Clone SD05591 Report

Search the DGRC for SD05591

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:55
Well:91
Vector:pOT2
Associated Gene/TranscriptCG5721-RA
Protein status:SD05591.pep: gold
Preliminary Size:1677
Sequenced Size:1602

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5721 2001-01-01 Release 2 assignment
CG5721 2001-07-04 Blastp of sequenced clone
CG5721 2003-01-01 Sim4 clustering to Release 3
CG5721 2008-04-29 Release 5.5 accounting
CG5721 2008-08-15 Release 5.9 accounting
CG5721 2008-12-18 5.12 accounting

Clone Sequence Records

SD05591.complete Sequence

1602 bp (1602 high quality bases) assembled on 2001-07-04

GenBank Submission: AY052110

> SD05591.complete
ACAGAGAGAACAAAGTAAAATTTGAAAAGTTAAAGCTGCAGCTGCTGAGG
GCATAGCCAAAATTGGACGAATCACTGCCATGGCCAAGGTTATATCGCAG
GACACCTTCGACGATGTTGTGAAGGAGAACGTTGTGGAGTTCTCGATGAC
TCCTTCGGAGGCGAAAGAAGAGACCATCAAGCAATTCGAGGCACAGGGCA
TCAACCTGGCCAACATTATCAAGGACCTGTCCGTCAATCCGCAAACCGGC
CAACCTGTCATCAACGAAACGGTGGACAAGATCAAGGAGCACATTGGCCA
AAAACTGGAGGAAACAACGGAGCTGCTGGAACAGCTGGCCACCTTGGATG
CTGAGTGCAAAAAGTCGCTAGCCCATAGGGTTCTAGCCGGCAAAAATGGA
GCCCACGATGCCCTGATCACCCTGTTGGAGGAGACGCTCTCTGCTGAGTC
ACCCAACGAATCCGTGTTAAAAAAGTCCTTGGAAGCCATCAACAGCCTGA
CCCACAAGCAGCCGGATCTGTTTGATGCCGAGGCGATGGCCGTGGTTCTC
AAGTTACTGGCCCTCAAAGTGGAGAGTGAAGAAGTCACCCTGTTGACTCT
TCAATGGCTGCAGAAGGCCTGCATCATGCATGAAATGAACCGCCAGAATA
TCATGAATACCTCCGCACTCAAACTCATGAAGCCCCTTTTAGGGAAAGGG
AAGGACCGCCTGGTGCGTGAACTGACCGCCGTCTTCCGCTTCCTAGTGCT
GGATGATGACATTCGCGTTGAGTTTGGATGCGCCCACGAGCACGCCCGCC
AAATAGCAGGCGAGGTGCTCATCACCTTGGTGGAACTTTTGCCGGCCTAT
CAGGATCCTAATGTTCTGGCTGATCTTCTGCTGACCATTGGAACACTGGC
TGTGCGTCAGGAACTCTGTACAGCTATCGACGAGGCTGGTGGACTGAAGT
CCGTCTTCGAGATCATGAGTTCGAATTTGGATGAGGTGCGTCTAAATAGA
GAGGCCTTAAAGTTGCTACGTGCCCTGGCTGGCCAAGACTCCGTGAAGTC
ACATATAGTACAGCAGGGCGTGGCTCCTATAATAAAGCAATTGCTAGAGA
CGCACCAGTCCAATGAAAACATCGTTGCCGCCGCTTTGGCCTGCGTGACT
ACTCTGACACTCCGAGTGCAGGAACACAGTGCCGCCTTTTTCGATACCGG
CATCGCCGAAGTAATCGTGGAGGCTCTTCGCGCCCATCCCAAACACAAGA
TAGTCCAGCGAAACGGAGCGTGGGCCATCCGCAATATGGTGTCACGGTCG
CGGAACCAGTGTGAAACCTGGATCTCCTTCGGCGTTGAGGATCTACTAAA
TATGGCAATGAAGGAGCACCCCAGTGTGGAGCAGGACATCAAGGCGGCGT
TGCGCGACCTCGGCTGTAGTGTCCACTTGCGCGAGGAATGGACGGGCACG
GCGGAGAAAAAAATTGCCGCCTAATCGCACACACATATGCCTTTTGTATT
TTTATATATTTACTGCTAAATTATTACTATTGCTTAATTCATGCATTGGC
TAACTAACAAAATCGGCAATCCTCAATACCAAAAAAAAAAAAAAAAAAAA
AA

SD05591.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:26:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG5721-RA 1768 CG5721-RA 150..1731 1..1582 7910 100 Plus
nopo.a 1671 nopo.a 1585..1671 1582..1496 435 100 Minus
nopo-RA 1719 nopo-RA 1633..1719 1582..1496 435 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:52:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 14069570..14070956 1580..194 6905 99.9 Minus
chr2R 21145070 chr2R 14071008..14071204 197..1 985 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:49:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:52:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18182433..18183821 1582..194 6945 100 Minus
2R 25286936 2R 18183873..18184069 197..1 985 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:48:42
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 18183632..18185020 1582..194 6945 100 Minus
2R 25260384 2R 18185072..18185268 197..1 985 100 Minus
Blast to na_te.dros performed on 2019-03-16 07:52:35 has no hits.

SD05591.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:53:17 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 14069570..14070953 197..1580 99 <- Minus
chr2R 14071009..14071204 1..196 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:01:19 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5721-RA 1..1395 80..1474 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:12:22 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5721-RA 1..1395 80..1474 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:49:16 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5721-RA 1..1395 80..1474 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:43:28 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5721-RA 1..1395 80..1474 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:43:04 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5721-RA 1..1395 80..1474 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:04:30 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5721-RA 45..1624 1..1580 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:12:22 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5721-RA 45..1624 1..1580 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:49:16 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5721-RA 22..1601 1..1580 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:43:29 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5721-RA 45..1624 1..1580 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:43:04 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
CG5721-RA 22..1601 1..1580 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:53:17 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18182435..18183818 197..1580 100 <- Minus
2R 18183874..18184069 1..196 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:53:17 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18182435..18183818 197..1580 100 <- Minus
2R 18183874..18184069 1..196 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:53:17 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18182435..18183818 197..1580 100 <- Minus
2R 18183874..18184069 1..196 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:49:16 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14069940..14071323 197..1580 100 <- Minus
arm_2R 14071379..14071574 1..196 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:21:10 Download gff for SD05591.complete
Subject Subject Range Query Range Percent Splice Strand
2R 18183634..18185017 197..1580 100 <- Minus
2R 18185073..18185268 1..196 100   Minus

SD05591.hyp Sequence

Translation from 79 to 1473

> SD05591.hyp
MAKVISQDTFDDVVKENVVEFSMTPSEAKEETIKQFEAQGINLANIIKDL
SVNPQTGQPVINETVDKIKEHIGQKLEETTELLEQLATLDAECKKSLAHR
VLAGKNGAHDALITLLEETLSAESPNESVLKKSLEAINSLTHKQPDLFDA
EAMAVVLKLLALKVESEEVTLLTLQWLQKACIMHEMNRQNIMNTSALKLM
KPLLGKGKDRLVRELTAVFRFLVLDDDIRVEFGCAHEHARQIAGEVLITL
VELLPAYQDPNVLADLLLTIGTLAVRQELCTAIDEAGGLKSVFEIMSSNL
DEVRLNREALKLLRALAGQDSVKSHIVQQGVAPIIKQLLETHQSNENIVA
AALACVTTLTLRVQEHSAAFFDTGIAEVIVEALRAHPKHKIVQRNGAWAI
RNMVSRSRNQCETWISFGVEDLLNMAMKEHPSVEQDIKAALRDLGCSVHL
REEWTGTAEKKIAA*

SD05591.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:38:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG5721-PA 464 CG5721-PA 1..464 1..464 2311 100 Plus

SD05591.pep Sequence

Translation from 79 to 1473

> SD05591.pep
MAKVISQDTFDDVVKENVVEFSMTPSEAKEETIKQFEAQGINLANIIKDL
SVNPQTGQPVINETVDKIKEHIGQKLEETTELLEQLATLDAECKKSLAHR
VLAGKNGAHDALITLLEETLSAESPNESVLKKSLEAINSLTHKQPDLFDA
EAMAVVLKLLALKVESEEVTLLTLQWLQKACIMHEMNRQNIMNTSALKLM
KPLLGKGKDRLVRELTAVFRFLVLDDDIRVEFGCAHEHARQIAGEVLITL
VELLPAYQDPNVLADLLLTIGTLAVRQELCTAIDEAGGLKSVFEIMSSNL
DEVRLNREALKLLRALAGQDSVKSHIVQQGVAPIIKQLLETHQSNENIVA
AALACVTTLTLRVQEHSAAFFDTGIAEVIVEALRAHPKHKIVQRNGAWAI
RNMVSRSRNQCETWISFGVEDLLNMAMKEHPSVEQDIKAALRDLGCSVHL
REEWTGTAEKKIAA*

SD05591.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:43:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12776-PA 467 GF12776-PA 1..467 1..464 2131 88.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:43:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20984-PA 464 GG20984-PA 1..464 1..464 2357 96.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:43:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19721-PA 463 GH19721-PA 1..463 1..464 1952 79.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG5721-PA 464 CG5721-PA 1..464 1..464 2311 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:43:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20141-PA 463 GI20141-PA 1..463 1..464 1854 76.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:43:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16717-PA 471 GL16717-PA 1..471 1..464 1965 81.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19084-PA 471 GA19084-PA 1..471 1..464 1966 81.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19919-PA 432 GM19919-PA 1..432 1..464 2197 91.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:43:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25408-PA 464 GD25408-PA 1..464 1..464 2405 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22418-PA 463 GJ22418-PA 1..463 1..464 1813 76.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:43:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23243-PA 463 GK23243-PA 1..463 1..464 2004 80.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:43:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13926-PA 464 GE13926-PA 1..464 1..464 2372 97.4 Plus