BDGP Sequence Production Resources |
Search the DGRC for SD05789
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 57 |
Well: | 89 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12016-RA |
Protein status: | SD05789.pep2: gold SD05789.pep: gold |
Preliminary Size: | 2353 |
Sequenced Size: | 2330 |
Gene | Date | Evidence |
---|---|---|
CG12016 | 2001-07-04 | Blastp of sequenced clone |
CG12016 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12016 | 2008-04-29 | Release 5.5 accounting |
CG12016 | 2008-08-15 | Release 5.9 accounting |
CG42456 | 2008-12-18 | 5.12 accounting |
CG12016 | 2008-12-18 | 5.12 accounting |
Dpm2 | 2020-09-28 | Sue said so |
2330 bp (2330 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060471.1
> SD05789.complete TGAATTCGGAAATTTTTTGACGCACTTGTTTGTTTTGTTTACAATTACGC CACGAAAGTAAATCGGCAGCTACGAAAAAACATTAGGGATTCGTGCGGCG GGTAAACGATCAGTGGACAGTGAAGCAGTCCGTCCGGGGAGAACGCCCCA TGAGCAGTTTTACAAACAAATCGCCGGTCGCGTGTTCTCTCGCCAGAGAA ACCCCAGAATTTCCGAGAATAGCTATTTATGGCTTCGAATGCGCAACTCG GGAAAATCATTTTGATATCTGCAATCGCCGTGTTCTTCTATTACTTCTTT TGGGTGGCCGTCCTCCCGTTTATGCTCATCGATGAAGGCAATCCCATTCG GCTGTTCTTTCCACCGCTGAAGTACGCTTTCATTGTGCCCACCGTGTTCG GGGTGATCTTCCTCGGCGGCATCGCCGCGTTCTCCTTTTACCACATCTGG AGCCTGAGAGTGAAACGTGATTAAGGGGGTTATCCGGGGGGTTATCTTGC GCGGTGCGAACGCGAACGTACGATTCCACTGAAAAACAAGGAAGAGCGAT AGTCAGTCGTGGACAAGATGCCGCAGTGGCTGGTCATTGGTATCTCGGGT GTCACCTGTGGTGGCAAAACGACGCTAGCCCACAGCCTGCACGACTACTT CAAGGGTCTGAGAGGAGCGCCGCTGTGGAACTCGCCGTACACCATTGGCG AGGTGCGTCTGATCTCGCAGGATGACTACTTTCTGCCCGTGGAGGACAAG CGACATCAGCGAAATGAGGCGCTCAACGCCATCAACTTCGAGCTCATCAC CTCGCTGGACATGGCCAAGATGCTGAACGACATAGCGCACATAATCAAGG GGCGCCATGTGGCTCCCGAGCCACAGGAGCACCTTGTGACGTATGCCAAC TTCGAGCACTACGCCCAGCAGTTCCAGCAGCAGTACCAGTACAATGCGAA CTACTACAAACAGGCCAATGGCGGGGTCTATCAATATCCGCCACAGCAGC ACCCGAGACATCACCCCCATCACCAGCAGCACCACCACCAGCACCATCAA ATCCAGCAGCAGCAGCAGCACATTATGAGCATCAATGCGCAGATTGCCGC CCAGCTGAGGGACAAGAAGGTCAATTTCCTCCTGGTCGAGGGATTCATGA TCTTCAACCAGCCGGAGCTGCTGGCCCTGTGCAACATTAAGTACCACTTC CATCTGCCATATGAGAAGTGCTTCGAACGGCGCAGTAAGCGCACATACGA TCCACCCGATGTCACGGGCTACTTCGAGCTCTGTGTGTGGCCGCACTATG AAAAGAACTTCAGCGAGTACCGCGACTGCAAGGACATTACATTCCTCAAT GGCGAGATCGCCAAAGAGAAGATCCTCGCGTTCGTCCTTCATCGCATCGT CCACTACTTCAAGGAGCGCTGCGAGGTTCCAGCTCCTGCTCCCGTCGTCT GCCCGCCGCAGCAGAAACGGTTCGGGATGCTCTACATGGGTCCGAGCAAT AACAACGTCATGCCGTCGGCGTGTCCCATGGAGCAATAGTTTGTCCTTGG ATTCAGAGTACAATAATTGAATATTGTATAGTAGTAGGATGTTAAACGGT TCAAAATTGTTTGGATTACTTCTCCGAATCGTGGCTAAAATTCCCATATT ACGTTATAGTTGTAAGCTACTCTAAGGGTGGTTCGATTTTAAATTGTTAA AAGTATGATCTAAAATCAATTATTTAATTCAAATTAAAAATGTGAGTTTT TGGAACTTGAGCAAATTTTAAGCACCGCAAAGTCCAAAGAAAAGTGCAGT ATTGTTTAGAGAATATTTTGATTGTTTGATTGCCCAACCTACAACTTCCA CGACCAATTTGCTTACAGTTTCTATCTTCTTTTTACGGAACAATCGAAAC AAATCGACCCGCCCTAGAATACAACTATTATTAGTTAGTCTTTATTTCGT ATTAAGATAGTTATTATGGGTGACATGGTCTCTCTTGTGGAGAATGCTCT TGTAACCAGATTGTGAAATGAAGAAACTCGGTTCAGGAATTCATATTTAG CTGTGCTAACTATTATATTGTATTGTTTACTATTACGTCATGGAATTTAG AAAAACCCCAACGAGGCATTTGGTGTGGGGCGTTTTTATGGAGTCGAAAA GTTATTGTACTATATAATGGATATTTATATATGCACCTTGTAAATACCGT AGTGTATATTTACCAAATTAAACCTAGCTTTAAGACTATGACCTAAAAGA ATTATATATTTTTTTCTTGTGCGAAACAAAACACACATACGAATAAACAG ACATTTAACCTCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12016-RA | 2324 | CG12016-RA | 13..2324 | 1..2312 | 11455 | 99.6 | Plus |
CG42456-RA | 2312 | CG42456-RA | 1..2312 | 1..2312 | 11455 | 99.6 | Plus |
CG12016-RB | 1995 | CG12016-RB | 21..1995 | 338..2312 | 9770 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg3 | 5519 | mdg3 DMMDG3 5519bp Derived from X95908 (e990667) (Rel. 49, Last updated, Version 3). | 2961..3025 | 1691..1755 | 127 | 70.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 3318979..3319315 | 1..337 | 99 | -> | Plus |
chr3L | 3319925..3320580 | 338..993 | 99 | == | Plus |
chr3L | 3320658..3321899 | 1071..2312 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12016-RB | 1..972 | 568..1539 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12016-RB | 1..972 | 568..1539 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12016-RA | 1..972 | 568..1539 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12016-RB | 1..972 | 568..1539 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12016-RA | 1..972 | 568..1539 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42456-RA | 1..2312 | 1..2312 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42456-RA | 1..2312 | 1..2312 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42456-RA | 15..2326 | 1..2312 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12016-RA | 13..2324 | 1..2312 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12016-RA | 15..2326 | 1..2312 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3319569..3319905 | 1..337 | 100 | -> | Plus |
3L | 3320515..3322489 | 338..2312 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3319569..3319905 | 1..337 | 100 | -> | Plus |
3L | 3320515..3322489 | 338..2312 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3319569..3319905 | 1..337 | 100 | -> | Plus |
3L | 3320515..3322489 | 338..2312 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 3319569..3319905 | 1..337 | 100 | -> | Plus |
arm_3L | 3320515..3322489 | 338..2312 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 3319569..3319905 | 1..337 | 100 | -> | Plus |
3L | 3320515..3322489 | 338..2312 | 99 | Plus |
Translation from 228 to 473
> SD05789.pep2 MASNAQLGKIILISAIAVFFYYFFWVAVLPFMLIDEGNPIRLFFPPLKYA FIVPTVFGVIFLGGIAAFSFYHIWSLRVKRD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10529-PA | 81 | GF10529-PA | 1..81 | 1..81 | 364 | 90.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15130-PA | 81 | GG15130-PA | 1..81 | 1..81 | 401 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15951-PA | 52 | GH15951-PA | 1..49 | 32..80 | 191 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42456-PA | 81 | CG42456-PA | 1..81 | 1..81 | 422 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16603-PA | 83 | GI16603-PA | 1..81 | 1..81 | 334 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16137-PA | 81 | GL16137-PA | 1..81 | 1..81 | 392 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28395-PA | 81 | GA28395-PA | 1..81 | 1..81 | 392 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14563-PA | 81 | GM14563-PA | 1..81 | 1..81 | 404 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13755-PA | 81 | GD13755-PA | 1..81 | 1..81 | 404 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12856-PA | 83 | GJ12856-PA | 1..83 | 1..81 | 324 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21356-PA | 81 | GE21356-PA | 1..81 | 1..81 | 393 | 96.3 | Plus |
Translation from 567 to 1538
> SD05789.hyp MPQWLVIGISGVTCGGKTTLAHSLHDYFKGLRGAPLWNSPYTIGEVRLIS QDDYFLPVEDKRHQRNEALNAINFELITSLDMAKMLNDIAHIIKGRHVAP EPQEHLVTYANFEHYAQQFQQQYQYNANYYKQANGGVYQYPPQQHPRHHP HHQQHHHQHHQIQQQQQHIMSINAQIAAQLRDKKVNFLLVEGFMIFNQPE LLALCNIKYHFHLPYEKCFERRSKRTYDPPDVTGYFELCVWPHYEKNFSE YRDCKDITFLNGEIAKEKILAFVLHRIVHYFKERCEVPAPAPVVCPPQQK RFGMLYMGPSNNNVMPSACPMEQ*
Translation from 567 to 1538
> SD05789.pep MPQWLVIGISGVTCGGKTTLAHSLHDYFKGLRGAPLWNSPYTIGEVRLIS QDDYFLPVEDKRHQRNEALNAINFELITSLDMAKMLNDIAHIIKGRHVAP EPQEHLVTYANFEHYAQQFQQQYQYNANYYKQANGGVYQYPPQQHPRHHP HHQQHHHQHHQIQQQQQHIMSINAQIAAQLRDKKVNFLLVEGFMIFNQPE LLALCNIKYHFHLPYEKCFERRSKRTYDPPDVTGYFELCVWPHYEKNFSE YRDCKDITFLNGEIAKEKILAFVLHRIVHYFKERCEVPAPAPVVCPPQQK RFGMLYMGPSNNNVMPSACPMEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10530-PA | 326 | GF10530-PA | 1..326 | 1..323 | 1332 | 82.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15131-PA | 320 | GG15131-PA | 1..320 | 1..323 | 1406 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15952-PA | 341 | GH15952-PA | 1..341 | 1..323 | 1080 | 69.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12016-PB | 323 | CG12016-PB | 1..323 | 1..323 | 1788 | 100 | Plus |
CG12016-PA | 323 | CG12016-PA | 1..323 | 1..323 | 1788 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16604-PA | 353 | GI16604-PA | 198..353 | 170..323 | 716 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16138-PA | 321 | GL16138-PA | 1..321 | 1..323 | 1204 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11339-PA | 335 | GA11339-PA | 1..335 | 1..323 | 1270 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14564-PA | 323 | GM14564-PA | 1..323 | 1..323 | 1446 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13756-PA | 323 | GD13756-PA | 1..323 | 1..323 | 1455 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12857-PA | 329 | GJ12857-PA | 1..329 | 1..323 | 1112 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20507-PA | 355 | GK20507-PA | 1..355 | 1..323 | 1087 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21357-PA | 322 | GE21357-PA | 1..322 | 1..323 | 1441 | 93.5 | Plus |