Clone SD07723 Report

Search the DGRC for SD07723

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:77
Well:23
Vector:pOT2
Associated Gene/Transcriptstj-RB
Protein status:SD07723.pep: gold
Preliminary Size:6142
Sequenced Size:6395

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12295 2001-01-01 Release 2 assignment
CG12295 2003-01-01 Sim4 clustering to Release 3
CG12295 2003-01-14 Blastp of sequenced clone
stj 2008-04-29 Release 5.5 accounting
stj 2008-08-15 Release 5.9 accounting
stj 2008-12-18 5.12 accounting

Clone Sequence Records

SD07723.complete Sequence

6395 bp (6395 high quality bases) assembled on 2003-01-14

GenBank Submission: AY069830

> SD07723.complete
CCACGACAGCGTGTATATTTAAAGTTAAACAAAATCACCAACGCGAATTG
CATTCTACGATATTCAAACGGAACAGGAGTGATAAAGCTTTAACTTAAGC
TCTATCCTAAGCAGTAAAACAAAAGTTTCAAGCACAATCTTTTGTTCCGT
CCGGTCTGTGAAAAAAAAGAATTAATCTCAACTTTTATTTCTTATCTTGA
AATGTAAGCATATGCCGAAGTCGTACAATACATATGTACATTCAGCAGTA
ATTCATATTATATTGTATATTAGTATAAATCTGAATATTCTTTAAACGCC
ACCTGGCGGTTACTTTGGCAAGTGAGTTTGAATCCAACTTTTGGGCAAAG
TAGCCCGGGTTCCTAGTGTGCTATGTCCTCCCAGCTGGAAAGCTTCACCT
GCGGCCAACTGTCACCATTCGCCAGCTGGTGCAACAGATGCTCGGCCAGC
TGGAAGGACACGCACGTCAATCTGGTGGAGGCGCAGGCGCGTTGGCAGGT
AAACAAACACCTGTAGCACTCGCGGCGAGGTAAACAAGTGCAGGGCGCAG
ATGCGCCAAATGTCAGGGCAAGCGCACTGGGTGGAAAGAAGAGTGCGGCA
AATGGCCAAAAGCGAGAGACAAGGGTTGTCCCTTTTCGGCTAAGGTATGT
TGGGCAAAAGAGCTTTAAGCTGGCCCAGAAACGTTAAAAGAAACGTCAAA
ACGGCCACGACAGTGTAGAGAGAAAAGTTTTCGCTGGCCAACAACACACA
CACACGGAAAAGTGCTAGGTCGCGCGATAAAACTGTGGAAAATTAATTTA
GAAAATTGGAAAAACTTAGCAAAATACAATGTACAGTGCTTGAGTGACGG
CGAGTATTGAGTAGCAACTGAAGGTATCCCCAGTGAAGACGCGGGTGGTA
TGCTACCGGATGGCCAGGGCAGGTGGCCAAAACCGAGCTAACGGGATATG
TGGTGCAAACGTGGTGCGTGCGTGTTGCCTGTGAGTGTGTGAATGTGTGT
GTGTGCAGGTACAAAGTAGGCTAAGAAAATCGCAGAGCCTGGTATTTATG
TCGCGCTCCCGCTGGATCGACCACCATCATCAGCAGTTACTAGATCATTG
GACACCGAGGATAGCGCTGCTCAATCATCATGGCCTGGTCCCGTCTCCTG
GCCTGGTGGCGCCTCTGCTTGGGCCTGCTCTCCGTTCTGGTCTGTTTGGC
ACCGTGCGTCAATCTGCAGCCAGCCGAGAACATCAACTACAATCTCGTTC
ATTCGTGGGCCGACAAATTGGGCATGGAGCTGTTTCATCTGGGCGATTTC
ATCACCAGGCGCAAGGAGGTGCAAGAGAGTTTCAAGGATGCAAAGGTCGT
TTCGCGCAACGGCGCTTCTATTGTCGATTCGATGGCCAAGGAAATCGAAA
TGATGATGGACCTAAAAGTCAGTGCAGTGAGGCGAATCATGGACACGGCT
GAGAACACGGCGTTGTCGCATCAGAACGACATGGCGGACAAGATGTTCTC
CTATTATAGTGCCAAGGAGATGCTGGAGCCCGGCGATCCAGTCCCGCCCA
TTCCCACACCGGCTCCCGACATGGACAAGGATATAGGCGAGCCGCTGATC
TACGTCCAGCCGAAGGTGGTGGTGTTGGAACCGCGTCCGGAATTCCACAA
TACTCCGGTCAACTTTAGCGTCAGTTCGGTCCACGTGCCAGTCAATGTGT
TCGATCGAGCACCGGATGTGATAAAAGCAATTCAGTGGTCGGAGAATTTG
GATCAGATATTCCGTGACAATTACAAAAACGATCCGACATTGTCGTGGCA
ATTCTTTGGCAGTTCGACTGGCTTTATGCGTCAATTCCCTGCATCGAAGT
GGCGAAAGGACGTACCGGTCGATCTATACGATTGCCGACTACGCTCCTGG
TACATGGAGGCGGCGACGAGTCCGAAGGATATTGTTATCCTGATGGATGG
ATCCGGTTCAATGTTGGGACAGAGGCTAGATATCGCAAAGCATGTTGTCA
ATACGATACTCGATACATTAGGTACAAATGACTTTGTGAACATCTTCACC
TTTGATAAGGAAGTGAGCCCAGTCGTCCCATGTTTCGAAGACACACTGAT
TCAAGCCAATCTGGGCAACATACGCGAACTGAAAGAAGGGATTGAACTGT
TTAGACCCAAATCGATCGCCAATTATACCGCTGCATTGACAAAGGCATTC
GAGCTATTGGAAGAGACCAAGTTGAGTTCGCGCGGGGCGCAGTGCAATCA
GGCGATCATGATCATTGGCGACGGGGCGCCGGAGAACAATCGCGAGGTCT
TCGAGTTGCACAATTGGCGGGACCCGCCGTACAAGCCGGTCCGTGTGTTC
ACCTACCTGATTGGCAAGGAGGTGGCCAATTGGGATGATATACGGTGGAT
GGCGTGCGAGAATCAGGGCTACTACGTCCACCTCAGCGACACCGCCGAGG
TGCGCGAGATGGTCTTGAATTACATACCGGTTATGGCCAGGCCGCTCGTC
CTGGGCAGGCACGATCATCCGGTGATTTGGTCGCAGGTCTATGCGGACAT
CGAGGACACGAAGCTATCCGACTATCTGTGGGACATTAATCAGTGCGAGT
ACCAGAAGGCCGATGTCCTCGAGTATTGGCAGGTGCACGATCGGATGCTG
GAGCCCAGCGAAATGCACCGCCGGAAGTACAGAAGGATGAAGGAGACCTG
GAACCAGCCGGTGGACTCGAATGTGTACCAATTTATGACCACCGTATCGA
TGCCCATCTACGATCGTCGCGAGAACGCGACTAGGATTGCGAATATATTG
GGCGTGGCCGGCACGGATGTGCCCATCAATGAAATCAAAAAGCTGCTGTC
GCCGTTCACGCTCGGCGTGAATGGCTATGCGTTTATAGTAACCAACAATG
GTTATGTACTATTCCATCCAGACTTTCGTCCAATTTTCCAAGGCTACATA
TTAAAGCCAGCATACAATAGCGTTGACATGATTGAAGTCGAGCTATTGGA
TGACGATCGACCCGCCAGAGACTTTAATCCAGTGCTGATGACGATAAGAG
ATTCTATAATCAATCAATCGACAGGCAGCAAATGGATGTTAGTCAAAAAT
CATTTCGATGAAATGAAACGGGTGGCACGCGTAAAGCGACAATACTACTG
GACGGCCATCAAGAAGACGCCCTTTACTCTGGTCATTTCCTATCCGGAGC
AATACGGCGTGAGTCACATGGACATCCGAGCTGACCAGGAGATCCATCGC
ATAAGCATAAAGGGCACAAACTTGCGCAGCGTTTTCAGCGGCAAGCGGTG
GAAAATTCATCCCGACTGGCTATTTTGTAAGCACAGCAACAGGACATTCA
AAACGCCAGAGATCGAACTGCTGTACTTTCTCGAGCGTATGTCTGAGCCT
GGCTGGCGATGGCCGGGTAGTCGGAGTGCTATGCCCCCGGAGCACGCGGC
CGCCATGTTTTGCGATCGGCAGCTAATGCAGGCTCTGGTCTTCGATGCCC
GAGTCACCGGGTGGTTCTCCAACAATACCAGCTTTAACTCCAAGGACGAC
AAAGGAAACGAATTCAAGCAGCGTTTTGGCGTCACCGTCGCCTTTTTGGC
CACCCACAGTGGTCTCACCCGCTGGCATGAGTTCCACTCGAATGCTGCCG
AGGAATCCGGAGTCGGCGAGACTTTTAGCCAAAATAACACGCGGGCCATC
GATGAGATTTGGTACAAACGCGCCGTGGACCAACATTTTGTGCGGGAGGA
GAGCTTCGTTTACTCCGTGCCCTTCGATGCGGGTGAAAGCAACTCAGAGA
TCCTGGTGACCGCCAGTCATGCCGTTTTCCACAATGAGGGCGGCAAGACT
GCACCGGCGGCTGTTGTGGGCTTCCAGTTTCAGCATTCGGCGCTCTACAA
GCTCTTCCACAACATCACCGGCAATGCCTGTGCCGTGGATGACAAAGACT
GCTATATACTGGACAACAATGGCTATGTGATCATTTCGACGAGGGTCCAC
GAGACGGGTCGATTCTTTGGCGAGGTGAACGGAGCGATCATGAAGCGACT
ACTGGAGGAGAATGTCTACAGGCAGGTCACTGTCTACGATTACCAGGCGG
TGTGCTTCGAGTCCAAGAACGATAACAACGCCTCCAGCATGCTGCTTTCG
CCCCTGTTCCATCTGCTGCGCGTGGGCAAATGGCTGCTGCATACGGCGCT
GTGGTATATTGTACAACTGTTGCAGTGGGCGCCCGGTGTGTCCAGCCACT
ATGCGGATATGTATGGTGACTCCAACGACACGGAGCCACCGCCGCCGGAG
CCGCATCCGGATCACCATGCTCGCAACGGCAATGGGCATGGGAAGAAGGA
CGATGACCACTGGCTGCGCTACTTGACACTCCATCGCACCCGGCTCAAGC
CGTGCGACATGAAGCGCGATCTGTACACGCTGTTCAATGAAAAGGACAAC
GTTGTCTACAATATGACAGCCCATGCATGTGAGCGGCCATTTGTCGTCCT
GCCCATCCCGTTCAGCAACCTCATCCTGCTGGTCATCGACCAGCTGTGTC
CCAGGGACGGCTCAGTCGTCCTCACGGTGAATCCGCAGCCGATCGACTAT
CATCTGTCGGTCAACGATTCGTTGGCATGCTACAAGCAGGCTCGCGAGTT
CAACCGCATGCGACCACACAGCTGCATCAGTCGGCACGCGAACGAGAGCG
GCATTAAGCTGTGCGGAAAGGCCTGCTCCGTGTACGCCAACCTGGGGCTG
CTGCTCCTCTGTCACATACTGAGTCGTTGGCTGTAACGGCGGAAGATGGA
TTTAGCTTAGATCTAGGCAATATGTTTTTGTATTATATACGAAGGGCAAT
CGAGGAGGTGGGAAAATTTTTTACTCTAACGCTTGAGCGCAGTTCAATAT
TTTTGGTCACCTAGAGAAACTTTTCCAAATTAGTTCTTAAGTAGCTAAAT
ACGAGTATCCGTATCCGCGACCGAATCCGGAAGCGGATCCGCATCAGAGA
ACGCGGACAGTGTGTGCCGCCTATGACGGACTGGGCGCAGGGCTTATTGT
AGACCTTCCAATAGACAGGACAAAAACATATATTTACTGCATTAACATAT
GAATATAAATATTATATATTGTATAACTGAAAATTCCAACAACGGCCTTA
AACGACTTGCAACCTTCAAGTAAGCTGAATGCAAAGCGCTGTCATCCAGG
CGACAAAACTCATGGCACACACTGTACCCAATGCCGACTACTGCCCATGG
TTATGCGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGA
GTGAGTGTGTGCGTGGTGTGTGTGTGCATGTGTGAGAGTTAGTCCTAATC
TAAGAAGGCCACATTTGTAAGTAACACCTAGCTACGAGTTTATGTTTAAA
GAACGGATCAAGAAACCTATCGGTAAAGGCGAATAATGGAACCATTTAAT
TATATATACACACACTCATACGATAATACGATATATACCTACGAGTACGC
CCGGTACTGTACATGCTAACTAATTTAAGTAGCTTTTGTATATTTGCTTA
GCCTAGCCCAGAGAAAAACTAACCGAAAGTTCAGCCTCGGAGCCTTGGAA
AACTACATACTTTTATAGACATTCGTTAAAAAGGACATTGTAGGCCACTC
AAGAACAAGCAAAACCAAAAAGAGATCCGATTTAAAGGCATTGTTTTTAT
ATACACTGATGATGACGATACCTAGCATTACCCACAAGTACCTACATACA
TATATGAGAAATACTTTTTATTACTAACTACTTGATACGAGCCACAGAAC
TGAGACGATTGAGTAAACGCAGCAGCATCTAGCGACTAAATTATTAATAA
TACTACACTTAAACCATTGACTAGTTGAAATTTACCATAACAAACTATCG
TACATCTAGACAAACAAACTCTCAGCCGAAAGGATATCTCCTCCGATCGG
AACAGAACTCGCTAAGCTTTAGACACCCCACATTTCCCCATGGTAGTGTA
ATCAACTTGTGCCATTCGAACTGCCTAGTATTTGTTATTAACTATTTAAT
ATGGAATCGGAAGTACGTTTAACCCCCTTGCAGGTTGTCTCACCACATCC
CTACTCATTTTGTACATTTCGATTGAAAGTAGGGTAAAGCAAATATCAAA
CTATGCCAAGCTTGCAGGCCTCTTTACCAGAACATTTTAGCCCGATCTCA
AGTTTAAACTCTTCTCACAGACACAAACGAAACAAAGGATACAAACACAC
TCGCTGGCAGCCACAATTGTACTACATACATAAACATATTTCGAATTCAA
TCAAATACAAGTAAAACCATTTGTCTAATGTGCTAAAAGAAGAAACTGAT
AATAAACACAAGATAATTTCGAAAATCAAAAAAAAAAAAAAAAAA

SD07723.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:52:48
Subject Length Description Subject Range Query Range Score Percent Strand
stj.a 6438 stj.a 2836..6438 2779..6381 18015 100 Plus
stj.c 6495 stj.c 3574..6495 3460..6381 14610 100 Plus
stj.b 6492 stj.b 3571..6492 3460..6381 14610 100 Plus
stj.c 6495 stj.c 1..2780 1..2780 13900 100 Plus
stj.a 6438 stj.a 1..2780 1..2780 13900 100 Plus
stj.b 6492 stj.b 1..2779 1..2779 13895 100 Plus
stj.c 6495 stj.c 2836..3518 2779..3461 3415 100 Plus
stj.b 6492 stj.b 2834..3515 2780..3461 3410 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:06:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9705206..9706879 4694..6377 8220 99.3 Plus
chr2R 21145070 chr2R 9692809..9694053 1..1245 6060 99.1 Plus
chr2R 21145070 chr2R 9704384..9704928 4150..4694 2725 100 Plus
chr2R 21145070 chr2R 9697239..9697689 2105..2555 2255 100 Plus
chr2R 21145070 chr2R 9696599..9696996 1708..2105 1990 100 Plus
chr2R 21145070 chr2R 9695241..9695518 1432..1709 1345 98.9 Plus
chr2R 21145070 chr2R 9704073..9704297 3926..4150 1125 100 Plus
chr2R 21145070 chr2R 9701696..9701900 3115..3319 1025 100 Plus
chr2R 21145070 chr2R 9701961..9702105 3318..3462 725 100 Plus
chr2R 21145070 chr2R 9703879..9704020 3785..3926 710 100 Plus
chr2R 21145070 chr2R 9697802..9697944 2553..2695 700 99.3 Plus
chr2R 21145070 chr2R 9703703..9703822 3666..3785 585 99.2 Plus
chr2R 21145070 chr2R 9703520..9703631 3555..3666 560 100 Plus
chr2R 21145070 chr2R 9701395..9701506 2936..3047 545 99.1 Plus
chr2R 21145070 chr2R 9695069..9695179 1322..1432 540 99.1 Plus
chr2R 21145070 chr2R 9702873..9702966 3462..3555 470 100 Plus
chr2R 21145070 chr2R 9698072..9698157 2694..2779 430 100 Plus
chr2R 21145070 chr2R 9694132..9694213 1246..1327 410 100 Plus
chr2R 21145070 chr2R 9701117..9701198 2779..2860 410 100 Plus
chr2R 21145070 chr2R 9701258..9701333 2860..2935 380 100 Plus
chr2R 21145070 chr2R 9701560..9701632 3043..3115 365 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:51:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13817888..13819575 4694..6381 8440 100 Plus
2R 25286936 2R 13805474..13806718 1..1245 6225 100 Plus
2R 25286936 2R 13817066..13817610 4150..4694 2725 100 Plus
2R 25286936 2R 13809914..13810364 2105..2555 2255 100 Plus
2R 25286936 2R 13809273..13809670 1708..2105 1990 100 Plus
2R 25286936 2R 13807898..13808175 1432..1709 1390 100 Plus
2R 25286936 2R 13816755..13816979 3926..4150 1125 100 Plus
2R 25286936 2R 13814378..13814582 3115..3319 1025 100 Plus
2R 25286936 2R 13814643..13814787 3318..3462 725 100 Plus
2R 25286936 2R 13810477..13810619 2553..2695 715 100 Plus
2R 25286936 2R 13816561..13816702 3785..3926 710 100 Plus
2R 25286936 2R 13816385..13816504 3666..3785 600 100 Plus
2R 25286936 2R 13816202..13816313 3555..3666 560 100 Plus
2R 25286936 2R 13814077..13814188 2936..3047 545 99.1 Plus
2R 25286936 2R 13807726..13807836 1322..1432 540 99.1 Plus
2R 25286936 2R 13815555..13815648 3462..3555 470 100 Plus
2R 25286936 2R 13810751..13810836 2694..2779 430 100 Plus
2R 25286936 2R 13806797..13806878 1246..1327 410 100 Plus
2R 25286936 2R 13813799..13813880 2779..2860 410 100 Plus
2R 25286936 2R 13813940..13814015 2860..2935 380 100 Plus
2R 25286936 2R 13814242..13814314 3043..3115 365 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:12:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 13819087..13820774 4694..6381 8440 100 Plus
2R 25260384 2R 13806673..13807917 1..1245 6225 100 Plus
2R 25260384 2R 13818265..13818809 4150..4694 2725 100 Plus
2R 25260384 2R 13811113..13811563 2105..2555 2255 100 Plus
2R 25260384 2R 13810472..13810869 1708..2105 1990 100 Plus
2R 25260384 2R 13809097..13809374 1432..1709 1390 100 Plus
2R 25260384 2R 13817954..13818178 3926..4150 1125 100 Plus
2R 25260384 2R 13815577..13815781 3115..3319 1025 100 Plus
2R 25260384 2R 13815842..13815986 3318..3462 725 100 Plus
2R 25260384 2R 13811676..13811818 2553..2695 715 100 Plus
2R 25260384 2R 13817760..13817901 3785..3926 710 100 Plus
2R 25260384 2R 13817584..13817703 3666..3785 600 100 Plus
2R 25260384 2R 13817401..13817512 3555..3666 560 100 Plus
2R 25260384 2R 13815276..13815387 2936..3047 545 99.1 Plus
2R 25260384 2R 13808925..13809035 1322..1432 540 99 Plus
2R 25260384 2R 13816754..13816847 3462..3555 470 100 Plus
2R 25260384 2R 13811950..13812035 2694..2779 430 100 Plus
2R 25260384 2R 13814998..13815079 2779..2860 410 100 Plus
2R 25260384 2R 13807996..13808077 1246..1327 410 100 Plus
2R 25260384 2R 13815139..13815214 2860..2935 380 100 Plus
2R 25260384 2R 13815441..13815513 3043..3115 365 100 Plus
Blast to na_te.dros performed 2019-03-15 23:06:05
Subject Length Description Subject Range Query Range Score Percent Strand
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 2537..2728 6137..6328 140 56.1 Plus

SD07723.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:06:47 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9692809..9694053 1..1245 99 -> Plus
chr2R 9694132..9694213 1246..1327 100 -> Plus
chr2R 9695075..9695179 1328..1432 100 -> Plus
chr2R 9695242..9695518 1433..1709 98 -> Plus
chr2R 9704073..9704297 3926..4150 100 -> Plus
chr2R 9696601..9696995 1710..2104 100 -> Plus
chr2R 9697239..9697688 2105..2554 100 -> Plus
chr2R 9697804..9697944 2555..2695 99 -> Plus
chr2R 9698074..9698157 2696..2779 100 -> Plus
chr2R 9701118..9701198 2780..2860 100 -> Plus
chr2R 9701259..9701333 2861..2935 100 -> Plus
chr2R 9701395..9701502 2936..3043 100 -> Plus
chr2R 9701561..9701632 3044..3115 100 -> Plus
chr2R 9701697..9701899 3116..3318 100 -> Plus
chr2R 9701962..9702104 3319..3461 100 -> Plus
chr2R 9702873..9702966 3462..3555 100 -> Plus
chr2R 9703521..9703631 3556..3666 100 -> Plus
chr2R 9703704..9703822 3667..3785 99 -> Plus
chr2R 9703880..9704019 3786..3925 100 -> Plus
chr2R 9704385..9704927 4151..4693 100 -> Plus
chr2R 9705206..9706879 4694..6377 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:28:38 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
stj-RB 1..3657 1130..4786 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:49:22 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
stj-RB 1..3657 1130..4786 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:27:30 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
stj-RB 1..3657 1130..4786 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:31:27 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
stj-RB 1..3657 1130..4786 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:19:07 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
stj-RB 1..3657 1130..4786 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:28:37 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
stj-RB 1..6377 1..6377 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:49:22 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
stj-RB 1..6377 1..6377 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:27:30 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
stj-RB 1..6057 321..6377 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:31:27 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
stj-RB 1..6377 1..6377 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:19:07 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
stj-RB 1..6057 321..6377 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:47 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13807732..13807836 1328..1432 100 -> Plus
2R 13807899..13808175 1433..1709 100 -> Plus
2R 13816755..13816979 3926..4150 100 -> Plus
2R 13805474..13806718 1..1245 100 -> Plus
2R 13806797..13806878 1246..1327 100 -> Plus
2R 13809275..13809669 1710..2104 100 -> Plus
2R 13809914..13810363 2105..2554 100 -> Plus
2R 13810479..13810619 2555..2695 100 -> Plus
2R 13810753..13810836 2696..2779 100 -> Plus
2R 13813800..13813880 2780..2860 100 -> Plus
2R 13813941..13814015 2861..2935 100 -> Plus
2R 13814077..13814184 2936..3043 100 -> Plus
2R 13814243..13814314 3044..3115 100 -> Plus
2R 13814379..13814581 3116..3318 100 -> Plus
2R 13814644..13814786 3319..3461 100 -> Plus
2R 13815555..13815648 3462..3555 100 -> Plus
2R 13816203..13816313 3556..3666 100 -> Plus
2R 13816386..13816504 3667..3785 100 -> Plus
2R 13816562..13816701 3786..3925 100 -> Plus
2R 13817067..13817609 4151..4693 100 -> Plus
2R 13817888..13819571 4694..6377 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:47 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13807732..13807836 1328..1432 100 -> Plus
2R 13807899..13808175 1433..1709 100 -> Plus
2R 13816755..13816979 3926..4150 100 -> Plus
2R 13805474..13806718 1..1245 100 -> Plus
2R 13806797..13806878 1246..1327 100 -> Plus
2R 13809275..13809669 1710..2104 100 -> Plus
2R 13809914..13810363 2105..2554 100 -> Plus
2R 13810479..13810619 2555..2695 100 -> Plus
2R 13810753..13810836 2696..2779 100 -> Plus
2R 13813800..13813880 2780..2860 100 -> Plus
2R 13813941..13814015 2861..2935 100 -> Plus
2R 13814077..13814184 2936..3043 100 -> Plus
2R 13814243..13814314 3044..3115 100 -> Plus
2R 13814379..13814581 3116..3318 100 -> Plus
2R 13814644..13814786 3319..3461 100 -> Plus
2R 13815555..13815648 3462..3555 100 -> Plus
2R 13816203..13816313 3556..3666 100 -> Plus
2R 13816386..13816504 3667..3785 100 -> Plus
2R 13816562..13816701 3786..3925 100 -> Plus
2R 13817067..13817609 4151..4693 100 -> Plus
2R 13817888..13819571 4694..6377 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:06:47 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13807732..13807836 1328..1432 100 -> Plus
2R 13807899..13808175 1433..1709 100 -> Plus
2R 13816755..13816979 3926..4150 100 -> Plus
2R 13805474..13806718 1..1245 100 -> Plus
2R 13806797..13806878 1246..1327 100 -> Plus
2R 13809275..13809669 1710..2104 100 -> Plus
2R 13809914..13810363 2105..2554 100 -> Plus
2R 13810479..13810619 2555..2695 100 -> Plus
2R 13810753..13810836 2696..2779 100 -> Plus
2R 13813800..13813880 2780..2860 100 -> Plus
2R 13813941..13814015 2861..2935 100 -> Plus
2R 13814077..13814184 2936..3043 100 -> Plus
2R 13814243..13814314 3044..3115 100 -> Plus
2R 13814379..13814581 3116..3318 100 -> Plus
2R 13814644..13814786 3319..3461 100 -> Plus
2R 13815555..13815648 3462..3555 100 -> Plus
2R 13816203..13816313 3556..3666 100 -> Plus
2R 13816386..13816504 3667..3785 100 -> Plus
2R 13816562..13816701 3786..3925 100 -> Plus
2R 13817067..13817609 4151..4693 100 -> Plus
2R 13817888..13819571 4694..6377 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:27:30 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9703708..9703818 3556..3666 100 -> Plus
arm_2R 9703891..9704009 3667..3785 100 -> Plus
arm_2R 9704067..9704206 3786..3925 100 -> Plus
arm_2R 9701884..9702086 3116..3318 100 -> Plus
arm_2R 9702149..9702291 3319..3461 100 -> Plus
arm_2R 9703060..9703153 3462..3555 100 -> Plus
arm_2R 9701748..9701819 3044..3115 100 -> Plus
arm_2R 9692979..9694223 1..1245 100 -> Plus
arm_2R 9694302..9694383 1246..1327 100 -> Plus
arm_2R 9695237..9695341 1328..1432 100 -> Plus
arm_2R 9695404..9695680 1433..1709 100 -> Plus
arm_2R 9696780..9697174 1710..2104 100 -> Plus
arm_2R 9697419..9697868 2105..2554 100 -> Plus
arm_2R 9697984..9698124 2555..2695 100 -> Plus
arm_2R 9698258..9698341 2696..2779 100 -> Plus
arm_2R 9701305..9701385 2780..2860 100 -> Plus
arm_2R 9701446..9701520 2861..2935 100 -> Plus
arm_2R 9701582..9701689 2936..3043 100 -> Plus
arm_2R 9704260..9704484 3926..4150 100 -> Plus
arm_2R 9704572..9705114 4151..4693 100 -> Plus
arm_2R 9705393..9707076 4694..6377 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:10:31 Download gff for SD07723.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13817402..13817512 3556..3666 100 -> Plus
2R 13817585..13817703 3667..3785 100 -> Plus
2R 13817761..13817900 3786..3925 100 -> Plus
2R 13817954..13818178 3926..4150 100 -> Plus
2R 13811952..13812035 2696..2779 100 -> Plus
2R 13814999..13815079 2780..2860 100 -> Plus
2R 13815140..13815214 2861..2935 100 -> Plus
2R 13815276..13815383 2936..3043 100 -> Plus
2R 13815442..13815513 3044..3115 100 -> Plus
2R 13815578..13815780 3116..3318 100 -> Plus
2R 13815843..13815985 3319..3461 100 -> Plus
2R 13816754..13816847 3462..3555 100 -> Plus
2R 13806673..13807917 1..1245 100 -> Plus
2R 13807996..13808077 1246..1327 100 -> Plus
2R 13808931..13809035 1328..1432 100 -> Plus
2R 13809098..13809374 1433..1709 100 -> Plus
2R 13810474..13810868 1710..2104 100 -> Plus
2R 13811113..13811562 2105..2554 100 -> Plus
2R 13811678..13811818 2555..2695 100 -> Plus
2R 13818266..13818808 4151..4693 100 -> Plus
2R 13819087..13820770 4694..6377 100   Plus

SD07723.pep Sequence

Translation from 1129 to 4785

> SD07723.pep
MAWSRLLAWWRLCLGLLSVLVCLAPCVNLQPAENINYNLVHSWADKLGME
LFHLGDFITRRKEVQESFKDAKVVSRNGASIVDSMAKEIEMMMDLKVSAV
RRIMDTAENTALSHQNDMADKMFSYYSAKEMLEPGDPVPPIPTPAPDMDK
DIGEPLIYVQPKVVVLEPRPEFHNTPVNFSVSSVHVPVNVFDRAPDVIKA
IQWSENLDQIFRDNYKNDPTLSWQFFGSSTGFMRQFPASKWRKDVPVDLY
DCRLRSWYMEAATSPKDIVILMDGSGSMLGQRLDIAKHVVNTILDTLGTN
DFVNIFTFDKEVSPVVPCFEDTLIQANLGNIRELKEGIELFRPKSIANYT
AALTKAFELLEETKLSSRGAQCNQAIMIIGDGAPENNREVFELHNWRDPP
YKPVRVFTYLIGKEVANWDDIRWMACENQGYYVHLSDTAEVREMVLNYIP
VMARPLVLGRHDHPVIWSQVYADIEDTKLSDYLWDINQCEYQKADVLEYW
QVHDRMLEPSEMHRRKYRRMKETWNQPVDSNVYQFMTTVSMPIYDRRENA
TRIANILGVAGTDVPINEIKKLLSPFTLGVNGYAFIVTNNGYVLFHPDFR
PIFQGYILKPAYNSVDMIEVELLDDDRPARDFNPVLMTIRDSIINQSTGS
KWMLVKNHFDEMKRVARVKRQYYWTAIKKTPFTLVISYPEQYGVSHMDIR
ADQEIHRISIKGTNLRSVFSGKRWKIHPDWLFCKHSNRTFKTPEIELLYF
LERMSEPGWRWPGSRSAMPPEHAAAMFCDRQLMQALVFDARVTGWFSNNT
SFNSKDDKGNEFKQRFGVTVAFLATHSGLTRWHEFHSNAAEESGVGETFS
QNNTRAIDEIWYKRAVDQHFVREESFVYSVPFDAGESNSEILVTASHAVF
HNEGGKTAPAAVVGFQFQHSALYKLFHNITGNACAVDDKDCYILDNNGYV
IISTRVHETGRFFGEVNGAIMKRLLEENVYRQVTVYDYQAVCFESKNDNN
ASSMLLSPLFHLLRVGKWLLHTALWYIVQLLQWAPGVSSHYADMYGDSND
TEPPPPEPHPDHHARNGNGHGKKDDDHWLRYLTLHRTRLKPCDMKRDLYT
LFNEKDNVVYNMTAHACERPFVVLPIPFSNLILLVIDQLCPRDGSVVLTV
NPQPIDYHLSVNDSLACYKQAREFNRMRPHSCISRHANESGIKLCGKACS
VYANLGLLLLCHILSRWL*

SD07723.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:52:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13711-PA 1219 GF13711-PA 1..1219 1..1218 5978 91.2 Plus
Dana\GF14941-PA 1177 GF14941-PA 17..1151 40..1198 1813 36.9 Plus
Dana\GF14980-PA 1138 GF14980-PA 57..1127 172..1214 1761 36.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:52:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20402-PA 1204 GG20402-PA 1..1204 1..1218 6448 97.8 Plus
Dere\GG25194-PA 2154 GG25194-PA 10..1136 40..1190 1738 36 Plus
Dere\GG24200-PA 1136 GG24200-PA 57..1125 172..1214 1725 36.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21034-PA 1206 GH21034-PA 7..1192 8..1204 5416 84.5 Plus
Dgri\GH10400-PA 1180 GH10400-PA 17..1153 40..1198 1809 36.8 Plus
Dgri\GH13254-PA 1237 GH13254-PA 463..1226 539..1214 1149 36.7 Plus
Dgri\GH13254-PA 1237 GH13254-PA 32..461 33..471 806 36.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:58
Subject Length Description Subject Range Query Range Score Percent Strand
stj-PB 1218 CG12295-PB 1..1218 1..1218 6545 100 Plus
stj-PD 1237 CG12295-PD 1..1237 1..1218 6515 98.5 Plus
stj-PC 1271 CG12295-PC 1..1271 1..1218 6459 95.8 Plus
CG4587-PO 1260 CG4587-PO 32..1249 33..1214 1887 35.4 Plus
CG4587-PN 1260 CG4587-PN 32..1249 33..1214 1887 35.4 Plus
CG4587-PM 1260 CG4587-PM 32..1249 33..1214 1887 35.4 Plus
CG4587-PL 1260 CG4587-PL 32..1249 33..1214 1887 35.4 Plus
CG4587-PK 1260 CG4587-PK 32..1249 33..1214 1887 35.4 Plus
CG4587-PJ 1260 CG4587-PJ 32..1249 33..1214 1887 35.4 Plus
CG4587-PI 1271 CG4587-PI 32..1260 33..1214 1874 35.1 Plus
CG4587-PH 1271 CG4587-PH 32..1260 33..1214 1874 35.1 Plus
CG42817-PB 1215 CG42817-PB 25..1209 16..1218 1839 35.9 Plus
CG42817-PA 1215 CG42817-PA 25..1209 16..1218 1839 35.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18635-PA 1169 GI18635-PA 7..1155 8..1204 5282 81.8 Plus
Dmoj\GI17380-PA 1220 GI17380-PA 57..1193 40..1198 1807 36.5 Plus
Dmoj\GI17296-PA 1099 GI17296-PA 57..1088 172..1214 1756 36.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17474-PA 1104 GL17474-PA 1..1076 1..1147 5125 84.9 Plus
Dper\GL21046-PA 1221 GL21046-PA 59..1195 40..1198 1790 36.6 Plus
Dper\GL15442-PA 1149 GL15442-PA 58..1138 172..1214 1686 35.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:52:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11538-PB 1210 GA11538-PB 1..1210 1..1218 5876 90.5 Plus
Dpse\GA11538-PC 1229 GA11538-PC 1..1229 1..1218 5844 89.1 Plus
Dpse\GA11538-PE 1263 GA11538-PE 1..1263 1..1218 5803 86.7 Plus
Dpse\GA11645-PA 1213 GA11645-PA 51..1187 40..1198 1789 36.6 Plus
Dpse\GA18279-PA 1138 GA18279-PA 58..1127 172..1214 1698 35.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21490-PA 1204 GM21490-PA 1..1204 1..1218 6494 98.5 Plus
Dsec\GM18657-PA 1170 GM18657-PA 10..1164 40..1218 1743 35.8 Plus
Dsec\GM14254-PA 1119 GM14254-PA 57..1108 172..1214 1679 36.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:52:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10984-PA 769 GD10984-PA 102..769 551..1218 3625 99.4 Plus
Dsim\GD21946-PA 1100 GD21946-PA 57..1089 172..1214 1660 35.6 Plus
Dsim\GD24043-PA 706 GD24043-PA 10..295 40..326 577 41 Plus
Dsim\GD10984-PA 769 GD10984-PA 1..104 1..104 535 97.1 Plus
Dsim\GD24043-PA 706 GD24043-PA 371..700 888..1218 313 32.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:52:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21648-PA 1206 GJ21648-PA 7..1192 8..1204 5536 85.5 Plus
Dvir\GJ18056-PA 1217 GJ18056-PA 54..1190 40..1198 1917 36.8 Plus
Dvir\GJ17905-PA 411 GJ17905-PA 58..357 172..471 708 42.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:52:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17856-PA 1208 GK17856-PA 1..1208 1..1218 5793 88.9 Plus
Dwil\GK18111-PA 1209 GK18111-PA 47..1203 40..1218 1795 36.3 Plus
Dwil\GK24276-PA 1252 GK24276-PA 475..1241 538..1214 1151 36.6 Plus
Dwil\GK24276-PA 1252 GK24276-PA 75..473 63..471 767 38.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:52:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12562-PA 1204 GE12562-PA 1..1204 1..1218 6400 96.8 Plus
Dyak\GE21365-PA 1171 GE21365-PA 10..1161 40..1214 1800 36.3 Plus
Dyak\GE19394-PA 1136 GE19394-PA 57..1125 172..1214 1718 36.3 Plus

SD07723.hyp Sequence

Translation from 1129 to 4785

> SD07723.hyp
MAWSRLLAWWRLCLGLLSVLVCLAPCVNLQPAENINYNLVHSWADKLGME
LFHLGDFITRRKEVQESFKDAKVVSRNGASIVDSMAKEIEMMMDLKVSAV
RRIMDTAENTALSHQNDMADKMFSYYSAKEMLEPGDPVPPIPTPAPDMDK
DIGEPLIYVQPKVVVLEPRPEFHNTPVNFSVSSVHVPVNVFDRAPDVIKA
IQWSENLDQIFRDNYKNDPTLSWQFFGSSTGFMRQFPASKWRKDVPVDLY
DCRLRSWYMEAATSPKDIVILMDGSGSMLGQRLDIAKHVVNTILDTLGTN
DFVNIFTFDKEVSPVVPCFEDTLIQANLGNIRELKEGIELFRPKSIANYT
AALTKAFELLEETKLSSRGAQCNQAIMIIGDGAPENNREVFELHNWRDPP
YKPVRVFTYLIGKEVANWDDIRWMACENQGYYVHLSDTAEVREMVLNYIP
VMARPLVLGRHDHPVIWSQVYADIEDTKLSDYLWDINQCEYQKADVLEYW
QVHDRMLEPSEMHRRKYRRMKETWNQPVDSNVYQFMTTVSMPIYDRRENA
TRIANILGVAGTDVPINEIKKLLSPFTLGVNGYAFIVTNNGYVLFHPDFR
PIFQGYILKPAYNSVDMIEVELLDDDRPARDFNPVLMTIRDSIINQSTGS
KWMLVKNHFDEMKRVARVKRQYYWTAIKKTPFTLVISYPEQYGVSHMDIR
ADQEIHRISIKGTNLRSVFSGKRWKIHPDWLFCKHSNRTFKTPEIELLYF
LERMSEPGWRWPGSRSAMPPEHAAAMFCDRQLMQALVFDARVTGWFSNNT
SFNSKDDKGNEFKQRFGVTVAFLATHSGLTRWHEFHSNAAEESGVGETFS
QNNTRAIDEIWYKRAVDQHFVREESFVYSVPFDAGESNSEILVTASHAVF
HNEGGKTAPAAVVGFQFQHSALYKLFHNITGNACAVDDKDCYILDNNGYV
IISTRVHETGRFFGEVNGAIMKRLLEENVYRQVTVYDYQAVCFESKNDNN
ASSMLLSPLFHLLRVGKWLLHTALWYIVQLLQWAPGVSSHYADMYGDSND
TEPPPPEPHPDHHARNGNGHGKKDDDHWLRYLTLHRTRLKPCDMKRDLYT
LFNEKDNVVYNMTAHACERPFVVLPIPFSNLILLVIDQLCPRDGSVVLTV
NPQPIDYHLSVNDSLACYKQAREFNRMRPHSCISRHANESGIKLCGKACS
VYANLGLLLLCHILSRWL*

SD07723.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
stj-PB 1218 CG12295-PB 1..1218 1..1218 6545 100 Plus
stj-PD 1237 CG12295-PD 1..1237 1..1218 6515 98.5 Plus
stj-PC 1271 CG12295-PC 1..1271 1..1218 6459 95.8 Plus
CG4587-PO 1260 CG4587-PO 32..1249 33..1214 1887 35.4 Plus
CG4587-PN 1260 CG4587-PN 32..1249 33..1214 1887 35.4 Plus