BDGP Sequence Production Resources |
Search the DGRC for SD06787
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 67 |
Well: | 87 |
Vector: | pOT2 |
Associated Gene/Transcript | CG14642-RA |
Protein status: | SD06787.pep: gold |
Preliminary Size: | 1499 |
Sequenced Size: | 1389 |
Gene | Date | Evidence |
---|---|---|
CG14642 | 2001-01-01 | Release 2 assignment |
CG14642 | 2001-11-09 | Blastp of sequenced clone |
CG14642 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14642 | 2008-04-29 | Release 5.5 accounting |
CG14642 | 2008-08-15 | Release 5.9 accounting |
CG14642 | 2008-12-18 | 5.12 accounting |
1389 bp (1389 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069819
> SD06787.complete CCGCGTTCGCAGAGCCCTTACGATGCTTCGCAATCTGTCCGTGTGTCTGA TATCATTTATCGGGCTCTGGTGCCTGAGCAATACTCACACCCAGCGCCTG CCCCCAGAAGGGCGAATGCGCCCCTTGCAAGACGACTCGATCCGCTCTCC CGTGGACCGCGACATAGTCTTTCCGGAGTTAGACGCGGGACCAGGCAAGC CCGAGGAGAAGATGTGGTTTCACATAACAGACTTTCAATTTGATCGGGTG GAGGGCCCGACCCAGCCCAAGCCCAAGCCCAGACAATACCCCCCGCCGCC GATGCCCGGCCAGCCCTTTCCGCCGCCCCCCGGGGGCTTTAAAAAGAAGG AAAACAAGCAACGCCGCCTCTGCGAGCAAAAATATTCCGAATATGTGGAG CGCATCTTTCCCAATGATACCGCAGTGGCTGCCGATGCCAACGACGCAGA CTTCGATGGTCGGGTCCTGGCCCGGCCCGGCTGCCGTGGGCTTCGAGTCG GACAGAGGGCAAGTGGACTACAAATGTGGCGGCAGCTTGATAAGCGAGAG ATTCGTGCTTACCGCAGCCCACTGTACATCCATATACGAGGCGCCCCCCA AGTGGGTTCGCATCGGGGACCTTGACCTGGCCTCCGAGAAGCGGTCGGTG GAGGCCCAGCTGCTTCGGATTGAGCAAGTGTTCGCGCACCCAAATTACAA AAAAAAGATGTACTATGACGACATAGCCCTACTTAAGCTGGAGAAGGAAG TGGAGTGGGTACCCAACAAGACAGAAGTGCGACCGCTGTTTGCTAACACG ATTCTCTAAGACTGACGGAATACGTTAGACCTGTCCGCCTGTGGGTCTTT CCAGAGCTGCCCACTACGATAGCCTTCGCAATGGGGTACGGCGCAACGAG CTTCGCCAAGCCCATGACGAACCGCCTCACAAATCTTAACCTGACCGTAG TGCCGAACGCTGAGTGCAACGCCGAGCTGCCGCCTCTTGCTGAAACTCCC AGTGGAGTTCTGGAAAGCCAGATCTGCGCCCAGGACTACATTCTCAACAG AGACACTTGCCAGGGGGACTCGGGTGGACCCCTACAACTGAATTTGCCGG GTCGGCGCCGAGGGCATAGAATACACTATCACCTAATTGGCATCACCTCA TACGGCGTGTTCTGCCGCAGTAGTTACCCATCAGTTTACACCAGAGTGTC TTCTTTCTTGGACTGGATCGAACTTACTGTTTGGGCCTGACAGATGCCTA CATCAGCCCAACAACTATTTTCACAGGAGATATTTAAATACATTGCTACA ACATTACACTAGTGAATTGTAAAAATAAATTGTGCTAAACAGTGAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14642-RA | 1413 | CG14642-RA | 70..1413 | 1..1344 | 6720 | 100 | Plus |
CG14642-RB | 1406 | CG14642-RB | 70..549 | 1..480 | 2400 | 100 | Plus |
CG14642-RB | 1406 | CG14642-RB | 841..1286 | 811..1256 | 2230 | 100 | Plus |
CG14642-RB | 1406 | CG14642-RB | 565..840 | 479..754 | 1380 | 100 | Plus |
Gel-RA | 2677 | Gel-RA | 2611..2677 | 1344..1278 | 335 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 66975..67641 | 1256..590 | 3335 | 100 | Minus |
chr3R | 27901430 | chr3R | 68060..68439 | 380..1 | 1900 | 100 | Minus |
chr3R | 27901430 | chr3R | 67699..67810 | 590..479 | 560 | 100 | Minus |
chr3R | 27901430 | chr3R | 67896..67999 | 480..377 | 505 | 99 | Minus |
chr3R | 27901430 | chr3R | 66767..66856 | 1344..1255 | 450 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4241253..4241919 | 1256..590 | 3335 | 100 | Minus |
3R | 32079331 | 3R | 4242338..4242717 | 380..1 | 1900 | 100 | Minus |
3R | 32079331 | 3R | 4241977..4242088 | 590..479 | 560 | 100 | Minus |
3R | 32079331 | 3R | 4242174..4242277 | 480..377 | 505 | 99 | Minus |
3R | 32079331 | 3R | 4241045..4241134 | 1344..1255 | 450 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 3982084..3982750 | 1256..590 | 3335 | 100 | Minus |
3R | 31820162 | 3R | 3983169..3983548 | 380..1 | 1900 | 100 | Minus |
3R | 31820162 | 3R | 3982808..3982919 | 590..479 | 560 | 100 | Minus |
3R | 31820162 | 3R | 3983005..3983108 | 480..377 | 505 | 99 | Minus |
3R | 31820162 | 3R | 3981876..3981965 | 1344..1255 | 450 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 66767..66854 | 1257..1344 | 100 | <- | Minus |
chr3R | 66975..67641 | 590..1256 | 100 | <- | Minus |
chr3R | 67700..67809 | 480..589 | 100 | <- | Minus |
chr3R | 67897..67995 | 381..479 | 100 | <- | Minus |
chr3R | 68060..68439 | 1..380 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14642-RA | 1..603 | 23..625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14642-RA | 1..603 | 23..625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14642-RB | 1..458 | 23..480 | 100 | == | Plus |
CG14642-RB | 750..1179 | 811..1240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14642-RA | 1..603 | 23..625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14642-RB | 1..458 | 23..480 | 100 | == | Plus |
CG14642-RB | 750..1179 | 811..1240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14642-RA | 70..1413 | 1..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14642-RA | 70..1413 | 1..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14642-RA | 1..1344 | 1..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14642-RA | 70..1413 | 1..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14642-RA | 1..1344 | 1..1344 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4241045..4241132 | 1257..1344 | 100 | <- | Minus |
3R | 4241253..4241919 | 590..1256 | 100 | <- | Minus |
3R | 4241978..4242087 | 480..589 | 100 | <- | Minus |
3R | 4242175..4242273 | 381..479 | 100 | <- | Minus |
3R | 4242338..4242717 | 1..380 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4241045..4241132 | 1257..1344 | 100 | <- | Minus |
3R | 4241253..4241919 | 590..1256 | 100 | <- | Minus |
3R | 4241978..4242087 | 480..589 | 100 | <- | Minus |
3R | 4242175..4242273 | 381..479 | 100 | <- | Minus |
3R | 4242338..4242717 | 1..380 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4241045..4241132 | 1257..1344 | 100 | <- | Minus |
3R | 4241253..4241919 | 590..1256 | 100 | <- | Minus |
3R | 4241978..4242087 | 480..589 | 100 | <- | Minus |
3R | 4242175..4242273 | 381..479 | 100 | <- | Minus |
3R | 4242338..4242717 | 1..380 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 66767..66854 | 1257..1344 | 100 | <- | Minus |
arm_3R | 66975..67641 | 590..1256 | 100 | <- | Minus |
arm_3R | 67700..67809 | 480..589 | 100 | <- | Minus |
arm_3R | 67897..67995 | 381..479 | 100 | <- | Minus |
arm_3R | 68060..68439 | 1..380 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 3982084..3982750 | 590..1256 | 100 | <- | Minus |
3R | 3982809..3982918 | 480..589 | 100 | <- | Minus |
3R | 3983006..3983104 | 381..479 | 100 | <- | Minus |
3R | 3983169..3983548 | 1..380 | 100 | Minus | |
3R | 3981876..3981963 | 1257..1344 | 100 | <- | Minus |
Translation from 0 to 624
> SD06787.hyp RVRRALTMLRNLSVCLISFIGLWCLSNTHTQRLPPEGRMRPLQDDSIRSP VDRDIVFPELDAGPGKPEEKMWFHITDFQFDRVEGPTQPKPKPRQYPPPP MPGQPFPPPPGGFKKKENKQRRLCEQKYSEYVERIFPNDTAVAADANDAD FDGRVLARPGCRGLRVGQRASGLQMWRQLDKREIRAYRSPLYIHIRGAPQ VGSHRGP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14642-PA | 200 | CG14642-PA | 1..200 | 8..207 | 1100 | 100 | Plus |
CG14642-PC | 392 | CG14642-PC | 1..153 | 8..160 | 847 | 100 | Plus |
CG14642-PB | 392 | CG14642-PB | 1..153 | 8..160 | 847 | 100 | Plus |
Translation from 22 to 624
> SD06787.pep MLRNLSVCLISFIGLWCLSNTHTQRLPPEGRMRPLQDDSIRSPVDRDIVF PELDAGPGKPEEKMWFHITDFQFDRVEGPTQPKPKPRQYPPPPMPGQPFP PPPGGFKKKENKQRRLCEQKYSEYVERIFPNDTAVAADANDADFDGRVLA RPGCRGLRVGQRASGLQMWRQLDKREIRAYRSPLYIHIRGAPQVGSHRGP *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16825-PA | 391 | GF16825-PA | 14..149 | 9..153 | 210 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11752-PA | 384 | GG11752-PA | 1..145 | 1..153 | 407 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21866-PA | 388 | GH21866-PA | 3..146 | 16..153 | 235 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14642-PA | 200 | CG14642-PA | 1..200 | 1..200 | 1100 | 100 | Plus |
CG14642-PC | 392 | CG14642-PC | 1..153 | 1..153 | 847 | 100 | Plus |
CG14642-PB | 392 | CG14642-PB | 1..153 | 1..153 | 847 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21934-PA | 382 | GI21934-PA | 30..140 | 43..153 | 195 | 44.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12336-PA | 400 | GL12336-PA | 45..157 | 38..153 | 325 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13141-PC | 208 | GA13141-PC | 45..203 | 38..199 | 449 | 64.2 | Plus |
Dpse\GA13141-PA | 397 | GA13141-PA | 45..157 | 38..153 | 331 | 67.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10721-PA | 391 | GM10721-PA | 1..152 | 1..153 | 591 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19695-PA | 464 | GD19695-PA | 73..225 | 1..153 | 608 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14293-PA | 381 | GJ14293-PA | 3..139 | 8..153 | 220 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22652-PA | 386 | GK22652-PA | 40..154 | 36..153 | 276 | 62 | Plus |