BDGP Sequence Production Resources |
Search the DGRC for SD07518
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 75 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | Spp-RA |
Protein status: | SD07518.pep: gold |
Preliminary Size: | 1865 |
Sequenced Size: | 1771 |
Gene | Date | Evidence |
---|---|---|
CG11840 | 2001-01-01 | Release 2 assignment |
CG11840 | 2001-12-12 | Blastp of sequenced clone |
CG11840 | 2003-01-01 | Sim4 clustering to Release 3 |
Spp | 2008-04-29 | Release 5.5 accounting |
Spp | 2008-08-15 | Release 5.9 accounting |
Spp | 2008-12-18 | 5.12 accounting |
1771 bp (1771 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070713
> SD07518.complete TGACGTGTGCTGCTGCGTGTCATTTCGCTTTTCACCCCCGCAAGCCGGCG ATTTTCAGGAACGGATTGGATTGGACAGCACAGCATGGCGGAGGAAGTCA TCGGAACCGTTAAGGAGGTGCTGAAGGGCATCATCGAGAATGTGAACGCG CCGAAGAACGAGTCGGCGCCGGGCGAGAAGAAGCCCTCGACTCCGGAGGG CATGGCGGTGGCCTACAGCAGCCTGGTGGTGATGGCCATGCTGCCCATCA TCTTCGGCTCCATCCGCTCCGTGAAGCTGCACAAGCTGAAGAAGTCAACG GGCGAGAAGGCGGACACGATGACCAAGAAGGACGCCATGTACTTCCCGCT GATCGCGTCGGCAGCCCTCTTCGGGCTGTACCTGTTCTTCAAGATCTTCC AGAAGGTGCACATCAACTACCTGCTCACCGGCTACTTCTTCGTGCTGGGA GTTATTGCTCTGGCGCACCTGCTCAGTCCGGTGATCAACTCGCTGATGCC CGCCGCCGTGCCGAAGGTGCCCTTCCACATCCTGTTCACTAAGGGGGAGG GCAAGCACAAGGAAGACATCGTTAACTACAAGTTCTCCACGCACGACATT GTCTGCCTGGTGATCTCCTCGGCGATCGGAGTGTGGTACCTGCTCAAGAA GCACTGGATCGCCAACAATCTGTTCGGTCTGGCCTTCGCCATCAACGGCG TGGAGATGCTGCACCTGAACAACTTCGTCACGGGCGTCATCTTGCTGAGC GGCCTGTTCTTCTACGACATCTTCTGGGTATTCGGCACCAACGTGATGGT CACCGTGGCCAAGAGCTTCGAGGCGCCCATCAAGCTAGTGTTCCCCCAGG ACCTGATCGAGAACGGCCTGAACGCCTCGAACTTCGCAATGCTGGGACTA GGCGACATCGTTATTCCGGGCATCTTCATCGCTCTGCTGCTGCGCTTCGA CGACAGCAAGAAGCGCAAGACGCGCATCTACTTCTACTCCACGCTGATTG CCTACTTCCTTGGCCTGCTGGCCACCATCTTCGTGATGCATGTGTTCAAG CATGCGCAGCCGGCTCTGCTCTACCTGGTGCCAGCCTGCATGGGCACGCC CCTCCTGGTGGCCCTCATCCGCGGCGAGCTGAAGGTGCTCTTTGCCTATG AAGATCATCCCGAGGAGAAGCCCGAAAAGAAGGAGAAGAAGGAGAAGGAC GAGGGCGTCAGCTCGTCCGGCAGCAAAAAGAAGGAGTCGAAAAAGGGCAA GTAGAGCCGGGAGGACGCAACATCCGAACAACATCCCCACTCGTTCCATC GTAAATGTCTTCTGCAGCTAGCCAAGCTCCCTTTCGTTTCGATATGGCTT CTCCATCTACCGCAGTCCATAGCTCATATGGACTAACACCGCTACAAAAG ACGATTCACTTACTGAGTTAGTTATGTACGTTCCTTGGCCAGGCACAACA ATCTTATTTAGTTCGGTTAGGTTACAATTGTAGAAAATGTTCCCTCGACT TTTTTACCGCAATCAATTTAAATATGTATTTCAAATATTTCTGTGGCTCC GCACAGGAGGCTTATATGTTTAAGAACAGTTTAGATACAAATATATTCCA ATTTTTGTAAACAGTGCAATTTTGACTACGAATTCTACATTGCATTTCTT AAAACTAATGCAGTAATTTGTGTAAACAGTAATGCGAATAAATTTTAATT CTAACGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 543420..544272 | 1145..293 | 4250 | 99.9 | Minus |
chr2L | 23010047 | chr2L | 542790..543353 | 1709..1146 | 2805 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 544337..544630 | 294..1 | 1470 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 544337..544630 | 1..294 | 100 | Minus | |
chr2L | 542790..543353 | 1146..1709 | 99 | <- | Minus |
chr2L | 543420..544270 | 295..1145 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spp-RA | 1..1170 | 85..1254 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spp-RA | 1..1170 | 85..1254 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spp-RA | 1..1170 | 85..1254 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spp-RA | 1..1170 | 85..1254 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spp-RA | 1..1170 | 85..1254 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spp-RA | 2..1710 | 1..1709 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spp-RA | 2..1710 | 1..1709 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spp-RA | 28..1736 | 1..1709 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spp-RA | 2..1710 | 1..1709 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spp-RA | 28..1736 | 1..1709 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 542786..543349 | 1146..1709 | 100 | <- | Minus |
2L | 543416..544266 | 295..1145 | 99 | <- | Minus |
2L | 544333..544626 | 1..294 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 542786..543349 | 1146..1709 | 100 | <- | Minus |
2L | 543416..544266 | 295..1145 | 99 | <- | Minus |
2L | 544333..544626 | 1..294 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 542786..543349 | 1146..1709 | 100 | <- | Minus |
2L | 543416..544266 | 295..1145 | 99 | <- | Minus |
2L | 544333..544626 | 1..294 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 542786..543349 | 1146..1709 | 100 | <- | Minus |
arm_2L | 543416..544266 | 295..1145 | 99 | <- | Minus |
arm_2L | 544333..544626 | 1..294 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 542786..543349 | 1146..1709 | 100 | <- | Minus |
2L | 543416..544266 | 295..1145 | 99 | <- | Minus |
2L | 544333..544626 | 1..294 | 100 | Minus |
Translation from 84 to 1253
> SD07518.pep MAEEVIGTVKEVLKGIIENVNAPKNESAPGEKKPSTPEGMAVAYSSLVVM AMLPIIFGSIRSVKLHKLKKSTGEKADTMTKKDAMYFPLIASAALFGLYL FFKIFQKVHINYLLTGYFFVLGVIALAHLLSPVINSLMPAAVPKVPFHIL FTKGEGKHKEDIVNYKFSTHDIVCLVISSAIGVWYLLKKHWIANNLFGLA FAINGVEMLHLNNFVTGVILLSGLFFYDIFWVFGTNVMVTVAKSFEAPIK LVFPQDLIENGLNASNFAMLGLGDIVIPGIFIALLLRFDDSKKRKTRIYF YSTLIAYFLGLLATIFVMHVFKHAQPALLYLVPACMGTPLLVALIRGELK VLFAYEDHPEEKPEKKEKKEKDEGVSSSGSKKKESKKGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24718-PA | 389 | GF24718-PA | 1..358 | 1..358 | 1809 | 96.4 | Plus |
Dana\GF16778-PA | 435 | GF16778-PA | 67..432 | 46..366 | 346 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24644-PA | 389 | GG24644-PA | 1..389 | 1..389 | 1991 | 98.5 | Plus |
Dere\GG11430-PA | 417 | GG11430-PA | 49..414 | 46..366 | 336 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10510-PA | 390 | GH10510-PA | 1..359 | 1..358 | 1747 | 92.5 | Plus |
Dgri\GH22306-PA | 424 | GH22306-PA | 56..421 | 46..366 | 338 | 28.1 | Plus |
Dgri\GH22226-PA | 92 | GH22226-PA | 1..75 | 1..74 | 276 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Spp-PA | 389 | CG11840-PA | 1..389 | 1..389 | 1983 | 100 | Plus |
SppL-PF | 417 | CG17370-PF | 49..414 | 46..366 | 335 | 27.9 | Plus |
SppL-PC | 417 | CG17370-PC | 49..414 | 46..366 | 335 | 27.9 | Plus |
SppL-PB | 417 | CG17370-PB | 49..414 | 46..366 | 335 | 27.9 | Plus |
SppL-PA | 417 | CG17370-PA | 49..414 | 46..366 | 335 | 27.9 | Plus |
SppL-PE | 422 | CG17370-PE | 49..419 | 46..366 | 329 | 27.5 | Plus |
SppL-PD | 422 | CG17370-PD | 49..419 | 46..366 | 329 | 27.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18028-PA | 391 | GI18028-PA | 1..359 | 1..358 | 1741 | 91.1 | Plus |
Dmoj\GI22975-PA | 422 | GI22975-PA | 54..419 | 46..366 | 338 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19257-PA | 391 | GL19257-PA | 1..360 | 1..358 | 1718 | 91.9 | Plus |
Dper\GL21795-PA | 434 | GL21795-PA | 66..430 | 46..362 | 347 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11227-PA | 391 | GA11227-PA | 1..360 | 1..358 | 1718 | 91.9 | Plus |
Dpse\GA14486-PA | 432 | GA14486-PA | 64..428 | 46..362 | 347 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16661-PA | 376 | GM16661-PA | 1..376 | 1..389 | 1913 | 95.6 | Plus |
Dsec\GM10271-PA | 417 | GM10271-PA | 49..414 | 46..366 | 336 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22952-PA | 374 | GD22952-PA | 1..374 | 1..389 | 1871 | 94.1 | Plus |
Dsim\GD21240-PA | 417 | GD21240-PA | 49..414 | 46..366 | 336 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19708-PA | 398 | GJ19708-PA | 1..363 | 1..358 | 1695 | 90.6 | Plus |
Dvir\GJ22735-PA | 280 | GJ22735-PA | 59..277 | 46..252 | 168 | 24.6 | Plus |
Translation from 84 to 1253
> SD07518.hyp MAEEVIGTVKEVLKGIIENVNAPKNESAPGEKKPSTPEGMAVAYSSLVVM AMLPIIFGSIRSVKLHKLKKSTGEKADTMTKKDAMYFPLIASAALFGLYL FFKIFQKVHINYLLTGYFFVLGVIALAHLLSPVINSLMPAAVPKVPFHIL FTKGEGKHKEDIVNYKFSTHDIVCLVISSAIGVWYLLKKHWIANNLFGLA FAINGVEMLHLNNFVTGVILLSGLFFYDIFWVFGTNVMVTVAKSFEAPIK LVFPQDLIENGLNASNFAMLGLGDIVIPGIFIALLLRFDDSKKRKTRIYF YSTLIAYFLGLLATIFVMHVFKHAQPALLYLVPACMGTPLLVALIRGELK VLFAYEDHPEEKPEKKEKKEKDEGVSSSGSKKKESKKGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Spp-PA | 389 | CG11840-PA | 1..389 | 1..389 | 1983 | 100 | Plus |
SppL-PF | 417 | CG17370-PF | 49..414 | 46..366 | 335 | 27.9 | Plus |
SppL-PC | 417 | CG17370-PC | 49..414 | 46..366 | 335 | 27.9 | Plus |
SppL-PB | 417 | CG17370-PB | 49..414 | 46..366 | 335 | 27.9 | Plus |
SppL-PA | 417 | CG17370-PA | 49..414 | 46..366 | 335 | 27.9 | Plus |