Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
SD07644.complete Sequence
1555 bp (1555 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061611
> SD07644.complete
CGTGCTTCAGCCACATTTTTGGCCTAAAACAATTTTTGGCCCCAAACAAT
GGAGGCCCTAGTGAATTATAGTAGTGAGGACGACCAGGAGGATGCTGGCT
TTCAGATACGGGCACCACAACAACAACAACAACTGCGGCATTTGCCGCAT
GCTAAATCCCCGAAAACAACAACTGATAGCTTATTAAAGCAGAAGAACAA
CAATAACTATGGCAGCGGCAACAGTCCGCGCGGCAAGGAACGAGAAAGAG
AGCGCGAGCGGGAGAGAGAGAAGACAAAGCCGATGTCGCAGCAGCAGAGT
CATAGGAGCAGCAGCAGAGGACGCATTGATGAGGTAAAGACTTGCCGTTG
CACCAAATCGATATTTACTTCCCATAATATATACCAAATACCATATGCTA
TTGTACTCCATACGTATGTGTGTGTGTGTGTATCTGGGTTGGAGCGCAAG
CGGATCTTTCATGTGCCGTTTCCTTCCGCTGCCGCAAAGGGCGACGCCAT
CGCCGACTGCGCTGCCAGCAGCAGCACTTACAGAGGCAGGCAAAATAATA
GCACAGAGTCCGCTTTAAATCAAACGTCTAATGTATAGATATCAATCAAA
TCGAAACCGAGATCTTTTAAACTTTTGAGTTAAAGTTAATCCCAGTTGTA
TACATTGGCCAATTCACTTGGGTTCAAATAAAAAAGAGAAAATGCCATGT
AATGAATGAAAAGTACTTGTGCCAAAAAAACAGGACACTGCATCAAATCA
ATAATGCAGCCTAGTTTTCTGTGCCTCCATTCCTTTACGCCAGCAAAAGT
AATAATTCTATACATAGGCAAGGTCATTGGCAGCAGTACTTCATTGTTAA
AACTAAATTAATGGAATGTTAAAACACAATAATGCATGCAGTCCATTCCC
CACTGGTAGTGGGGATTGTAGATTGCAATTAAAGACAAGAACAGATTCAC
AATCTTTTCTTGTAGTCTTGTAGTTCAGCTTTACTTCGGTTATCACTGAT
TAATACTTCCATTAGTTACAGATATAAATCGCAGATCTTGTTAGATTCTG
CATCTTTAGGGGCTTCAGGCATTTTCTTGTGCTATTATTTAGTCATCTGC
TGTTCCCAACTGAAAAATTCAATATTCATATATTTATGTATATTGATCTC
CACGATCGACTGCATGCGCTCCAACCCGTTACATCCAAATTTCGCTACTG
CCAGATTTATATGGGCCAAAAACTCAAAATTAAATCCAAAGACAGAAAAT
TCTGTTTGTTCGGTCCGCTTGCGATTTACACACACATTGTTGTTGTTGTT
CGGCCAGCTTAGTTAAGTCTACAAACTTTATGTTGAATATAGGCAATGCC
CACATGTGTGTTGAATATAGGCCATTTGCACATGTGCATATGTAATTCTG
TATGAGAACATACATACATACACATGAACTGTATGTATGTATATATATTA
GTAAATAAGCAGCCGCATGAAGCTGGCATTTTTATGTGTATCAGTTTCAA
TTTCAAATAAAACTTCTTCGTGTTCGAAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
SD07644.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:03:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6340-RA | 1435 | CG6340-RA | 64..965 | 1..907 | 4405 | 99.2 | Plus |
CG6340-RA | 1435 | CG6340-RA | 978..1390 | 922..1331 | 1965 | 98.7 | Plus |
CG6340-RB | 1928 | CG6340-RB | 87..420 | 1..334 | 1670 | 100 | Plus |
CG6340.a | 1989 | CG6340.a | 214..437 | 111..334 | 1120 | 100 | Plus |
CG6340.a | 1989 | CG6340.a | 87..197 | 1..111 | 555 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:23:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 15373128..15374350 | 111..1331 | 5990 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 2238549..2238748 | 1526..1327 | 985 | 99.5 | Minus |
chrU | 10048995 | chrU | 9376131..9376328 | 1329..1526 | 975 | 99.5 | Plus |
chr3LHet | 2555433 | chr3LHet | 1735322..1735519 | 1329..1526 | 975 | 99.5 | Plus |
chr2R | 21145070 | chr2R | 2234237..2234432 | 1526..1331 | 965 | 99.5 | Minus |
chrYHet | 347003 | chrYHet | 71747..71942 | 1331..1526 | 965 | 99.5 | Plus |
chrYHet | 347003 | chrYHet | 76016..76211 | 1331..1526 | 965 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 4724700..4724895 | 1331..1526 | 965 | 99.5 | Plus |
chr3R | 27901430 | chr3R | 4729012..4729207 | 1331..1526 | 965 | 99.5 | Plus |
chrU | 10048995 | chrU | 9882603..9882796 | 1526..1333 | 955 | 99.5 | Minus |
chrU | 10048995 | chrU | 9773625..9773820 | 1331..1526 | 935 | 98.5 | Plus |
chrU | 10048995 | chrU | 2580169..2580364 | 1331..1526 | 920 | 98 | Plus |
chrU | 10048995 | chrU | 7859607..7859802 | 1331..1526 | 920 | 98 | Plus |
chrU | 10048995 | chrU | 9866883..9867078 | 1526..1331 | 920 | 98 | Minus |
chr3L | 24539361 | chr3L | 24431967..24432162 | 1331..1526 | 920 | 98 | Plus |
chr2RHet | 3288813 | chr2RHet | 2086560..2086755 | 1526..1331 | 920 | 98 | Minus |
chrU | 10048995 | chrU | 1093130..1093325 | 1526..1331 | 905 | 97.4 | Minus |
chrU | 10048995 | chrU | 1097464..1097659 | 1526..1331 | 905 | 97.4 | Minus |
chrU | 10048995 | chrU | 8911733..8911928 | 1331..1526 | 905 | 97.4 | Plus |
chr2RHet | 3288813 | chr2RHet | 2090804..2090999 | 1526..1331 | 905 | 97.4 | Minus |
chr3LHet | 2555433 | chr3LHet | 854124..854321 | 1329..1526 | 900 | 97 | Plus |
chr3LHet | 2555433 | chr3LHet | 858440..858635 | 1331..1526 | 890 | 96.9 | Plus |
chrU | 10048995 | chrU | 8770826..8771023 | 1526..1328 | 885 | 97.5 | Minus |
chrU | 10048995 | chrU | 7548626..7548813 | 1526..1339 | 880 | 97.9 | Minus |
chrU | 10048995 | chrU | 7403986..7404181 | 1331..1526 | 875 | 96.4 | Plus |
chrU | 10048995 | chrU | 8061970..8062166 | 1526..1331 | 875 | 97.5 | Minus |
chr2RHet | 3288813 | chr2RHet | 1752767..1752954 | 1526..1339 | 865 | 97.3 | Minus |
chrX | 22417052 | chrX | 21339618..21339785 | 1359..1526 | 825 | 99.4 | Plus |
chrU | 10048995 | chrU | 9062554..9062728 | 1505..1331 | 815 | 97.7 | Minus |
chrU | 10048995 | chrU | 8957304..8957473 | 1499..1331 | 755 | 97.6 | Minus |
chrU | 10048995 | chrU | 1140164..1140333 | 1357..1526 | 730 | 95.3 | Plus |
chrU | 10048995 | chrU | 1134821..1134990 | 1357..1526 | 730 | 95.3 | Plus |
chr3LHet | 2555433 | chr3LHet | 785042..785207 | 1526..1361 | 725 | 95.8 | Minus |
chrU | 10048995 | chrU | 3567332..3567499 | 1526..1359 | 720 | 95.2 | Minus |
chr3RHet | 2517486 | chr3RHet | 70157..70324 | 1359..1526 | 720 | 95.2 | Plus |
chrU | 10048995 | chrU | 8771735..8771899 | 1526..1361 | 705 | 96.4 | Minus |
chr3LHet | 2555433 | chr3LHet | 786763..786934 | 1526..1355 | 695 | 93.6 | Minus |
chrU | 10048995 | chrU | 1144171..1144338 | 1359..1526 | 690 | 94 | Plus |
chrU | 10048995 | chrU | 6936764..6936930 | 1359..1526 | 625 | 92.9 | Plus |
chrX | 22417052 | chrX | 15372357..15372468 | 1..112 | 560 | 100 | Plus |
chrU | 10048995 | chrU | 6247475..6247587 | 1414..1526 | 535 | 98.2 | Plus |
chrU | 10048995 | chrU | 1724534..1724645 | 1415..1526 | 515 | 97.3 | Plus |
chrU | 10048995 | chrU | 8673663..8673769 | 1437..1331 | 505 | 98.1 | Minus |
chr3RHet | 2517486 | chr3RHet | 65994..66102 | 1418..1526 | 500 | 97.2 | Plus |
chrU | 10048995 | chrU | 9203865..9203957 | 1434..1526 | 435 | 97.8 | Plus |
chrU | 10048995 | chrU | 955587..955699 | 1408..1521 | 385 | 91.2 | Plus |
chrU | 10048995 | chrU | 3678401..3678486 | 1329..1414 | 385 | 96.5 | Plus |
chr3L | 24539361 | chr3L | 24428109..24428194 | 1329..1414 | 385 | 96.5 | Plus |
chrU | 10048995 | chrU | 8910556..8910751 | 1526..1328 | 380 | 81.8 | Minus |
chrU | 10048995 | chrU | 3559982..3560070 | 1447..1359 | 355 | 93.3 | Minus |
chrX | 22417052 | chrX | 15372785..15372904 | 126..245 | 305 | 87 | Plus |
chrU | 10048995 | chrU | 8293889..8293942 | 1473..1526 | 255 | 98.1 | Plus |
chrU | 10048995 | chrU | 7781880..7781926 | 1526..1480 | 205 | 95.7 | Minus |
chr3RHet | 2517486 | chr3RHet | 58477..58538 | 1359..1420 | 205 | 88.7 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:51:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:23:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15483198..15484414 | 111..1331 | 5700 | 98.3 | Plus |
2R | 25286936 | 2R | 6351401..6351600 | 1526..1327 | 985 | 99.5 | Minus |
U | 3151297 | U | 859981..860178 | 1329..1526 | 975 | 99.5 | Plus |
Y | 3667352 | Y | 3507557..3507753 | 1526..1330 | 970 | 99.5 | Minus |
2R | 25286936 | 2R | 6347089..6347284 | 1526..1331 | 965 | 99.5 | Minus |
Y | 3667352 | Y | 587537..587732 | 1331..1526 | 965 | 99.5 | Plus |
Y | 3667352 | Y | 591806..592001 | 1331..1526 | 965 | 99.5 | Plus |
Y | 3667352 | Y | 3503256..3503451 | 1526..1331 | 965 | 99.5 | Minus |
Xmm | 1049845 | Xmm | 266854..267049 | 1526..1331 | 965 | 99.5 | Minus |
3R | 32079331 | 3R | 8898777..8898972 | 1331..1526 | 965 | 99.5 | Plus |
3R | 32079331 | 3R | 8903089..8903284 | 1331..1526 | 965 | 99.5 | Plus |
Y | 3667352 | Y | 2706011..2706206 | 1526..1331 | 935 | 98.5 | Minus |
Xmm | 1049845 | Xmm | 165159..165354 | 1331..1526 | 935 | 98.5 | Plus |
2R | 25286936 | 2R | 3304306..3304501 | 1526..1331 | 920 | 98 | Minus |
2R | 25286936 | 2R | 3312937..3313135 | 1526..1328 | 920 | 97.5 | Minus |
U | 3151297 | U | 497254..497449 | 1331..1526 | 920 | 98 | Plus |
U | 3151297 | U | 1028405..1028600 | 1526..1331 | 920 | 98 | Minus |
Y | 3667352 | Y | 2702201..2702396 | 1526..1331 | 920 | 98 | Minus |
Xmm | 1049845 | Xmm | 180145..180340 | 1331..1526 | 920 | 98 | Plus |
3L | 28110227 | 3L | 24443067..24443262 | 1331..1526 | 920 | 98 | Plus |
2R | 25286936 | 2R | 1516803..1516998 | 1526..1331 | 905 | 97.4 | Minus |
2R | 25286936 | 2R | 1521137..1521332 | 1526..1331 | 905 | 97.4 | Minus |
2R | 25286936 | 2R | 3308550..3308745 | 1526..1331 | 905 | 97.4 | Minus |
Y | 3667352 | Y | 2116326..2116521 | 1526..1331 | 905 | 97.4 | Minus |
Xmm | 1049845 | Xmm | 160408..160603 | 1331..1526 | 905 | 97.4 | Plus |
3L | 28110227 | 3L | 25368647..25368844 | 1329..1526 | 900 | 97 | Plus |
3L | 28110227 | 3L | 25372963..25373158 | 1331..1526 | 890 | 96.9 | Plus |
U | 3151297 | U | 909812..910009 | 1526..1328 | 885 | 97.5 | Minus |
Xmm | 1049845 | Xmm | 910024..910211 | 1526..1339 | 880 | 97.9 | Minus |
U | 3151297 | U | 1026745..1026941 | 1526..1331 | 875 | 97.5 | Minus |
Y | 3667352 | Y | 3366369..3366564 | 1331..1526 | 875 | 96.4 | Plus |
Ymm | 880023 | Ymm | 539495..539690 | 1331..1526 | 875 | 96.4 | Plus |
2R | 25286936 | 2R | 2977723..2977910 | 1526..1339 | 865 | 97.3 | Minus |
X | 23542271 | X | 21474460..21474627 | 1359..1526 | 825 | 99.4 | Plus |
Y | 3667352 | Y | 2122559..2122733 | 1505..1331 | 815 | 97.7 | Minus |
2R | 25286936 | 2R | 1546501..1546670 | 1357..1526 | 730 | 95.3 | Plus |
2R | 25286936 | 2R | 1551844..1552013 | 1357..1526 | 730 | 95.3 | Plus |
3L | 28110227 | 3L | 25299563..25299728 | 1526..1361 | 725 | 95.8 | Minus |
3R | 32079331 | 3R | 1364058..1364225 | 1526..1359 | 720 | 95.2 | Minus |
3L | 28110227 | 3L | 25559673..25559840 | 1359..1526 | 720 | 95.2 | Plus |
U | 3151297 | U | 910721..910885 | 1526..1361 | 705 | 96.4 | Minus |
3L | 28110227 | 3L | 25301284..25301455 | 1526..1355 | 695 | 93.6 | Minus |
2R | 25286936 | 2R | 1555851..1556018 | 1359..1526 | 690 | 94 | Plus |
U | 3151297 | U | 1949875..1950041 | 1359..1526 | 625 | 92.9 | Plus |
X | 23542271 | X | 15482427..15482538 | 1..112 | 560 | 100 | Plus |
U | 3151297 | U | 2821893..2822005 | 1414..1526 | 535 | 98.2 | Plus |
Y | 3667352 | Y | 66811..66922 | 1415..1526 | 515 | 97.3 | Plus |
U | 3151297 | U | 1132940..1133046 | 1437..1331 | 505 | 98.1 | Minus |
3R | 32079331 | 3R | 1368276..1368388 | 1530..1418 | 505 | 96.5 | Minus |
U | 3151297 | U | 969661..969753 | 1434..1526 | 435 | 97.8 | Plus |
U | 3151297 | U | 619974..620059 | 1329..1414 | 385 | 96.5 | Plus |
3R | 32079331 | 3R | 3161262..3161374 | 1408..1521 | 385 | 91.2 | Plus |
3L | 28110227 | 3L | 24439209..24439294 | 1329..1414 | 385 | 96.5 | Plus |
U | 3151297 | U | 1006486..1006681 | 1526..1328 | 380 | 81.8 | Minus |
3L | 28110227 | 3L | 25575098..25575180 | 1444..1526 | 370 | 96.4 | Plus |
3L | 28110227 | 3L | 25567691..25567779 | 1359..1447 | 355 | 93.3 | Plus |
X | 23542271 | X | 15482855..15482974 | 126..245 | 305 | 87 | Plus |
U | 3151297 | U | 1029176..1029229 | 1473..1526 | 255 | 98.1 | Plus |
3R | 32079331 | 3R | 1375844..1375905 | 1420..1359 | 205 | 88.7 | Minus |
XYmm | 216041 | XYmm | 208032..208078 | 1526..1480 | 205 | 95.7 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:28:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 15491296..15492087 | 111..907 | 3855 | 99.1 | Plus |
X | 23527363 | X | 15492100..15492512 | 922..1331 | 1965 | 98.7 | Plus |
2R | 25260384 | 2R | 6352600..6352799 | 1526..1327 | 985 | 99.5 | Minus |
Y | 3410481 | Y | 3339877..3340073 | 1526..1330 | 970 | 99.4 | Minus |
Y | 3410481 | Y | 569620..569815 | 1331..1526 | 965 | 99.4 | Plus |
Y | 3410481 | Y | 565351..565546 | 1331..1526 | 965 | 99.4 | Plus |
Y | 3410481 | Y | 3335576..3335771 | 1526..1331 | 965 | 99.4 | Minus |
2R | 25260384 | 2R | 6348288..6348483 | 1526..1331 | 965 | 99.4 | Minus |
3R | 31820162 | 3R | 8643920..8644115 | 1331..1526 | 965 | 99.4 | Plus |
3R | 31820162 | 3R | 8639608..8639803 | 1331..1526 | 965 | 99.4 | Plus |
Unimproved_211000022278596_90_958 | 868 | Unimproved_211000022278596_90_958 | 65..260 | 1526..1331 | 965 | 99.4 | Minus |
Unimproved_211000022207302_179_715 | 536 | Unimproved_211000022207302_179_715 | 325..520 | 1331..1526 | 950 | 98.9 | Plus |
Y | 3410481 | Y | 2634212..2634407 | 1526..1331 | 935 | 98.4 | Minus |
Unimproved_211000022211225_83_726 | 643 | Unimproved_211000022211225_83_726 | 224..422 | 1526..1328 | 935 | 97.9 | Minus |
Y | 3410481 | Y | 2630402..2630597 | 1526..1331 | 920 | 97.9 | Minus |
2R | 25260384 | 2R | 3304306..3304501 | 1526..1331 | 920 | 97.9 | Minus |
2R | 25260384 | 2R | 3312937..3313135 | 1526..1328 | 920 | 97.4 | Minus |
3L | 28103327 | 3L | 24436167..24436362 | 1331..1526 | 920 | 97.9 | Plus |
Unmapped_scaffold_35 | 57785 | Unmapped_scaffold_35 | 28379..28574 | 1331..1526 | 920 | 97.9 | Plus |
Y | 3410481 | Y | 2215435..2215630 | 1526..1331 | 905 | 97.4 | Minus |
2R | 25260384 | 2R | 3308550..3308745 | 1526..1331 | 905 | 97.4 | Minus |
2R | 25260384 | 2R | 1521137..1521332 | 1526..1331 | 905 | 97.4 | Minus |
2R | 25260384 | 2R | 1516803..1516998 | 1526..1331 | 905 | 97.4 | Minus |
3L | 28103327 | 3L | 25361747..25361944 | 1329..1526 | 900 | 96.9 | Plus |
Unimproved_211000022211250_23_557 | 534 | Unimproved_211000022211250_23_557 | 111..308 | 1526..1328 | 895 | 97.4 | Minus |
3L | 28103327 | 3L | 25366063..25366258 | 1331..1526 | 890 | 96.9 | Plus |
Y | 3410481 | Y | 3183844..3184039 | 1331..1526 | 875 | 96.4 | Plus |
2R | 25260384 | 2R | 2977723..2977910 | 1526..1339 | 865 | 97.3 | Minus |
X | 23527363 | X | 21459552..21459719 | 1359..1526 | 825 | 99.4 | Plus |
Y | 3410481 | Y | 2221668..2221842 | 1505..1331 | 815 | 97.7 | Minus |
2R | 25260384 | 2R | 1551844..1552013 | 1357..1526 | 730 | 95.2 | Plus |
2R | 25260384 | 2R | 1546501..1546670 | 1357..1526 | 730 | 95.2 | Plus |
3L | 28103327 | 3L | 25292663..25292828 | 1526..1361 | 725 | 95.7 | Minus |
3L | 28103327 | 3L | 25552773..25552940 | 1359..1526 | 720 | 95.2 | Plus |
3R | 31820162 | 3R | 1161636..1161803 | 1526..1359 | 720 | 95.2 | Minus |
3L | 28103327 | 3L | 25294384..25294555 | 1526..1355 | 695 | 93.6 | Minus |
2R | 25260384 | 2R | 1555851..1556018 | 1359..1526 | 690 | 94 | Plus |
X | 23527363 | X | 15490525..15490636 | 1..112 | 560 | 100 | Plus |
Y | 3410481 | Y | 70609..70720 | 1526..1415 | 515 | 97.3 | Minus |
3R | 31820162 | 3R | 1165854..1165966 | 1530..1418 | 505 | 96.4 | Minus |
3L | 28103327 | 3L | 24432309..24432394 | 1329..1414 | 385 | 96.5 | Plus |
Y | 3410481 | Y | 658353..658431 | 1521..1443 | 380 | 98.7 | Minus |
3L | 28103327 | 3L | 25568198..25568280 | 1444..1526 | 370 | 96.3 | Plus |
3L | 28103327 | 3L | 25560791..25560879 | 1359..1447 | 355 | 93.2 | Plus |
X | 23527363 | X | 15490953..15491072 | 126..245 | 325 | 86.9 | Plus |
Y | 3410481 | Y | 70719..70797 | 1437..1359 | 290 | 91.1 | Minus |
3R | 31820162 | 3R | 1173422..1173483 | 1420..1359 | 205 | 88.7 | Minus |
Y | 3410481 | Y | 2219599..2219629 | 1526..1496 | 140 | 96.7 | Minus |
Blast to na_te.dros performed 2019-03-15 23:23:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 4313..4508 | 1331..1526 | 935 | 97.4 | Plus |
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 1..196 | 1331..1526 | 926 | 96.9 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 715..865 | 163..317 | 124 | 58.6 | Plus |
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 78..114 | 1444..1408 | 122 | 81.1 | Minus |
1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 4390..4426 | 1444..1408 | 113 | 78.4 | Minus |
Ivk | 5402 | Ivk IVK 5402bp | 3161..3236 | 1117..1041 | 112 | 64.1 | Minus |
SD07644.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:24:29 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 15372357..15372467 | 1..111 | 100 | -> | Plus |
chrX | 15373129..15374350 | 112..1331 | 99 | == | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:03:26 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6340-RA | 1..540 | 49..588 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:38:07 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6340-RA | 1..540 | 49..588 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:26:38 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6340-RA | 1..540 | 49..588 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:07:03 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6340-RA | 1..540 | 49..588 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:32:21 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6340-RA | 1..540 | 49..588 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:19:07 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6340-RA | 51..1343 | 1..1300 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:38:06 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6340-RA | 51..1343 | 1..1300 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:26:38 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6340-RA | 54..1346 | 1..1300 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:07:03 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6340-RA | 51..1343 | 1..1300 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:32:21 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6340-RA | 54..1346 | 1..1300 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:24:29 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15482427..15482537 | 1..111 | 100 | -> | Plus |
X | 15483199..15484414 | 112..1331 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:24:29 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15482427..15482537 | 1..111 | 100 | -> | Plus |
X | 15483199..15484414 | 112..1331 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:24:29 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15482427..15482537 | 1..111 | 100 | -> | Plus |
X | 15483199..15484414 | 112..1331 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:26:38 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15376460..15376570 | 1..111 | 100 | -> | Plus |
arm_X | 15377232..15378447 | 112..1331 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:43:05 Download gff for
SD07644.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15491297..15492512 | 112..1331 | 98 | == | Plus |
X | 15490525..15490635 | 1..111 | 100 | -> | Plus |
SD07644.pep Sequence
Translation from 48 to 587
> SD07644.pep
MEALVNYSSEDDQEDAGFQIRAPQQQQQLRHLPHAKSPKTTTDSLLKQKN
NNNYGSGNSPRGKEREREREREREKTKPMSQQQSHRSSSRGRIDEVKTCR
CTKSIFTSHNIYQIPYAIVLHTYVCVCVSGLERKRIFHVPFPSAAAKGDA
IADCAASSSTYRGRQNNSTESALNQTSNV*
SD07644.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:41:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG17886-PA | 545 | GG17886-PA | 1..47 | 1..49 | 168 | 82 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6340-PA | 179 | CG6340-PA | 1..179 | 1..179 | 933 | 100 | Plus |
CG6340-PF | 107 | CG6340-PF | 1..98 | 1..98 | 500 | 99 | Plus |
CG6340-PB | 513 | CG6340-PB | 1..95 | 1..95 | 492 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:41:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19570-PA | 146 | GM19570-PA | 1..104 | 1..128 | 226 | 67.9 | Plus |
Dsec\GM11172-PA | 112 | GM11172-PA | 1..109 | 1..109 | 189 | 77.5 | Plus |
Dsec\GM19573-PA | 103 | GM19573-PA | 1..99 | 1..105 | 177 | 77.4 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:41:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE17192-PA | 552 | GE17192-PA | 1..119 | 1..95 | 206 | 60 | Plus |
SD07644.hyp Sequence
Translation from 48 to 587
> SD07644.hyp
MEALVNYSSEDDQEDAGFQIRAPQQQQQLRHLPHAKSPKTTTDSLLKQKN
NNNYGSGNSPRGKEREREREREREKTKPMSQQQSHRSSSRGRIDEVKTCR
CTKSIFTSHNIYQIPYAIVLHTYVCVCVSGLERKRIFHVPFPSAAAKGDA
IADCAASSSTYRGRQNNSTESALNQTSNV*
SD07644.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:52:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6340-PA | 179 | CG6340-PA | 1..179 | 1..179 | 933 | 100 | Plus |
CG6340-PF | 107 | CG6340-PF | 1..98 | 1..98 | 500 | 99 | Plus |
CG6340-PB | 513 | CG6340-PB | 1..95 | 1..95 | 492 | 100 | Plus |