BDGP Sequence Production Resources |
Search the DGRC for SD05282
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 52 |
Well: | 82 |
Vector: | pOT2 |
Associated Gene/Transcript | ITP-RD |
Protein status: | SD05282.pep: gold |
Preliminary Size: | 2941 |
Sequenced Size: | 3022 |
Gene | Date | Evidence |
---|---|---|
CG13586 | 2001-01-01 | Release 2 assignment |
CG13586 | 2001-07-04 | Blastp of sequenced clone |
itp | 2008-04-29 | Release 5.5 accounting |
itp | 2008-08-15 | Release 5.9 accounting |
itp | 2008-12-18 | 5.12 accounting |
3022 bp (3022 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060468
> SD05282.complete TTTTTCCTCCCTTCCTTTGGTCTCGCCGGAAAATCCTTGTGTCGCGATCG CGTCCGTTGCCTTGTCTCGAAATCTGCATAAATACAAATATACATAGCTG TGACTATAGCTACGCTGCCGATGTGCAAATATTAATATTTTGAGCTAAAA CATATACTTTTGTGAGCTGGATAAATACGCAAGTGCACATATGTATGTAT GTATGTATTTATACTCGTAGTAGTATCGCCAAAGTGTGTGAATAATCGGT GCGAACGTGGGAATCGCGCTGGCGTTGCAAGTTCGCGGTGCAGTAGTTGC TGCTGTAACGTCAATGTGGAGTGTCAATTATGTGGAAATATATTTACAAA GATGCCCCCTGTTTGTGTGTGTGTGTGTGCGTGCGTGTGTGTGAGTGATT CTCCTGGCACTGAATGTCACTAAAAGAGGGTGGGAGTGGAAGTGGAAGTG GGGCTGCCCTCTTTCCAGTGCGTGTAGATCAGTTACCGCCAGCAGCAACA ACAACAACAACAACAACGAGAACAGCAGCAATAACAAACAAACAAACAAA CAAGCAAGCGACAATTCACATTCATTTCCATTCATTGCTGCGATTATCGC CAGTTTTGCTTTGCTCTTTCACCACGCACGAATACGATTACGAATAACGA ATACGAACGTAGAAAAATGTGCGGGGGCTGCGGAGGCCGAAGCGAATGAA GAGGAAGCGGCAACAGTCGATAAGTTTGCTCTGGGCACGCCCCCTTATGA CGCCCCCTGTGACGCGTTATCAGCGGACACCCAAGAAACACAACAAACAC AAAGACCTGACCAAAATCCACACAAAATGGCGATAAACTCGAGTGCCAGA GAATCGCCGCGGGCCTAAAAAGTTCGTTCCCCAAAATACAAAAAGAGGAG GTAAACAAACTCGTTTCTGCCCCACAACAACACCACCCATGCCCCCCGAA AACCGAGAGATCCCGCACCACAACCAGCGATAAGCATCCGAAGACGAAGA TTTGGGTGGCCCAGTCCACAGAAAGCCCCGCACCAACCCCGAAACAAGCG CCTAAGATGTGTTCCCGCAACATAAAGATCTCGGTGGTGCTGTTTCTCGT CCTGATACCAATCTTCGCCGCCTTGCCACACAACCACAATCTGTCGAAGC GCAGCAACTTCTTCGACCTGGAGTGCAAGGGCATCTTCAACAAGACCATG TTCTTCCGACTGGACCGCATCTGCGAGGACTGCTACCAGTTGTTCCGCGA GACGAGTATACACCGATTATGCAAGAAAGACTGCTTTGATTCAAAATGGT TTGGCGAATGCCTGAAAGTGCTGTTAATACCCGAAGAGGAAATATCCAAC CTACAGCACTTTCTGAGAGTAGTGAACGGCTCGCCCATATCCTTCAACAT GGGGCCGCAAACATAACTCTAAGTCCCCGCCCCACACACCCACAGCCCCA ACACACCATACAGCACACAACAAACAACACACACCACACACAGCTGAGAA TCGCTGCGAATATCGTGTGTTGGAACGGGCATCCGCATCCAGATACAGAT CCAGATCCAGATCGAGAAACAGTCCCACTACGACCACACATGCAGAGCCA GAACACAGAAATCTAAAATATTAAAACGCCCAAATTTAATTCGTACTTAT TTATTACTGTATGCCTTACAGTTTTTACTATATGTGTTTTTTTAAAAACG AATTATTTTTATTAATTTATTGAGAACGTTATGCGTTTGTTGTAAGTAAC ATAATTGGGGAGTGGGAGATGGGCGATGATGATGATCAGATGATGATGAT GATGATGTGCAGGAGGAGGATCGCAGATCTCGCACTCCCCACATATACAT AGAAGCCGAAGTATTTATTTTTAAGTATTCTTAGCTTGTTTTATTATTAT TGCGTTATGCGGTTTGTATATAAAATAAACAAAACGAAATCCATTGTTTT TAATCTATGTAATGTAAAATGATAACTTTTATTTTTGTATCTGTATTCTA CTGTAAAATCAGCATTTAGAGTTTACATTTTACACGATTTTCCGCAAGGG CAAAACTACAATAAAGATAAACCCATACGAACACACACATACACACATAC ACACATACACACACACTCACACACACACATATATACACCGCAATCGAGAC CGAAAGTATTTTGCAAATGTATTACACTTACAATTTTGTGCTATTTTGTA AAGATGAAACCCTGAATTAGTGTAAATCTGTTGGCGCAAAACGGAGATAT GTATTTACCTATATAGTATATAGTATATGCATACCTATCTAAAGCTAAAG CCTTACATATATCCGAATACGAGTACCCTACACACATGCTAAATATTAGA GAGAAACGCAAGATCGCAATTTGTGCAAGACACAAACAAAAACCTGGTAA AAACACGCGAAGAACGGAACGACTGCATTACAAATGTGGCAATAAATAAT ACATAATTAATAAAACCCTGTAAATTAATAAGGATAATCAATCATTCGCT GGCTATTTGAGAGCATCAAAATTGTGATAAATGAGAATTAGAATGCGAAT GCGCGACGCAGGACACCGCCAGAGAAAGAGACCGCCATACAGAAGGCGAC AGAGACAGACAGACTGCAGCTGGCGATTTGCGCGCGTTTCTGGCGCGACT AAAAACGCCTGCTTACCGTTTTTGTTTTGGCAAGAATGCTTCGGATCGCC CTTCTTCAACGCCTGCATAGAGGCTCTTCAGCTGCACGAGGAGATGGACA AGTATAACGAATGGCGCGATACCCTGGGTCGCAAGTAAAGTGCGATTCTC TGGGATTTTCTGGCACCGTCACTGGCACGAGCAGCTACTTAATTCTATGA ACTATTAACTAAAACTATTATTATTGATAACTGTGGCAGAACACGGCACG AAACTATGGCAACCAGGAAACGATCGACCCGAGGAATGTGTACCACTTGA AGAAACAACTAAGCTAAACATCTAGCTACAAGAGAAAGCAGAGCAAAAAT GTTGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
itp-RD | 3692 | itp-RD | 1032..3102 | 953..3013 | 10005 | 99.1 | Plus |
itp-RF | 3218 | itp-RF | 662..2628 | 1057..3013 | 9485 | 99.1 | Plus |
itp-RD | 3692 | itp-RD | 87..1035 | 1..949 | 4730 | 99.8 | Plus |
itp-RE | 2262 | itp-RE | 87..1035 | 1..949 | 4730 | 99.8 | Plus |
itp-RE | 2262 | itp-RE | 1354..1686 | 2680..3013 | 1630 | 99.7 | Plus |
itp-RE | 2262 | itp-RE | 1032..1365 | 953..1286 | 1625 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20442221..20443631 | 1275..2680 | 6660 | 98.7 | Plus |
chr2R | 21145070 | chr2R | 20425887..20426942 | 1..1056 | 5265 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 20443960..20444284 | 2679..3004 | 1580 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 20441288..20441512 | 1055..1279 | 1095 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24556284..24557700 | 1275..2680 | 6755 | 98.9 | Plus |
2R | 25286936 | 2R | 24539972..24541020 | 1..1056 | 5125 | 99.2 | Plus |
2R | 25286936 | 2R | 24558029..24558362 | 2679..3013 | 1625 | 99.7 | Plus |
2R | 25286936 | 2R | 24555352..24555576 | 1055..1279 | 1095 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24557483..24558899 | 1275..2680 | 6785 | 98.9 | Plus |
2R | 25260384 | 2R | 24541171..24542119 | 1..949 | 4730 | 99.8 | Plus |
2R | 25260384 | 2R | 24559228..24559561 | 2679..3013 | 1635 | 99.7 | Plus |
2R | 25260384 | 2R | 24556551..24556775 | 1055..1279 | 1095 | 99.1 | Plus |
2R | 25260384 | 2R | 24542116..24542219 | 953..1056 | 520 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy2 | 6841 | gypsy2 GYPSY2 6841bp | 5005..5069 | 1876..1937 | 120 | 69.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20425887..20426942 | 1..1056 | 99 | -> | Plus |
chr2R | 20441290..20441507 | 1057..1274 | 99 | -> | Plus |
chr2R | 20442221..20443630 | 1275..2679 | 98 | -> | Plus |
chr2R | 20443961..20444284 | 2680..3004 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
itp-RD | 1..360 | 1057..1416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
itp-RD | 1..360 | 1057..1416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
itp-RF | 1..360 | 1057..1416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
itp-RD | 1..360 | 1057..1416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ITP-RF | 1..360 | 1057..1416 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
itp-RD | 1..3007 | 1..3004 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
itp-RD | 31..3037 | 1..3004 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
itp-RD | 32..3038 | 1..3004 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
itp-RD | 1..3007 | 1..3004 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ITP-RD | 32..3038 | 1..3004 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24539972..24541020 | 1..1056 | 99 | -> | Plus |
2R | 24555354..24555571 | 1057..1274 | 99 | -> | Plus |
2R | 24556284..24557699 | 1275..2679 | 98 | -> | Plus |
2R | 24558030..24558353 | 2680..3004 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24539972..24541020 | 1..1056 | 99 | -> | Plus |
2R | 24555354..24555571 | 1057..1274 | 99 | -> | Plus |
2R | 24556284..24557699 | 1275..2679 | 98 | -> | Plus |
2R | 24558030..24558353 | 2680..3004 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24539972..24541020 | 1..1056 | 99 | -> | Plus |
2R | 24555354..24555571 | 1057..1274 | 99 | -> | Plus |
2R | 24556284..24557699 | 1275..2679 | 98 | -> | Plus |
2R | 24558030..24558353 | 2680..3004 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20427495..20428543 | 1..1056 | 99 | -> | Plus |
arm_2R | 20442877..20443094 | 1057..1274 | 99 | -> | Plus |
arm_2R | 20443807..20445222 | 1275..2679 | 98 | -> | Plus |
arm_2R | 20445553..20445876 | 2680..3004 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24541189..24542237 | 1..1056 | 99 | -> | Plus |
2R | 24556571..24556788 | 1057..1274 | 99 | -> | Plus |
2R | 24557501..24558916 | 1275..2679 | 98 | -> | Plus |
2R | 24559247..24559570 | 2680..3004 | 99 | Plus |
Translation from 938 to 1415
> SD05282.hyp MPPERSRTTTSDKHPKTKIWVAQSTESPAPTPKQAPKMCSRNIKISVVLF LVLIPIFAALPHNHNLSKRSNFFDLECKGIFNKTMFFRLDRICEDCYQLF RETSIHRLCKKDCFDSKWFGECLKVLLIPEEEISNLQHFLRVVNGSPISF NMGPQT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ITP-PG | 119 | CG13586-PG | 1..119 | 38..156 | 641 | 100 | Plus |
ITP-PD | 119 | CG13586-PD | 1..119 | 38..156 | 641 | 100 | Plus |
ITP-PF | 119 | CG13586-PF | 1..119 | 38..156 | 641 | 100 | Plus |
ITP-PC | 119 | CG13586-PC | 1..114 | 38..151 | 529 | 86 | Plus |
ITP-PE | 108 | CG13586-PE | 1..94 | 38..131 | 441 | 86.2 | Plus |
Translation from 1056 to 1415
> SD05282.pep MCSRNIKISVVLFLVLIPIFAALPHNHNLSKRSNFFDLECKGIFNKTMFF RLDRICEDCYQLFRETSIHRLCKKDCFDSKWFGECLKVLLIPEEEISNLQ HFLRVVNGSPISFNMGPQT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13627-PA | 119 | GF13627-PA | 1..119 | 1..119 | 612 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22978-PA | 119 | GG22978-PA | 1..119 | 1..119 | 623 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19999-PA | 254 | GH19999-PA | 136..254 | 1..119 | 607 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ITP-PG | 119 | CG13586-PG | 1..119 | 1..119 | 641 | 100 | Plus |
ITP-PD | 119 | CG13586-PD | 1..119 | 1..119 | 641 | 100 | Plus |
ITP-PF | 119 | CG13586-PF | 1..119 | 1..119 | 641 | 100 | Plus |
ITP-PC | 119 | CG13586-PC | 1..114 | 1..114 | 529 | 86 | Plus |
ITP-PE | 108 | CG13586-PE | 1..94 | 1..94 | 441 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19181-PA | 121 | GI19181-PA | 1..117 | 1..117 | 581 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10219-PA | 158 | GL10219-PA | 39..155 | 1..117 | 612 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12379-PB | 120 | GA12379-PB | 1..117 | 1..117 | 601 | 97.4 | Plus |
Dpse\GA12379-PD | 119 | GA12379-PD | 1..114 | 1..114 | 504 | 84.2 | Plus |
Dpse\GA12379-PC | 108 | GA12379-PC | 1..94 | 1..94 | 419 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11873-PA | 119 | GM11873-PA | 1..119 | 1..119 | 613 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11871-PA | 149 | GD11871-PA | 31..149 | 1..119 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20243-PA | 119 | GJ20243-PA | 1..119 | 1..119 | 589 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19672-PA | 127 | GK19672-PA | 8..124 | 1..117 | 586 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14416-PA | 119 | GE14416-PA | 1..119 | 1..119 | 623 | 100 | Plus |