGTGGGT GTGCCAAAAGGAAGAGAGAGTGAGAAGGCAGCAGAAAAGGGCAGAAAGGG AAATTCCAGCACACTAAAAAGCGAGTCAACAAGGAGCGACACAATGTCCG TTTCCTCGAACGCCTCATCCGCCTCCAACAAGGACAGCGTGGACAGCCCC AGCAGCACCACCAACACGGACAGCTCCGAGCTGACGCACATCCTCAATCG GCGCCAGGAGATCATGGAGTCCCAGGAGGCGGGCATCGAGGTGCGTCGCA CCTACAAAGTGGTCAACGTCTACACCGACTTCCCCGAGTTCTCCCGTAAC CAGATCAAGGACTACCAGAAGACCTTCAATACATACGATACGGCTCGTGA TGGCTTCTTGGACCTGCAGGAGCTGAAGTTCATGATGGAGAAGCTGGGCG CTCCGCAAACCCATCTGGGACTCAAGCAGATGATTGCCGAGGTGGACGAG GATAACGATGGCAAGATTTCATTCCGAGAGTTCTTGCTGATCTTCAGGAA GGCCCAGGCCGGGGAACTGGACTCCGATTCTGGGCTGAATCAGCTGGCCC GCCTCACGGAGGTCGATGTGGAGCAGGTGGGAGTGAGCGGAGCCAAGAAC TTCTTCGAGGCGAAAATTGAGCAACAGCTGCGGACGAACAAGTTCCACGA CGAGATTCGGGCGGAGCAGGAGGAGCGCCGGCGAGAGGAGGAGGAGCGGG CCCAGCGGCGTCAGCAGTTCCAGCAGCGGGCAGCGATCTTCCAGTAGAGG ACTTAGGTTCGCCCTTAGTCTAGCGAGTAATTATCTGGCGTAGGTTAATC GAATGTGGAACTAATCCCGGGAGAAGAGGATACGCTTCGTACAAGCATTT TTCAAGCATCACATACTCTAATTATATTCATACTTATCGCCCCATACATA TAAAAACTCGATTTGCTGGCAAAAACATCTTGGGAATTGAATGTTATCTT TGACTAATGTTTGTTTTGGATCTTTGAAGTACCCATCACAACTTATCAAG TAACAAAATATAACGTTCAATTTCTAATATATATTTTTTTAAAACCAACC AAACTGAGCCACTCTAGCCAGGGACATATGCATACATACGTACATTAATA ACGATCATACCAAAAGCGTATTTATAGTTAACCTTTAGTTAAGTTTAAAA TGTTTTAGATTAAGAACTACTTTATTGTTTGGTGTTGCGCAAAATTTCAT TGTTGAATTACGTTTATCCTTGAGGGTTCTCCAAAATGTATGCTTTTTAC TTTATGATTTTGTACTTTTAGTGCCATTTTTATGTTCTTCGTTTTAGTTT TGTTAAAAATAAAATTGATAGTTATATTAAGCAAATAAACTTGTGAAATT CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 6023..6331 | 1580..1272 | 134 | 55.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18976440..18977458 | 583..1601 | 100 | <- | Minus |
chr2L | 18985365..18985947 | 1..582 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10641-RA | 1..654 | 344..997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10641-RA | 1..654 | 344..997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Swip-1-RA | 1..654 | 344..997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10641-RA | 1..654 | 344..997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Swip-1-RA | 1..654 | 344..997 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10641-RA | 21..1624 | 1..1601 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10641-RA | 21..1624 | 1..1601 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Swip-1-RA | 25..1628 | 1..1601 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10641-RA | 21..1624 | 1..1601 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Swip-1-RA | 25..1628 | 1..1601 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18977751..18978769 | 583..1601 | 100 | <- | Minus |
2L | 18986672..18987256 | 1..582 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18977751..18978769 | 583..1601 | 100 | <- | Minus |
2L | 18986672..18987256 | 1..582 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18977751..18978769 | 583..1601 | 100 | <- | Minus |
2L | 18986672..18987256 | 1..582 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18977751..18978769 | 583..1601 | 100 | <- | Minus |
arm_2L | 18986672..18987256 | 1..582 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18977751..18978769 | 583..1601 | 100 | <- | Minus |
2L | 18986672..18987256 | 1..582 | 98 | Minus |
Translation from 343 to 996
> SD04693.pep MSVSSNASSASNKDSVDSPSSTTNTDSSELTHILNRRQEIMESQEAGIEV RRTYKVVNVYTDFPEFSRNQIKDYQKTFNTYDTARDGFLDLQELKFMMEK LGAPQTHLGLKQMIAEVDEDNDGKISFREFLLIFRKAQAGELDSDSGLNQ LARLTEVDVEQVGVSGAKNFFEAKIEQQLRTNKFHDEIRAEQEERRREEE ERAQRRQQFQQRAAIFQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14643-PA | 219 | GF14643-PA | 15..190 | 15..188 | 838 | 90.9 | Plus |
Dana\GF17829-PA | 379 | GF17829-PA | 160..375 | 6..217 | 212 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21667-PA | 217 | GG21667-PA | 1..217 | 1..217 | 1137 | 100 | Plus |
Dere\GG16887-PA | 368 | GG16887-PA | 205..362 | 66..217 | 195 | 37.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11598-PA | 219 | GH11598-PA | 28..219 | 26..217 | 756 | 87.5 | Plus |
Dgri\GH18108-PA | 168 | GH18108-PA | 33..146 | 70..178 | 179 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Swip-1-PB | 217 | CG10641-PB | 1..217 | 1..217 | 1087 | 100 | Plus |
Swip-1-PA | 217 | CG10641-PA | 1..217 | 1..217 | 1087 | 100 | Plus |
CG14861-PA | 364 | CG14861-PA | 201..358 | 66..217 | 177 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17167-PA | 218 | GI17167-PA | 30..189 | 29..188 | 786 | 91.9 | Plus |
Dmoj\GI24609-PA | 211 | GI24609-PA | 72..195 | 66..184 | 196 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19621-PA | 222 | GL19621-PA | 31..222 | 26..217 | 807 | 91.7 | Plus |
Dper\GL22131-PA | 367 | GL22131-PA | 196..318 | 59..175 | 189 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10462-PA | 222 | GA10462-PA | 31..222 | 26..217 | 807 | 91.7 | Plus |
Dpse\GA13302-PA | 367 | GA13302-PA | 196..318 | 59..175 | 189 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17046-PA | 217 | GM17046-PA | 1..217 | 1..217 | 1137 | 100 | Plus |
Dsec\GM24196-PA | 364 | GM24196-PA | 200..358 | 66..217 | 188 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21793-PA | 217 | GD21793-PA | 1..217 | 1..217 | 1137 | 100 | Plus |
Dsim\GD18987-PA | 369 | GD18987-PA | 205..363 | 66..217 | 188 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17672-PA | 218 | GJ17672-PA | 30..189 | 29..188 | 785 | 91.2 | Plus |
Dvir\GJ22558-PA | 290 | GJ22558-PA | 151..268 | 66..178 | 147 | 41.2 | Plus |
Translation from 343 to 996
> SD04693.hyp MSVSSNASSASNKDSVDSPSSTTNTDSSELTHILNRRQEIMESQEAGIEV RRTYKVVNVYTDFPEFSRNQIKDYQKTFNTYDTARDGFLDLQELKFMMEK LGAPQTHLGLKQMIAEVDEDNDGKISFREFLLIFRKAQAGELDSDSGLNQ LARLTEVDVEQVGVSGAKNFFEAKIEQQLRTNKFHDEIRAEQEERRREEE ERAQRRQQFQQRAAIFQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Swip-1-PB | 217 | CG10641-PB | 1..217 | 1..217 | 1087 | 100 | Plus |
Swip-1-PA | 217 | CG10641-PA | 1..217 | 1..217 | 1087 | 100 | Plus |
CG14861-PA | 364 | CG14861-PA | 201..358 | 66..217 | 177 | 35.2 | Plus |