SD07269.complete Sequence
3140 bp (3140 high quality bases) assembled on 2002-12-13
GenBank Submission: BT003434
> SD07269.complete
ATCATGGAAAAGTTGGACAAAATAAGGATGAGCCAAAAACTGTCCTGCTG
GCAGCATATTCTGACCACGTTGGGGACGAGTTCCAAGACAGAGCAGGAAT
GGAATACTTTTTTCAAGGGGTTCCTCGAAAGTTGGAGAAAGCCCTACTGT
ATCCAAACCAGCTGCGATCCGAGCATACCGCTGAGAAAGGAGCTCTTGGT
CAGACCGAGGAAAGCCCTGCAAGAAAACCCGCATGGACCGGGGTCCACAC
TTCCAGAGTCCCCTGTTTTCCTGGAACCCATCAATTCCACCGCGCCGCGT
GAACATCCGAGTCCCAGCAAGTCACATTCAACAGGTTCAACAGGTTGTGA
TCCTGGTAATGGAGAAAGATCTCCAAGTGTTTCGAATAAAAATTCTAAGT
ATAAAAATCCTGGTAACTCCAAATATGCTAAAATCTGGAAGCGGAGTAAT
AATCATACGACTTCCATTTTCTCCAAAGCTCAAATTTCCAAGCGCAGAGA
TAAACTCTCAAGTACGAAGAAGCGGCCAGATACATGTGCACCAACTGATG
ATTCGCGCAAAAACCGAGAACCACGTGCTTGTGCTCCCAACAAAAATATT
TTCAAGACCAGAGAGACCAATGCTCCAAACTTGACGAAAAATTCATGTGC
TCTTCCAAATGTTCTTATATTAAGTCCCAACAGTGCGTCTAAAATAACAC
AACGTGGACATTCTGTTGGTCAGACGCAAGATTACAAAGCTTCTCCAGGC
AAAATAATCAAGCGTGTTCCCAGATATAGTTTACAATGCTTAAAGAAAAA
AACCGAGAAAGTACATAATAAAATAATGGACAAGCCTAAGAATAAACAGC
AGCCCCAGACTCCACCGCCATTTCTGCTCAATAACGAGTACACGGAATCA
AGCGACGACTCTGATGACCAACTGCCGCTTTCAGAATTGTCGCAAAAGAT
GAAAAGCAATAAACTGAATACCCTTTTCCTTTCTCGCAATGAAGATTGTA
GTCCTGCTCCTGAGAAAGTAAAGCTAAAAGGAGAACGTCCCGCACAAAAT
AAGAAAGAGCAGCTCACATGGGAGCCATCAATATTAACTAATTTAACCGA
TCTAGGCAAGCAAGTAGCAGAGCCCCTTCGAAAATCAGTTAAAAAATCTG
CCAAACAGCAGAAACCACGAGTTAGAGCCCCTCCTCAGGGAAAAAAAACG
TTACCTCAATTGCAAACAGGTTTAAAGACTCAGGACAAGCAATCAACTCA
CGAAATGATAAGTGAGCAGGCCAAAACCATCTCAGAAGCATCTGGACAGC
AGACATCTCAAGTCCAAAGTAGCTTGTCGCCAAACAATATAAGGAACAAT
AGCGTAAAATTAATAAGCGCCAAAACGTTGATGCCAGCCCAGAGATCACA
AGACTATTCCCCAAACAAAATGCAAGTGGGTCAGCCACTGGGTTTCGCCA
TAGAATTACCTAGTCCCGTGGACGGCAAGGAAGCCAGCGTCGAGATCGAT
ACCCAGCTGGTCCATACCAGCAAGTTCTTAGAGAATATGACAAGACCATC
GACAGTGGAGGTACACAAATTCGATTTAATGGACATCTTTATGGGAGAAA
ATGAAAAGTTGGACTATGAGTACGACGATGATGATGTGCTCTCGGTGGCT
GCCTCCTGGAATGGACTCGACGATGAGAATGTGCCTGAGGACGAACCGAG
GAAGGAAGCGAAAACTGCAGAGCAGTTACCCAAACCCGAGCCTTCCACAG
AAACACTTAAGCCAATCGAAAAAGAAAACGCACAAAAAATGCAAAGCATA
AAATCGTTTCAAATTCCTAAACTTAATGCTAAAAATCTGAAGACACAGCC
CTCCGTGATGCGTTCCATCTACGAGAATGAAGAGTTGGAAAAGAATAAGG
TGTTGGCAAAGCCTGCGCCGCCTTCACTAGTGCATCAACCCTTAGCTGAA
TCCAATCGTAACCAACGGGACGAAGCAACTGCTGCCCGACGGGCCAAAGA
AACATTCCCAGTATTTGCTCCACTATATCGTGTAGCACCAGAATCGGCAG
CTACTCTGGTCAGCGCCAACAGCCAACAGGTTATACCACAAGTATACTTT
TCCACCTCCAACCAAGATGGTGTTAATTGGATCAAAGATGTGTTTGGGAT
AAGGTGCATGCAAAGTGTAGACAACAAATGCATCTCTATTAATTGTGATC
ATACGATGAACAGTTTGGGTGAAGTACAGAAACGACTGATGAGGATGGAC
GAGGACACTTTGCTGAGCCTATACCGACAAACGATACGAAGCTTTTTCCT
GTTTCAGACCTACTACACCTCGTTCGTGGATATCTTCAAATTTCGCAATC
TCTGGCAGTATCTGCTAATCATGCTGGTCGACTGTCGCTTGTACAAAAGC
ATTTCAGCTCCCCTACTGGCACACGTCTATGAAGCTCTCAGTAAGTGCGG
TATGCAGAAAGAGGCAGTGAAAAGGATAATGGAGCATGTGTGGTTGCCAT
GCAAAGCTCACAAATATCGGGATCTGATGCTAACGACTCTAAATATTCTG
TCCAACGCCAACTGGGAGGATTATTGCGATAAGCTAACTCAGCTGGACAA
GGATTATAACTTTGAGATACCCCATAAGAACTTGATTACCATACTTAAAT
CCTCCGTAGACTGCTCAGATAAATTTGCAAACGCCCTTAAGTTGATCACC
CTCCATCCAAATTCTATTCGTACCAACGAAACTATTATGTCGATTTTAAG
CAACGCATCGAAAAGCTACAGCTACATGCATAATGAAAGTGCGAGCGCAA
GCCAGGGGCCGCCAGGAGCGGCCTCGTTTCTTGCACCACCTGCTGCTATT
CAGCCTCCACACACCACAGTTCCTAATTTTGGATATTTGCCAAACCCTAG
CTTTCATTATTCCAATGAATATGCGATCAATATACATAATTTTGATTAAG
CAAATGAAAATGAATGAAAAGTATCTAACATATACTTGACATATATCATA
ATCTCTTCATTATTGATGCACATAATTGAATAAATTAAGTTATCAAATTA
TTGTTCCTATTTGATTATTACAAATATCAATAAAGTAAATTTTGCGTTAT
ACTTTCTATTTAACAAAAAAAAAAAAAAAAAAAAAAAAAA
SD07269.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 18:28:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
del-RA | 3315 | del-RA | 202..3314 | 1..3113 | 15520 | 99.9 | Plus |
del.a | 3229 | del.a | 593..3228 | 478..3113 | 13135 | 99.8 | Plus |
del.b | 3306 | del.b | 1555..3305 | 1363..3113 | 8725 | 99.8 | Plus |
del.b | 3306 | del.b | 202..1558 | 1..1357 | 6755 | 99.8 | Plus |
del.a | 3229 | del.a | 182..593 | 1..412 | 2060 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:45:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 21143639..21145389 | 3113..1363 | 8725 | 99.9 | Minus |
chr2L | 23010047 | chr2L | 21145438..21146640 | 1368..166 | 5985 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 21146704..21146869 | 166..1 | 830 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:50:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:45:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21145135..21146885 | 3113..1363 | 8725 | 99.9 | Minus |
2L | 23513712 | 2L | 21146934..21148136 | 1368..166 | 5985 | 99.8 | Minus |
2L | 23513712 | 2L | 21148200..21148365 | 166..1 | 830 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:05:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21145135..21146885 | 3113..1363 | 8725 | 99.8 | Minus |
2L | 23513712 | 2L | 21146934..21148136 | 1368..166 | 5985 | 99.8 | Minus |
2L | 23513712 | 2L | 21148200..21148365 | 166..1 | 830 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 19:45:55 has no hits.
SD07269.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:46:59 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 21143638..21145389 | 1363..3114 | 99 | <- | Minus |
chr2L | 21145444..21146640 | 166..1362 | 99 | <- | Minus |
chr2L | 21146705..21146869 | 1..165 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:02:59 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
del-RA | 1..2946 | 4..2949 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:59:23 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
del-RA | 1..2946 | 4..2949 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:14:34 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
del-RA | 1..2946 | 4..2949 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:49:59 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
del-RA | 1..2946 | 4..2949 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:07:00 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
del-RA | 1..2946 | 4..2949 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:16:12 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
del-RA | 182..3294 | 1..3114 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:59:22 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
del-RA | 182..3294 | 1..3114 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:14:34 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
del-RA | 53..3163 | 1..3111 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:49:59 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
del-RA | 182..3294 | 1..3114 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:07:00 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
del-RA | 53..3163 | 1..3111 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:46:59 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21145134..21146885 | 1363..3114 | 99 | <- | Minus |
2L | 21146940..21148136 | 166..1362 | 99 | <- | Minus |
2L | 21148201..21148365 | 1..165 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:46:59 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21145134..21146885 | 1363..3114 | 99 | <- | Minus |
2L | 21146940..21148136 | 166..1362 | 99 | <- | Minus |
2L | 21148201..21148365 | 1..165 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:46:59 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21145134..21146885 | 1363..3114 | 99 | <- | Minus |
2L | 21146940..21148136 | 166..1362 | 99 | <- | Minus |
2L | 21148201..21148365 | 1..165 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:14:34 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21145134..21146885 | 1363..3114 | 99 | <- | Minus |
arm_2L | 21146940..21148136 | 166..1362 | 99 | <- | Minus |
arm_2L | 21148201..21148365 | 1..165 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:21:40 Download gff for
SD07269.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21145134..21146885 | 1363..3114 | 99 | <- | Minus |
2L | 21146940..21148136 | 166..1362 | 99 | <- | Minus |
2L | 21148201..21148365 | 1..165 | 100 | | Minus |
SD07269.hyp Sequence
Translation from 0 to 2948
> SD07269.hyp
IMEKLDKIRMSQKLSCWQHILTTLGTSSKTEQEWNTFFKGFLESWRKPYC
IQTSCDPSIPLRKELLVRPRKALQENPHGPGSTLPESPVFLEPINSTAPR
EHPSPSKSHSTGSTGCDPGNGERSPSVSNKNSKYKNPGNSKYAKIWKRSN
NHTTSIFSKAQISKRRDKLSSTKKRPDTCAPTDDSRKNREPRACAPNKNI
FKTRETNAPNLTKNSCALPNVLILSPNSASKITQRGHSVGQTQDYKASPG
KIIKRVPRYSLQCLKKKTEKVHNKIMDKPKNKQQPQTPPPFLLNNEYTES
SDDSDDQLPLSELSQKMKSNKLNTLFLSRNEDCSPAPEKVKLKGERPAQN
KKEQLTWEPSILTNLTDLGKQVAEPLRKSVKKSAKQQKPRVRAPPQGKKT
LPQLQTGLKTQDKQSTHEMISEQAKTISEASGQQTSQVQSSLSPNNIRNN
SVKLISAKTLMPAQRSQDYSPNKMQVGQPLGFAIELPSPVDGKEASVEID
TQLVHTSKFLENMTRPSTVEVHKFDLMDIFMGENEKLDYEYDDDDVLSVA
ASWNGLDDENVPEDEPRKEAKTAEQLPKPEPSTETLKPIEKENAQKMQSI
KSFQIPKLNAKNLKTQPSVMRSIYENEELEKNKVLAKPAPPSLVHQPLAE
SNRNQRDEATAARRAKETFPVFAPLYRVAPESAATLVSANSQQVIPQVYF
STSNQDGVNWIKDVFGIRCMQSVDNKCISINCDHTMNSLGEVQKRLMRMD
EDTLLSLYRQTIRSFFLFQTYYTSFVDIFKFRNLWQYLLIMLVDCRLYKS
ISAPLLAHVYEALSKCGMQKEAVKRIMEHVWLPCKAHKYRDLMLTTLNIL
SNANWEDYCDKLTQLDKDYNFEIPHKNLITILKSSVDCSDKFANALKLIT
LHPNSIRTNETIMSILSNASKSYSYMHNESASASQGPPGAASFLAPPAAI
QPPHTTVPNFGYLPNPSFHYSNEYAINIHNFD*
SD07269.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:42:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
del-PC | 981 | CG9252-PC | 1..981 | 2..982 | 5137 | 100 | Plus |
del-PA | 981 | CG9252-PA | 1..981 | 2..982 | 5137 | 100 | Plus |
del-PB | 978 | CG9252-PB | 1..978 | 2..982 | 5110 | 99.7 | Plus |
SD07269.pep Sequence
Translation from 3 to 2948
> SD07269.pep
MEKLDKIRMSQKLSCWQHILTTLGTSSKTEQEWNTFFKGFLESWRKPYCI
QTSCDPSIPLRKELLVRPRKALQENPHGPGSTLPESPVFLEPINSTAPRE
HPSPSKSHSTGSTGCDPGNGERSPSVSNKNSKYKNPGNSKYAKIWKRSNN
HTTSIFSKAQISKRRDKLSSTKKRPDTCAPTDDSRKNREPRACAPNKNIF
KTRETNAPNLTKNSCALPNVLILSPNSASKITQRGHSVGQTQDYKASPGK
IIKRVPRYSLQCLKKKTEKVHNKIMDKPKNKQQPQTPPPFLLNNEYTESS
DDSDDQLPLSELSQKMKSNKLNTLFLSRNEDCSPAPEKVKLKGERPAQNK
KEQLTWEPSILTNLTDLGKQVAEPLRKSVKKSAKQQKPRVRAPPQGKKTL
PQLQTGLKTQDKQSTHEMISEQAKTISEASGQQTSQVQSSLSPNNIRNNS
VKLISAKTLMPAQRSQDYSPNKMQVGQPLGFAIELPSPVDGKEASVEIDT
QLVHTSKFLENMTRPSTVEVHKFDLMDIFMGENEKLDYEYDDDDVLSVAA
SWNGLDDENVPEDEPRKEAKTAEQLPKPEPSTETLKPIEKENAQKMQSIK
SFQIPKLNAKNLKTQPSVMRSIYENEELEKNKVLAKPAPPSLVHQPLAES
NRNQRDEATAARRAKETFPVFAPLYRVAPESAATLVSANSQQVIPQVYFS
TSNQDGVNWIKDVFGIRCMQSVDNKCISINCDHTMNSLGEVQKRLMRMDE
DTLLSLYRQTIRSFFLFQTYYTSFVDIFKFRNLWQYLLIMLVDCRLYKSI
SAPLLAHVYEALSKCGMQKEAVKRIMEHVWLPCKAHKYRDLMLTTLNILS
NANWEDYCDKLTQLDKDYNFEIPHKNLITILKSSVDCSDKFANALKLITL
HPNSIRTNETIMSILSNASKSYSYMHNESASASQGPPGAASFLAPPAAIQ
PPHTTVPNFGYLPNPSFHYSNEYAINIHNFD*
SD07269.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:43:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF15157-PA | 1370 | GF15157-PA | 666..985 | 578..901 | 634 | 38.8 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:43:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG21522-PA | 1030 | GG21522-PA | 1..1030 | 7..981 | 2709 | 58.1 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:43:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH13221-PA | 634 | GH13221-PA | 252..584 | 536..886 | 349 | 28.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
del-PC | 981 | CG9252-PC | 1..981 | 1..981 | 5137 | 100 | Plus |
del-PA | 981 | CG9252-PA | 1..981 | 1..981 | 5137 | 100 | Plus |
del-PB | 978 | CG9252-PB | 1..978 | 1..981 | 5110 | 99.7 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:43:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA25473-PA | 661 | GA25473-PA | 400..621 | 653..884 | 433 | 36.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:43:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM23276-PA | 976 | GM23276-PA | 1..976 | 1..981 | 3882 | 78.7 | Plus |
Dsec\GM13366-PA | 115 | GM13366-PA | 1..106 | 1..107 | 267 | 54.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:43:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21652-PA | 962 | GD21652-PA | 1..962 | 1..981 | 3791 | 77.8 | Plus |
Dsim\GD15723-PA | 113 | GD15723-PA | 1..104 | 1..107 | 254 | 54.1 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:43:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ16287-PA | 1189 | GJ16287-PA | 696..1189 | 497..980 | 360 | 27.8 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:43:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK13777-PA | 842 | GK13777-PA | 452..784 | 545..900 | 528 | 37.3 | Plus |
Dwil\GK18873-PA | 372 | GK18873-PA | 28..267 | 634..885 | 459 | 41.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:43:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE13002-PA | 1041 | GE13002-PA | 4..1039 | 1..976 | 2776 | 59.5 | Plus |