BDGP Sequence Production Resources |
Search the DGRC for SD06593
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 65 |
Well: | 93 |
Vector: | pOT2 |
Associated Gene/Transcript | Tim8-RA |
Protein status: | SD06593.pep: gold |
Preliminary Size: | 593 |
Sequenced Size: | 702 |
Gene | Date | Evidence |
---|---|---|
CG1728 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1728 | 2002-06-04 | Blastp of sequenced clone |
CG1728 | 2003-01-01 | Sim4 clustering to Release 3 |
Tim8 | 2008-04-29 | Release 5.5 accounting |
Tim8 | 2008-08-15 | Release 5.9 accounting |
Tim8 | 2008-12-18 | 5.12 accounting |
702 bp (702 high quality bases) assembled on 2002-06-04
GenBank Submission: AY118649
> SD06593.complete AACCTCAAACCTTAGAATATATGAAATTCCGGACGAGCCCGGTCAATTTG TAGATTGCTCACTGAAAATCACACGATGTCCGATTTTGAGAACCTTTCCG GCAATGACAAGGAGCTGCAGGAGTTCCTCTTGATTGAGAAACAGAAGGCA CAGGTCAACGCGCAGATACACGAGTTCAACGAGATCTGCTGGGAGAAGTG CATCGGCAAGCCGAGTACCAAGCTGGACCACGCCACCGAGACGTGCCTGA GCAACTGCGTCGACCGATTCATCGACACGTCGCTGCTTATCACCCAGCGG TTCGCTCAGATGCTCCAAAAGCGAGGTGGCGGCGACCTGTAGATTTGTTC GCTTAATCGACACCGACACCGGGATCTGGGTATCCGAGTCCGTGGACGCT TCCGTCACTGTCCTACTGTTAAATCTATTTTTAAACAAAAAATTATCATG TAAGCACATTTTTTTCCGCGCTGCGTTTTCGCCGCCGACATCCAAAGTAT GTGGCCCGTAGTCTGCACCCAGCCCGAAATTGAAATCCGTGATTCGAGTT CCGGAATTAATATTTAATTCGGTAGCGCAACTCAATTGTTTGGTCGGCCC TACGTTAGCGTACCGAAAATAAATACATCTTTCGTTTCGTACGTTTAAAA AAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tim8-RA | 873 | Tim8-RA | 111..759 | 1..650 | 3210 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 3256..3287 | 180..211 | 106 | 81.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11259621..11259785 | 1..165 | 100 | -> | Plus |
chrX | 11259864..11260347 | 166..650 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tim8-RA | 1..267 | 76..342 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tim8-RA | 1..267 | 76..342 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tim8-RA | 1..267 | 76..342 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tim8-RA | 1..267 | 76..342 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tim8-RA | 1..267 | 76..342 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tim8-RA | 1..645 | 1..646 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tim8-RA | 1..645 | 1..646 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tim8-RB | 17..665 | 1..650 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tim8-RA | 1..645 | 1..646 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tim8-RB | 17..665 | 1..650 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11368461..11368625 | 1..165 | 100 | -> | Plus |
X | 11368704..11369187 | 166..650 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11368461..11368625 | 1..165 | 100 | -> | Plus |
X | 11368704..11369187 | 166..650 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11368461..11368625 | 1..165 | 100 | -> | Plus |
X | 11368704..11369187 | 166..650 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11262494..11262658 | 1..165 | 100 | -> | Plus |
arm_X | 11262737..11263220 | 166..650 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11376802..11377285 | 166..650 | 99 | Plus | |
X | 11376559..11376723 | 1..165 | 100 | -> | Plus |
Translation from 75 to 341
> SD06593.pep MSDFENLSGNDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCIGKPSTKL DHATETCLSNCVDRFIDTSLLITQRFAQMLQKRGGGDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19075-PA | 89 | GF19075-PA | 1..89 | 1..88 | 447 | 96.6 | Plus |
Dana\GF21863-PA | 84 | GF21863-PA | 15..79 | 20..82 | 134 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18412-PA | 87 | GG18412-PA | 1..87 | 1..88 | 435 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12183-PA | 88 | GH12183-PA | 1..88 | 1..88 | 394 | 81.8 | Plus |
Dgri\GH10210-PA | 82 | GH10210-PA | 13..77 | 20..82 | 129 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tim8-PB | 88 | CG1728-PB | 1..88 | 1..88 | 464 | 100 | Plus |
Tim8-PA | 88 | CG1728-PA | 1..88 | 1..88 | 464 | 100 | Plus |
CG34132-PA | 84 | CG34132-PA | 15..79 | 20..82 | 135 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15714-PA | 88 | GI15714-PA | 1..88 | 1..88 | 435 | 92 | Plus |
Dmoj\GI14974-PA | 84 | GI14974-PA | 15..79 | 20..82 | 129 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14853-PA | 86 | GL14853-PA | 1..84 | 1..83 | 380 | 86.9 | Plus |
Dper\GL19513-PA | 84 | GL19513-PA | 1..83 | 1..83 | 337 | 68.7 | Plus |
Dper\GL19514-PA | 76 | GL19514-PA | 14..75 | 22..88 | 158 | 46.3 | Plus |
Dper\GL20826-PA | 92 | GL20826-PA | 17..90 | 20..88 | 130 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14436-PA | 86 | GA14436-PA | 1..84 | 1..83 | 384 | 88.1 | Plus |
Dpse\GA25988-PA | 84 | GA25988-PA | 1..83 | 1..83 | 322 | 67.5 | Plus |
Dpse\GA25989-PA | 76 | GA25989-PA | 14..75 | 22..88 | 160 | 46.3 | Plus |
Dpse\GA11098-PA | 92 | GA11098-PA | 17..90 | 20..88 | 130 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11476-PA | 88 | GM11476-PA | 1..88 | 1..88 | 463 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15242-PA | 88 | GJ15242-PA | 1..88 | 1..88 | 438 | 93.2 | Plus |
Dvir\GJ17233-PA | 83 | GJ17233-PA | 14..78 | 20..82 | 130 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25334-PA | 88 | GK25334-PA | 1..88 | 1..88 | 401 | 85.2 | Plus |
Dwil\GK21816-PA | 88 | GK21816-PA | 1..88 | 1..88 | 380 | 79.5 | Plus |
Dwil\GK25366-PA | 85 | GK25366-PA | 4..85 | 7..88 | 321 | 68.3 | Plus |
Dwil\GK21494-PA | 89 | GK21494-PA | 1..86 | 1..85 | 319 | 68.6 | Plus |
Dwil\GK11560-PA | 120 | GK11560-PA | 15..79 | 20..82 | 138 | 40 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15929-PA | 88 | GE15929-PA | 1..88 | 1..88 | 462 | 98.9 | Plus |
Translation from 75 to 341
> SD06593.hyp MSDFENLSGNDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCIGKPSTKL DHATETCLSNCVDRFIDTSLLITQRFAQMLQKRGGGDL*