BDGP Sequence Production Resources |
Search the DGRC for SD07421
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 74 |
Well: | 21 |
Vector: | pOT2 |
Associated Gene/Transcript | VhaSFD-RA |
Protein status: | SD07421.pep: gold |
Preliminary Size: | 2209 |
Sequenced Size: | 2157 |
Gene | Date | Evidence |
---|---|---|
CG17332 | 2001-01-01 | Release 2 assignment |
CG17332 | 2001-07-04 | Blastp of sequenced clone |
CG17332 | 2003-01-01 | Sim4 clustering to Release 3 |
VhaSFD | 2008-04-29 | Release 5.5 accounting |
VhaSFD | 2008-08-15 | Release 5.9 accounting |
VhaSFD | 2008-12-18 | 5.12 accounting |
2157 bp (2157 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052122
> SD07421.complete CTCGTGCCGGTCAGCTGAATTTCGGTGCTGTGTCGCAGTAGTGTGAAAAA CACTCGGTTGTATTTGATAGATTTTCATAAATTCTGTGCTTGAATTTGTG TGTGCCGAGCGTCGTCTCAAGAAAGCCCTCAAAATGACTACCGCCTTGTA TTTGCCCGAGGAGAACATTGATATGATTGCTGCCACCTCGGTGCTGCAGC AGCAGGCGGCGGACATCCGCACCAGGACGATCAACTGGGCTTCGTACATG CAGTCGCAGATGATCAGCGAGGAGGACTACAAGGCAATCAGCGCGTTGGA CAAGTCACGTGCCAGCTTCTTGGCCCAGAACTCCAGCCAGGTGGTGAAGA CGCTGCTTAATCTGGTTTCGCATCTGTCGAAGGACTCCACCATTCAGTAC ATCCTTGTGCTGCTCGACGATTTGCTGCAGGAGGATCGCTCCCGTGTGGA TCTATTCCATGACACAGCCGGCAAGCTGAAGCAGTGCATCTGGGGTCCGT TCCTGAACCTGCTGAACCGTCAGGATGGCTTTATTGTCAACATGTCGTCG CGCATCCTGGCCAAATTCGCCTGCTGGGGCCATGAGACCATGCCCAAGTC CGACCTGAACTTCTATCTGCAGTTCCTGAAGGATCAGCTGGCCAGCAATA ACAACGAATACATCCAGTCGGTGGCCCGGTGCCTGCAGATGATGCTCCGT GTGGATGAGTATCGATTTGCCTTTGTGGGAGTCGACGGAATCAGCACTCT GATCCGTATCTTGTCGACCCGTGTCAACTTCCAGGTGCAATACCAGTTGA TCTTTTGCCTGTGGGTGCTGACCTTCAATCCCCTGCTGGCCGCCAAGATG AATAAGTTCAGCGTGATCCCCATCCTGGCTGATATCCTCAGCGATTGTGC CAAGGAGAAGGTGACACGCATTATCCTCGCGGTCTTCCGCAATCTGATCG AGAAGCCGGAGGATTCATCGGTGGCCAAGGACCATTGCATCGCCATGGTC CAGTGCAAGGTGCTGAAGCAGCTATCCATCCTGGAGCAGCGTCGCTTCGA CGACGAGGACATTACCGCCGACGTAGAGTACCTGAGCGAGAAGCTCCAGA ATTCGGTGCAAGACTTGAGCTCCTTTGATGAGTACGCCACAGAGGTGCGC AGCGGTCGCTTGGAATGGTCGCCTGTGCACAAGTCGGCCAAGTTCTGGCG CGAGAATGCCCAGCGCCTAAACGAAAAGAACTACGAGTTGCTGCGCATCC TCGTCCACCTCCTGGAAACCTCAAAAGATGCCATCATCCTTTCCGTCGCC TGCTTCGACATCGGGGAGTATGTGCGCCACTATCCCCGCGGCAAGCACGT CTTGGAACAACTCGGAGGCAAGCAGATCGTGATGCAGCATCTTGGCCACG AGGATCCCAATGTGCGATACGAAGCCCTGCTGGCTGTGCAAAAGCTGATG GTACACAATTGGGAATACCTGGGCAAGCAGCTGGAGAAGGAAAACGAGAA CCAGAAACAAGGTGCCGCCCCCATCGCTGGCAAGGCCTAGGTGGTCTAAT CAACAAGTCATCCATGCACAGGCACACAACAAATATTTTAGCCAGGCCGC CAGCCTGAAACCTTAACTAACAATAAGAGTCGTAGGGGGATCTATATCTC CAGCCTGATCCTCCGCTTCTCCATCACACTTGCAATGATGTTTGTTCTTG CTATTTTTAAGCGCATGTTTGTTCCCCGTTTAAACTAAGTTTTTGTTAGC CCATACCTCCGTGTACGCCCATTTACACCCTCAGTTCTTAGAAAGTATTG AGAGAAAAATTCGATTTTTTGTTGGCATTCCAAAAAGCAATTCACTGTAA TGGCAGAACAAATACAAGCAACTATCCTCTACAAATTGTTCCATTCAATT CGATTGTTTATATATTTTGTTGTTATTATTATTTGTGTTCTTAATTTTAT GAGTGCGCCGCTGTACAGAGTTTTTCTAAACCAGATGATATGCGCTTCTT ACGTTTATATAGTCGCATCTGCGCATCCACATCTAAGCAAAAAACGAAAC TAAAGAAAACAAAAAATATATTGTATAAACCTATCAAGTATTTCTTTCAT TAAAAAAAAAATAAATCAAATAAGCATAATTAAAACGAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
VhaSFD-RA | 2307 | VhaSFD-RA | 96..1856 | 10..1770 | 8790 | 99.9 | Plus |
VhaSFD.b | 2351 | VhaSFD.b | 36..1488 | 10..1462 | 7265 | 100 | Plus |
VhaSFD-RB | 2469 | VhaSFD-RB | 898..2018 | 650..1770 | 5590 | 99.9 | Plus |
VhaSFD-RB | 2469 | VhaSFD-RB | 36..675 | 10..649 | 3200 | 100 | Plus |
VhaSFD.b | 2351 | VhaSFD.b | 1894..2262 | 1774..2142 | 1830 | 99.7 | Plus |
VhaSFD-RA | 2307 | VhaSFD-RA | 1850..2218 | 1774..2142 | 1830 | 99.7 | Plus |
VhaSFD-RB | 2469 | VhaSFD-RB | 2012..2380 | 1774..2142 | 1830 | 99.7 | Plus |
VhaSFD.b | 2351 | VhaSFD.b | 1591..1900 | 1461..1770 | 1535 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 16721964..16722630 | 2137..1461 | 3185 | 98.4 | Minus |
chr2L | 23010047 | chr2L | 16722964..16723528 | 1347..783 | 2825 | 100 | Minus |
chr2L | 23010047 | chr2L | 16725751..16726230 | 649..170 | 2400 | 100 | Minus |
chr2L | 23010047 | chr2L | 16726371..16726531 | 170..10 | 805 | 100 | Minus |
chr2L | 23010047 | chr2L | 16723588..16723725 | 787..650 | 690 | 100 | Minus |
chr2L | 23010047 | chr2L | 16722789..16722903 | 1462..1348 | 575 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16723227..16723898 | 2142..1461 | 3210 | 98.4 | Minus |
2L | 23513712 | 2L | 16724232..16724796 | 1347..783 | 2825 | 100 | Minus |
2L | 23513712 | 2L | 16727010..16727489 | 649..170 | 2400 | 100 | Minus |
2L | 23513712 | 2L | 16727630..16727790 | 170..10 | 805 | 100 | Minus |
2L | 23513712 | 2L | 16724856..16724993 | 787..650 | 690 | 100 | Minus |
2L | 23513712 | 2L | 16724057..16724171 | 1462..1348 | 575 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 16724232..16724796 | 1347..783 | 2825 | 100 | Minus |
2L | 23513712 | 2L | 16727010..16727489 | 649..170 | 2400 | 100 | Minus |
2L | 23513712 | 2L | 16723227..16723595 | 2142..1774 | 1830 | 99.7 | Minus |
2L | 23513712 | 2L | 16723589..16723898 | 1770..1461 | 1535 | 99.6 | Minus |
2L | 23513712 | 2L | 16727630..16727790 | 170..10 | 805 | 100 | Minus |
2L | 23513712 | 2L | 16724856..16724993 | 787..650 | 690 | 100 | Minus |
2L | 23513712 | 2L | 16724057..16724171 | 1462..1348 | 575 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1189..1418 | 1898..2135 | 144 | 57.4 | Plus |
Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 6592..6644 | 1950..1899 | 118 | 71.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 16726371..16726534 | 7..170 | 99 | Minus | |
chr2L | 16721964..16722629 | 1462..2137 | 98 | <- | Minus |
chr2L | 16722790..16722903 | 1348..1461 | 100 | <- | Minus |
chr2L | 16722964..16723526 | 785..1347 | 100 | <- | Minus |
chr2L | 16723591..16723725 | 650..784 | 100 | <- | Minus |
chr2L | 16725751..16726229 | 171..649 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaSFD-RA | 1..1407 | 134..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaSFD-RA | 1..1407 | 134..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaSFD-RA | 1..1407 | 134..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaSFD-RA | 1..1407 | 134..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaSFD-RA | 1..1407 | 134..1540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaSFD-RA | 33..2153 | 7..2137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaSFD-RA | 33..2153 | 7..2137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaSFD-RA | 34..2154 | 7..2137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaSFD-RA | 33..2153 | 7..2137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaSFD-RA | 34..2154 | 7..2137 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16727630..16727793 | 7..170 | 99 | Minus | |
2L | 16723232..16723897 | 1462..2137 | 98 | <- | Minus |
2L | 16724058..16724171 | 1348..1461 | 100 | <- | Minus |
2L | 16724232..16724794 | 785..1347 | 100 | <- | Minus |
2L | 16724859..16724993 | 650..784 | 100 | <- | Minus |
2L | 16727010..16727488 | 171..649 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16727630..16727793 | 7..170 | 99 | Minus | |
2L | 16723232..16723897 | 1462..2137 | 98 | <- | Minus |
2L | 16724058..16724171 | 1348..1461 | 100 | <- | Minus |
2L | 16724232..16724794 | 785..1347 | 100 | <- | Minus |
2L | 16724859..16724993 | 650..784 | 100 | <- | Minus |
2L | 16727010..16727488 | 171..649 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16727630..16727793 | 7..170 | 99 | Minus | |
2L | 16723232..16723897 | 1462..2137 | 98 | <- | Minus |
2L | 16724058..16724171 | 1348..1461 | 100 | <- | Minus |
2L | 16724232..16724794 | 785..1347 | 100 | <- | Minus |
2L | 16724859..16724993 | 650..784 | 100 | <- | Minus |
2L | 16727010..16727488 | 171..649 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 16724058..16724171 | 1348..1461 | 100 | <- | Minus |
arm_2L | 16724859..16724993 | 650..784 | 100 | <- | Minus |
arm_2L | 16723232..16723897 | 1462..2137 | 98 | <- | Minus |
arm_2L | 16724232..16724794 | 785..1347 | 100 | <- | Minus |
arm_2L | 16727010..16727488 | 171..649 | 100 | <- | Minus |
arm_2L | 16727630..16727793 | 7..170 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 16723232..16723897 | 1462..2137 | 98 | <- | Minus |
2L | 16724058..16724171 | 1348..1461 | 100 | <- | Minus |
2L | 16724232..16724794 | 785..1347 | 100 | <- | Minus |
2L | 16724859..16724993 | 650..784 | 100 | <- | Minus |
2L | 16727010..16727488 | 171..649 | 100 | <- | Minus |
2L | 16727630..16727793 | 7..170 | 99 | Minus |
Translation from 133 to 1539
> SD07421.pep MTTALYLPEENIDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYK AISALDKSRASFLAQNSSQVVKTLLNLVSHLSKDSTIQYILVLLDDLLQE DRSRVDLFHDTAGKLKQCIWGPFLNLLNRQDGFIVNMSSRILAKFACWGH ETMPKSDLNFYLQFLKDQLASNNNEYIQSVARCLQMMLRVDEYRFAFVGV DGISTLIRILSTRVNFQVQYQLIFCLWVLTFNPLLAAKMNKFSVIPILAD ILSDCAKEKVTRIILAVFRNLIEKPEDSSVAKDHCIAMVQCKVLKQLSIL EQRRFDDEDITADVEYLSEKLQNSVQDLSSFDEYATEVRSGRLEWSPVHK SAKFWRENAQRLNEKNYELLRILVHLLETSKDAIILSVACFDIGEYVRHY PRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMVHNWEYLGKQL EKENENQKQGAAPIAGKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24362-PA | 545 | GF24362-PA | 250..545 | 173..468 | 1594 | 99.7 | Plus |
Dana\GF24362-PA | 545 | GF24362-PA | 1..182 | 1..182 | 900 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20115-PA | 545 | GG20115-PA | 250..545 | 173..468 | 1537 | 96.3 | Plus |
Dere\GG20115-PA | 545 | GG20115-PA | 1..182 | 1..182 | 917 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10362-PA | 546 | GH10362-PA | 227..546 | 149..468 | 1577 | 91.9 | Plus |
Dgri\GH10362-PA | 546 | GH10362-PA | 1..204 | 1..204 | 856 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
VhaSFD-PE | 468 | CG17332-PE | 1..468 | 1..468 | 2390 | 100 | Plus |
VhaSFD-PA | 468 | CG17332-PA | 1..468 | 1..468 | 2390 | 100 | Plus |
VhaSFD-PD | 441 | CG17332-PD | 1..440 | 1..440 | 2238 | 100 | Plus |
VhaSFD-PB | 542 | CG17332-PB | 120..542 | 35..468 | 1520 | 73 | Plus |
VhaSFD-PB | 542 | CG17332-PB | 1..182 | 1..182 | 887 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21354-PA | 545 | GI21354-PA | 250..545 | 173..468 | 1587 | 99.3 | Plus |
Dmoj\GI21354-PA | 545 | GI21354-PA | 1..182 | 1..182 | 874 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19340-PA | 548 | GL19340-PA | 253..548 | 173..468 | 1585 | 99.3 | Plus |
Dper\GL19340-PA | 548 | GL19340-PA | 1..181 | 1..181 | 918 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14464-PA | 548 | GA14464-PA | 253..548 | 173..468 | 1585 | 99.3 | Plus |
Dpse\GA14464-PA | 548 | GA14464-PA | 1..181 | 1..181 | 918 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17165-PA | 545 | GM17165-PA | 250..545 | 173..468 | 1597 | 100 | Plus |
Dsec\GM17165-PA | 545 | GM17165-PA | 1..182 | 1..182 | 914 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21903-PA | 545 | GD21903-PA | 250..545 | 173..468 | 1596 | 100 | Plus |
Dsim\GD21903-PA | 545 | GD21903-PA | 1..182 | 1..182 | 914 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11146-PA | 541 | GJ11146-PA | 246..541 | 173..468 | 1570 | 98 | Plus |
Dvir\GJ11146-PA | 541 | GJ11146-PA | 1..181 | 1..181 | 893 | 90.6 | Plus |
Translation from 133 to 1539
> SD07421.hyp MTTALYLPEENIDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYK AISALDKSRASFLAQNSSQVVKTLLNLVSHLSKDSTIQYILVLLDDLLQE DRSRVDLFHDTAGKLKQCIWGPFLNLLNRQDGFIVNMSSRILAKFACWGH ETMPKSDLNFYLQFLKDQLASNNNEYIQSVARCLQMMLRVDEYRFAFVGV DGISTLIRILSTRVNFQVQYQLIFCLWVLTFNPLLAAKMNKFSVIPILAD ILSDCAKEKVTRIILAVFRNLIEKPEDSSVAKDHCIAMVQCKVLKQLSIL EQRRFDDEDITADVEYLSEKLQNSVQDLSSFDEYATEVRSGRLEWSPVHK SAKFWRENAQRLNEKNYELLRILVHLLETSKDAIILSVACFDIGEYVRHY PRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMVHNWEYLGKQL EKENENQKQGAAPIAGKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
VhaSFD-PE | 468 | CG17332-PE | 1..468 | 1..468 | 2390 | 100 | Plus |
VhaSFD-PA | 468 | CG17332-PA | 1..468 | 1..468 | 2390 | 100 | Plus |
VhaSFD-PD | 441 | CG17332-PD | 1..440 | 1..440 | 2238 | 100 | Plus |
VhaSFD-PB | 542 | CG17332-PB | 120..542 | 35..468 | 1520 | 73 | Plus |
VhaSFD-PB | 542 | CG17332-PB | 1..182 | 1..182 | 887 | 96.2 | Plus |