Clone SD07763 Report

Search the DGRC for SD07763

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:77
Well:63
Vector:pOT2
Associated Gene/TranscriptalphaTub84D-RA
Protein status:SD07763.pep: gold
Preliminary Size:4306
Sequenced Size:6251

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4898 2001-01-01 Release 2 assignment
CG2512 2001-10-10 Blastp of sequenced clone
alphaTub84D 2008-04-29 Release 5.5 accounting
alphaTub84D 2008-08-15 Release 5.9 accounting
alphaTub84D 2008-12-18 5.12 accounting

Clone Sequence Records

SD07763.complete Sequence

6251 bp (6251 high quality bases) assembled on 2001-10-10

GenBank Submission: AY084208

> SD07763.complete
CGTTAATAAAGCGTTTAATCTTCAATACGTTTTGTTAATGAGCTCGAAAA
AGAGACAGGGAGAGGGTGAGAAAAGGAGAGATGGCTGAAACTCCCGCTAC
AAAACGAAACCCAACTGGAATCCACTCTTCAACTTCTTTGCTTTGCTGCT
CTTCGTTTTTTTATTTTGGATACCCTTGATAAAGGGGTATAACCTAAGCG
TAATTTGACTCTTCTTCAGAACTAATAACAGATCAAGTTCTAACATAAAA
ACGATCAAAACCGATTGATTATCTTTGCACACTCCATTATAACATGGTTC
TTTTTAGACATAAATATCGGTGACTTCAGAATTAGCTCTGTATTGAACTT
TCATAAGGAAATTTTGTACGAATGAATATTTGATTTGGCAAGGGTATATA
AGCTGCGATCTCTGCCTTCACTTTTAATTTGATTTTTTGGCATTTTTTCT
TGTGCTGGCTCTTGGGCTTCATCGGCGGTTTTGTTGTTCGACTTTCGTGT
TTGGAAAGCTGCGTTGCCTGCTCCCCCAATTCGAAATGCTTTTTATCGCT
CATGTGTGTGTATTTTGTACGATGACGTAACCCAACACGGTTGGTTCCAA
TTCATAATCACACGATACTTTAACGACCCGCACTCACATCGTTCATTTGG
TTCTAGGCGTCGTCAGATGGTCAGTGGTTCAATTGTTCAGTTGTTCATTC
GCTCACTTAGTCATTCCATGTACATATCAGTAGCTCTATATCCATCTCTA
TCTCCATGCCCGGCACCATATCAGTCATTGAGCATGGATTTGGACATGGA
CATGGCATGGAACTTAGAACTGGCACCGGACTGCCTTGTCCAATTGCCTT
TGAGCCGTTTACGATTCAAAGTTTGATTCGCCTCTAATTTTATATACTTT
TTTCACCATTTTTGGGCGGGTGCTTACCGCGCTGTTTTCGCTTTTCATCG
TTTTGACGTGCTGTGGCCTCTATAAGGCCATAAAGCAGCGAATATTTTCC
GTTCTTTAATGGGTATAGTATTTTAGACGGTGGGAAAACTCTCGATCAAG
CTTAATCGATGACGTCACGGGCCGTGAACCTTGTATTGGCTTCATTTTTG
GACTTAGTAGCCATATCAGGTAGTGGTGTTGTTGAACTTTTGTTTAACTT
TGATGGCGAGTATCGATTGCATTTAGCCAGCAAAGCAACACGCAATCATT
CCTTCGCTTAAGGGCGTTTTTGGGGGGTTTGCTTTGACCTTGCTTCGACG
ACGGAAACAGCGACAACAACAACAACTACAACGAGGTGGAAAAAGGGAAC
TTTTCTTTACAGGTGGAAGCCGCAACTGAAAATGGGATCAACGGTCGACA
TTTTAGGGAAAAATTAGGTTTACCACTTTAAGTACTATGAACAGGGGGGT
TAAAGAGAGCGCAAATGCAGGAGTGTTTCATCATAGCAGTCTTGTTTTAC
TAAACCGAAATGAGGATAGTATGTTTTTCCAAACCAAGCGTAGCAAATAT
TTATTTATGTGTATTTCTTGCCCCAAAATATTTAAGGTTTAGCACCGTAA
GACGTAAAGTAAACATTAAGATTTTAGCAATAAGTTTACAGCGAATGGAT
ATGCTATATCTGGTTCTTTCGACCATCGAACGTTTGTCTTATAGGCCGAA
TCCGAGGTTGCCGCTCTGAACCGTCGCATCCAGTTGCTCGAAGAAGACTT
GGAGCGCTCTGAGGAGCGTCTGGGCTCCGCCACAGCCAAGCTGTCGGAAG
CCTCTCAGGCCGCCGATGAGAGCGAACGGTTAGTACCACGTTACCATCTA
AAGTCCCTGTCCCCCAACTACCCCATCTATGATCTCCCCCACTGTACCCG
AATATGTAAAATACTTCTTAAGTTCACAGAGAATTATTAAGTTCAAGTTA
CAACATATATATTTTAATCGCATCTGTATATCGTTTCGCAATGCTGCGAC
AAATTCAGGATACGAAAAGCGCTTGAGAATCGCACAAATATGGAAGATGA
CAAAGTAGCTCTCTTGGAGAACCAGTTAGCGCAAGCAAAATTAATTGCAG
AAGAAGCTGATAAGAAATACGAAGAGGTATAGTCTACGAATTCATATAGT
CTACGGAATTTGGTCTCCGTTTTAGGGCATTAGGGTTATTAGGTTCTGCT
CCTTTGAGGTTAGGTTCACTTGGTCAACATTTGCGTTACTAATTAGGTTT
TTGGGTCTATTTAACTATCTGCGCTCTCTATTTTCTAATTTCTACCTAAC
CGACTCTGCAACAACGACAATAATTGTCGTTATAATAATGGTCACTTTTA
TAATGATAACAATAATGATGATGTATCTAAGTTAGCGTGTAAGACTTTCT
GTAAACAGCATTTAGTTGGCACAGTTCAAAGATGTCGACCCGCCGCTGGA
ACTGGAACACCATGGATCTGCTCTGAATTATTGTAAAAACTTTGTAAAAT
TATGTATCAGACAGCATGTCCTACTTAAGCTTATGGTAGTCTATTAGTCA
AATGGCTGTTAAACAATTATGTCTAAAAAAAAAGATGAAAAATCCCCCAG
TGATTGTAATGAGACGAAGGCTAAAGTGTGTTTGGTTCTTGGTCTAAATC
CGTTGGCTTAAATACCTCCCAAAATATCAGCTACCAAATTGGTTGCACGT
CCATTTCGCTTCGAAGAAGCCAAACACAGTTTAAGCCTCTTGCTTAACCC
TTTCCGTCTCCCCTAGTGTCCCCTGCCCCCTGTAAAAACTTGTTAATTAA
GTAGAAGTTCCGAATTGTTAACTCAACTGGCAACAACAAATTTCTGTCTC
TTTTGCAACAACAACCACGACCAACTACAATCAAACTTCAATATTCACAA
ACCAAAAATGTATCTCTCAATGTGAATGTTTGTGTAAAACATCTGTTTGT
CGTAACAATTGCAACAACTACAACAACAACAACCACACTGAACACTCAAC
GATGTGGACGATGACGTCGAATGAATCTCGTGATAACTTTTCGGCTGTAC
CAACTGCAATTCCACTGGGGAACGGCAAATCATCGCTAACCACTTGGTCA
CTGTCTTCTATGGGCATGGTCGTCGCAACCGATGGGGTCTATATACTCTA
CCATCCACACTATATTATATAGTGCTCGCAAAATTCTTGAGAACCGCGCC
CTTGCCGATGAAGAACGCATGGACGCTCTCGAGAATCAGCTGAAGGAAGC
GCGTTTCCTTGCTGAGGAGGCTGACAAGAAATACGATGAGGTGCAGCTAA
AAACCAATTTGTCTTCTATTAAGCTAAGCAACAATAACAACAACAGTAAC
AGTAACAATATTGAAATCAGTAAATCAGAATCATGCAATGCCAGCGATAT
TGGTGGCACCAACAACAATAACGCATCCAGAACTATTGCATCTGCTGCTG
TTGGTGAAGAGACTTCCACCTTGTCCTCCACAAGCCACGAACACAACAAC
AATCCCAACAACGACACCTGATCTGGTTCCTTTGTCAAGCGGATATTAAA
GTAACTTGAATTTGAATTGAATGATTGATAAAGGGTTAACCGAAACCCGA
ATCTTGGCACAGGAATCAGCCAGTGCGTTGATGCAAAACTTGTGCTTACC
ACGACGATTACGAATGATGCTTGAGGGCAGTTAGAGCTTAGATCTAGACC
TAGATCATGCACAGCCCGCCCGCCCGCCTGACCATATGCAATATATATAC
GTGTATAGATTATGACGATGATAATGATGATGATAATGATGATGTATTAG
TCGATGTACATATGTACAATGTAAATCCAATCCAATGAACTTTCGATTGT
AATGGAGTTTCGTGTGTATTTTAATGTGTAAAATACCAATGGCAATATGT
AAAGTAATTGTTAAGCGGTCCATACAATGTCCACAAGTACTCTATTAATT
GTCCTCAATGCTCTTCCACGTCAAAAAGCTTGAGAAGCATATCGCCACTG
AAAATTGATTGTTAAAAGTAAATCGTAATTGGGTTAGTTTCTTAAATTGT
TCTTTTTATTTCCATTCAATTTCCAATTACATAATTGTAAAGAAAATGTA
ATTTATACTCACGTTAAATGCATAGAGAAACACACCTTAAGTTTAAAATT
AACCTGTAGTTAATTAGAATTCCAATACTTCTGATGTAGTTAATAAAGTC
TCAAAACGCAGTTGGTCATTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAACTCGAGACCTCGTGCCGAATTCGGCACGAGGC
GTGCTTGTGCTAAATAATTTTACTGATCTTTAAATCTCGTAAATACCGCC
ATTTAGCCGCATCTGAACACTCTTGCCGATGGTAATCAATTATTGGCCAA
GAGCTAGCAATGTTGTGTAAAAATCAGCGTGAAACTAAAGCCGAATTCAA
ACAAACAAACCAAAAAGCGGCCTGACAGGGTTTTTCGTGCCCCCAGAGCA
AAATCGATTGGTAAAAGAAACGCGTTTCGTATAATATAGATAGTTATCTA
ATATCTAATCTAATATCTGAGTTGTTGTGAAGCCCTTTTTCGTAAAACAG
AGCTACTGGCGATTTACGTCTGTTCGAAATCCATTCCCGGGCATTCCAAC
GTATACGCCCGCAGAGTCAGACCCCAAAATCCGTAGGCTTACACTTTTTC
CGTTGATTTTCCGTAGTCGCGTGTGAGAAACCGAAACTCGAAACAAGAAA
CCCGGAATCGGAAACCCCATTAAAAATCAATATGCGCGAATGTATCTCTA
TCCACGTGGGCCAGGCCGGAGTCCAGATTGGAAATGCCTGCTGGGAGCTC
TATTGCCTGGAGCACGGCATCCAGCCCGATGGCCAGATGCCCTCCGACAA
GACCGTAGGCGGAGGTGATGACTCGTTTAACACCTTCTTCAGCGAGACTG
GAGCTGGCAAGCACGTGCCTCGCGCCGTGTTCGTGGATCTGGAGCCCACT
GTGGTCGACGAGGTCCGTACTGGAACCTACCGTCAGCTGTTCCACCCCGA
GCAACTGATCACCGGTAAGGAGGATGCGGCCAACAACTACGCCCGTGGCC
ACTACACCATTGGCAAGGAGATCGTCGACCTGGTGCTGGACAGGATCCGC
AAGCTGGCCGATCAATGCACCGGTCTGCAGGGCTTCCTCATCTTCCACTC
GTTCGGTGGAGGTACCGGCTCCGGCTTCACCTCGCTGCTGATGGAGCGTC
TCTCCGTGGACTACGGCAAGAAGTCCAAGCTGGAGTTCGCCGTGTACCCA
GCTCCGCAGGTGTCCACCGCCGTGGTGGAGCCCTACAACTCCATCCTAAC
CACGCACACCACCCTCGAGCACTCCGACTGCGCCTTTATGGTGGACAACG
AGGCCATCTACGACATCTGTCGCCGAAACCTGGACATCGAACGACCCACT
TACACTAACCTGAATCGTTTAATCGGCCAAATAGTGTCCTCGATCACCGC
CTCTCTGCGATTCGATGGAGCCCTAAATGTGGACCTCACCGAGTTCCAGA
CCAACCTGGTTCCTTACCCCCGCATCCACTTCCCGCTGGTGACGTACGCT
CCCGTCATCTCCGCCGAGAAGGCCTACCACGAGCAGCTGTCGGTGGCCGA
GATCACCAACGCCTGCTTCGAGCCAGCCAACCAGATGGTCAAGGTGGATC
CCCGTCACGGCAAGTACATGGCCTGCTGCATGCTGTATCGCGGCGATGTG
GTGCCCAAGGACGTGAACGCCGCCATCGCCACCATCAAGACAAAGCGTAC
CATTCAGTTCGTGGACTGGTGCCCCACCGGCTTCAAGGTGGGCATCAACT
ACCAGCCACCCACTGTCGTCCCAGGCGGGGATCTGGCCAAGGTGCAGCGT
GCCGTGTGCATGTTGTCCAATACCACGGCTATTGCCGAGGCCTGGGCCCG
TCTGGACCACAAGTTCGATCTGATGTACGCCAAGAGGGCCTTCGTCCACT
GGTATGTTGGTGAGGGCATGGAGGAGGGCGAGTTCTCCGAGGCCCGTGAG
GATCTGGCTGCCCTCGAGAAGGACTACGAGGAGGTCGGCATGGATTCCGG
TGACGGTGAGGGCGAGGGTGCTGAGGAGTACTAGAGCGGATAGGTGTGCA
TCCCTCAAAATCTTGCTTATTTTCATACGCTCCCACTCGCATGTATAAAT
TTTCTGCGATAATGTATAGCGAACAAAGAAGAAAATAAAAACCCAAGAAA
ACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
A

SD07763.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
alphaTub84D-RA 2497 alphaTub84D-RA 122..2080 4249..6207 9795 100 Plus
alphaTub84D-RB 2291 alphaTub84D-RB 333..1874 4666..6207 7710 100 Plus
Tm1-RH 3054 Tm1-RH 1965..2947 3122..4104 4915 100 Plus
alphaTub84D-RB 2291 alphaTub84D-RB 122..333 4249..4460 1060 100 Plus
Tm1-RH 3054 Tm1-RH 1831..1965 1644..1778 675 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:23:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11118105..11122206 1..4104 20365 99.8 Plus
chr3R 27901430 chr3R 3356852..3358808 4249..6205 9785 100 Plus
chr3R 27901430 chr3R 2913260..2914609 4734..6083 5175 92.2 Plus
chr3R 27901430 chr3R 5557189..5557979 6048..5258 2425 87.1 Minus
chr3R 27901430 chr3R 5558123..5558616 5252..4759 1570 87.9 Minus
chr3L 24539361 chr3L 9674066..9675105 4999..6038 1075 73.6 Plus
chr3L 24539361 chr3L 2966507..2966576 4174..4105 350 100 Minus
chr3L 24539361 chr3L 2973431..2973500 4174..4105 350 100 Minus
chr3R 27901430 chr3R 17584931..17584998 4103..4170 340 100 Plus
chrX 22417052 chrX 21554777..21554843 4170..4104 335 100 Minus
chrX 22417052 chrX 21566350..21566416 4104..4170 335 100 Plus
chrU 10048995 chrU 6365339..6365405 4170..4104 335 100 Minus
chr2R 21145070 chr2R 6514785..6514851 4104..4170 335 100 Plus
chr2R 21145070 chr2R 20621234..20621300 4170..4104 335 100 Minus
chr2L 23010047 chr2L 4600884..4600950 4104..4170 335 100 Plus
chr3R 27901430 chr3R 17591826..17591891 4105..4170 330 100 Plus
chr3L 24539361 chr3L 19106653..19106718 4105..4170 330 100 Plus
chr3L 24539361 chr3L 19113601..19113666 4105..4170 330 100 Plus
chr3L 24539361 chr3L 932376..932441 4170..4105 330 100 Minus
chr3L 24539361 chr3L 925449..925514 4170..4105 330 100 Minus
chrX 22417052 chrX 2738786..2738851 4105..4170 330 100 Plus
chrX 22417052 chrX 2745697..2745762 4105..4170 330 100 Plus
chrX 22417052 chrX 21552512..21552577 4105..4170 330 100 Plus
chrX 22417052 chrX 21558839..21558904 4105..4170 330 100 Plus
chrU 10048995 chrU 6715411..6715476 4105..4170 330 100 Plus
chrU 10048995 chrU 8363243..8363308 4170..4105 330 100 Minus
chrU 10048995 chrU 9091526..9091591 4105..4170 330 100 Plus
chr2R 21145070 chr2R 6510371..6510436 4170..4105 330 100 Minus
chr2R 21145070 chr2R 6517736..6517801 4170..4105 330 100 Minus
chr2R 21145070 chr2R 6524637..6524702 4170..4105 330 100 Minus
chr2R 21145070 chr2R 6547213..6547278 4170..4105 330 100 Minus
chr2R 21145070 chr2R 15802064..15802129 4105..4170 330 100 Plus
chr2R 21145070 chr2R 15808977..15809042 4105..4170 330 100 Plus
chr2R 21145070 chr2R 20614225..20614290 4170..4105 330 100 Minus
chr2L 23010047 chr2L 4607827..4607892 4105..4170 330 100 Plus
chr3RHet 2517486 chr3RHet 1982289..1982354 4105..4170 330 100 Plus
chr3RHet 2517486 chr3RHet 1989200..1989265 4105..4170 330 100 Plus
chr2R 21145070 chr2R 6554174..6554237 4170..4107 320 100 Minus
chr3R 27901430 chr3R 5664365..5664430 4170..4105 315 98.5 Minus
chr3R 27901430 chr3R 5671288..5671353 4170..4105 315 98.5 Minus
chr3R 27901430 chr3R 23997049..23997114 4170..4105 315 98.5 Minus
chr3R 27901430 chr3R 24003980..24004045 4170..4105 315 98.5 Minus
chrU 10048995 chrU 6568983..6569048 4170..4105 315 98.5 Minus
chrU 10048995 chrU 9759088..9759153 4105..4170 315 98.5 Plus
chr2R 21145070 chr2R 187750..187815 4105..4170 315 98.5 Plus
chr2R 21145070 chr2R 194680..194745 4105..4170 315 98.5 Plus
chr2R 21145070 chr2R 267404..267469 4170..4105 315 98.5 Minus
chr2R 21145070 chr2R 274382..274447 4170..4105 315 98.5 Minus
chrX 22417052 chrX 17446727..17446788 4170..4109 310 100 Minus
chrX 22417052 chrX 21562287..21562353 4170..4105 285 98.5 Minus
chrX 22417052 chrX 21569730..21569796 4170..4105 285 98.5 Minus
chrU 10048995 chrU 6700016..6700082 4105..4170 285 98.5 Plus
chrU 10048995 chrU 8874904..8874970 4105..4170 285 98.5 Plus
chr2L 23010047 chr2L 3209288..3209354 4105..4170 285 98.5 Plus
chr3RHet 2517486 chr3RHet 2047901..2047967 4105..4170 285 98.5 Plus
chr3RHet 2517486 chr3RHet 2054947..2055013 4105..4170 285 98.5 Plus
chr3L 24539361 chr3L 17720530..17720596 4105..4170 270 97 Plus
chr2R 21145070 chr2R 10902763..10902829 4105..4170 270 97 Plus
chr2R 21145070 chr2R 10909687..10909753 4105..4170 270 97 Plus
chr2L 23010047 chr2L 3202365..3202425 4111..4170 255 98.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:51:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:23:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15293469..15297572 1..4104 20520 100 Plus
3R 32079331 3R 7530776..7532734 4249..6207 9795 100 Plus
3R 32079331 3R 7087233..7088582 4734..6083 5175 92.2 Plus
3R 32079331 3R 9731362..9732152 6048..5258 2425 87.1 Minus
3R 32079331 3R 9732286..9732779 5252..4759 1570 87.9 Minus
3L 28110227 3L 9682200..9683239 4999..6038 1060 73.5 Plus
3L 28110227 3L 2967151..2967220 4174..4105 350 100 Minus
3L 28110227 3L 2974075..2974144 4174..4105 350 100 Minus
3R 32079331 3R 21761175..21761242 4103..4170 340 100 Plus
X 23542271 X 17557374..17557441 4170..4103 340 100 Minus
X 23542271 X 21689619..21689685 4170..4104 335 100 Minus
X 23542271 X 21701192..21701258 4104..4170 335 100 Plus
U 3151297 U 2859928..2859994 4170..4104 335 100 Minus
Y 3667352 Y 1919364..1919430 4104..4170 335 100 Plus
2R 25286936 2R 10627197..10627263 4104..4170 335 100 Plus
2R 25286936 2R 24735324..24735390 4170..4104 335 100 Minus
2L 23513712 2L 4601758..4601824 4104..4170 335 100 Plus
3R 32079331 3R 3498897..3498962 4170..4105 330 100 Minus
3R 32079331 3R 3505804..3505869 4170..4105 330 100 Minus
3R 32079331 3R 21768070..21768135 4105..4170 330 100 Plus
3L 28110227 3L 925607..925672 4170..4105 330 100 Minus
3L 28110227 3L 932534..932599 4170..4105 330 100 Minus
3L 28110227 3L 19117098..19117163 4105..4170 330 100 Plus
3L 28110227 3L 19124046..19124111 4105..4170 330 100 Plus
X 23542271 X 2844955..2845020 4105..4170 330 100 Plus
X 23542271 X 2851866..2851931 4105..4170 330 100 Plus
X 23542271 X 21687354..21687419 4105..4170 330 100 Plus
X 23542271 X 21693681..21693746 4105..4170 330 100 Plus
U 3151297 U 1323565..1323630 4105..4170 330 100 Plus
Y 3667352 Y 1926318..1926383 4105..4170 330 100 Plus
Y 3667352 Y 2388052..2388117 4170..4105 330 100 Minus
Y 3667352 Y 2394980..2395045 4170..4105 330 100 Minus
2R 25286936 2R 10622783..10622848 4170..4105 330 100 Minus
2R 25286936 2R 10630148..10630213 4170..4105 330 100 Minus
2R 25286936 2R 10637049..10637114 4170..4105 330 100 Minus
2R 25286936 2R 10659628..10659693 4170..4105 330 100 Minus
2R 25286936 2R 10666589..10666654 4170..4105 330 100 Minus
2R 25286936 2R 19914900..19914965 4105..4170 330 100 Plus
2R 25286936 2R 19921813..19921878 4105..4170 330 100 Plus
2R 25286936 2R 24728315..24728380 4170..4105 330 100 Minus
2L 23513712 2L 4608701..4608766 4105..4170 330 100 Plus
Ymm 880023 Ymm 612404..612469 4170..4105 330 100 Minus
Xmm 1049845 Xmm 255665..255730 4105..4170 330 100 Plus
3R 32079331 3R 9838539..9838604 4170..4105 315 98.5 Minus
3R 32079331 3R 9845462..9845527 4170..4105 315 98.5 Minus
3R 32079331 3R 28174101..28174166 4170..4105 315 98.5 Minus
3R 32079331 3R 28181032..28181097 4170..4105 315 98.5 Minus
Y 3667352 Y 2496425..2496490 4170..4105 315 98.5 Minus
Y 3667352 Y 2503353..2503418 4170..4105 315 98.5 Minus
Y 3667352 Y 2779193..2779258 4170..4105 315 98.5 Minus
Y 3667352 Y 2786103..2786168 4170..4105 315 98.5 Minus
2R 25286936 2R 4300195..4300260 4105..4170 315 98.5 Plus
2R 25286936 2R 4307125..4307190 4105..4170 315 98.5 Plus
2R 25286936 2R 4379830..4379895 4170..4105 315 98.5 Minus
2R 25286936 2R 4386808..4386873 4170..4105 315 98.5 Minus
Ymm 880023 Ymm 607207..607272 4105..4170 315 98.5 Plus
2L 23513712 2L 3202793..3202860 4104..4170 290 98.5 Plus
3R 32079331 3R 3433147..3433213 4170..4105 285 98.5 Minus
3R 32079331 3R 3440194..3440260 4170..4105 285 98.5 Minus
X 23542271 X 21697129..21697195 4170..4105 285 98.5 Minus
X 23542271 X 21704572..21704638 4170..4105 285 98.5 Minus
U 3151297 U 2993058..2993124 4105..4170 285 98.5 Plus
U 3151297 U 1237838..1237904 4105..4170 285 98.5 Plus
2L 23513712 2L 3209723..3209789 4105..4170 285 98.5 Plus
3L 28110227 3L 17730906..17730972 4105..4170 270 97 Plus
2R 25286936 2R 15015512..15015578 4105..4170 270 97 Plus
2R 25286936 2R 15022436..15022502 4105..4170 270 97 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:17:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 15034300..15038403 1..4104 20520 100 Plus
3R 31820162 3R 7271607..7273565 4249..6207 9795 100 Plus
3R 31820162 3R 6828064..6829413 4734..6083 5175 92.2 Plus
3R 31820162 3R 9472193..9472983 6048..5258 2425 87.1 Minus
3R 31820162 3R 9473117..9473610 5252..4759 1570 87.8 Minus
3L 28103327 3L 9675427..9675671 5126..5370 475 79.5 Plus
3L 28103327 3L 2974075..2974144 4174..4105 350 100 Minus
3L 28103327 3L 2967151..2967220 4174..4105 350 100 Minus
3L 28103327 3L 9675906..9676103 5605..5802 345 78.2 Plus
3R 31820162 3R 21502006..21502073 4103..4170 340 100 Plus
X 23527363 X 17565472..17565539 4170..4103 340 100 Minus
2R 25260384 2R 10628396..10628462 4104..4170 335 100 Plus
2R 25260384 2R 24736523..24736589 4170..4104 335 100 Minus
X 23527363 X 21686284..21686350 4104..4170 335 100 Plus
X 23527363 X 21674711..21674777 4170..4104 335 100 Minus
Y 3410481 Y 2018473..2018539 4104..4170 335 100 Plus
2L 23513712 2L 4601758..4601824 4104..4170 335 100 Plus
3R 31820162 3R 21508901..21508966 4105..4170 330 100 Plus
3R 31820162 3R 3167242..3167307 4170..4105 330 100 Minus
3R 31820162 3R 3160335..3160400 4170..4105 330 100 Minus
2R 25260384 2R 19923012..19923077 4105..4170 330 100 Plus
2R 25260384 2R 19916099..19916164 4105..4170 330 100 Plus
2R 25260384 2R 24729514..24729579 4170..4105 330 100 Minus
2R 25260384 2R 10667788..10667853 4170..4105 330 100 Minus
2R 25260384 2R 10660827..10660892 4170..4105 330 100 Minus
2R 25260384 2R 10638248..10638313 4170..4105 330 100 Minus
2R 25260384 2R 10631347..10631412 4170..4105 330 100 Minus
2R 25260384 2R 10623982..10624047 4170..4105 330 100 Minus
3L 28103327 3L 19117146..19117211 4105..4170 330 100 Plus
3L 28103327 3L 19110198..19110263 4105..4170 330 100 Plus
3L 28103327 3L 932534..932599 4170..4105 330 100 Minus
3L 28103327 3L 925607..925672 4170..4105 330 100 Minus
X 23527363 X 21678773..21678838 4105..4170 330 100 Plus
X 23527363 X 21672446..21672511 4105..4170 330 100 Plus
X 23527363 X 2859964..2860029 4105..4170 330 100 Plus
X 23527363 X 2853053..2853118 4105..4170 330 100 Plus
Y 3410481 Y 2487161..2487226 4170..4105 330 100 Minus
Y 3410481 Y 2025427..2025492 4105..4170 330 100 Plus
Y 3410481 Y 2494089..2494154 4170..4105 330 100 Minus
2L 23513712 2L 4608701..4608766 4105..4170 330 100 Plus
Unimproved_211000022278544_374_1527 1153 Unimproved_211000022278544_374_1527 769..834 4105..4170 330 100 Plus
3R 31820162 3R 27921863..27921928 4170..4105 315 98.4 Minus
3R 31820162 3R 27914932..27914997 4170..4105 315 98.4 Minus
3R 31820162 3R 9586293..9586358 4170..4105 315 98.4 Minus
3R 31820162 3R 9579370..9579435 4170..4105 315 98.4 Minus
2R 25260384 2R 4381029..4381094 4170..4105 315 98.4 Minus
2R 25260384 2R 4308324..4308389 4105..4170 315 98.4 Plus
2R 25260384 2R 4301394..4301459 4105..4170 315 98.4 Plus
2R 25260384 2R 4388007..4388072 4170..4105 315 98.4 Minus
Y 3410481 Y 2714304..2714369 4170..4105 315 98.4 Minus
Y 3410481 Y 2707394..2707459 4170..4105 315 98.4 Minus
Unmapped_scaffold_03 170808 Unmapped_scaffold_03 7133..7198 4170..4105 315 98.4 Minus
Unmapped_scaffold_03 170808 Unmapped_scaffold_03 205..270 4170..4105 315 98.4 Minus
2L 23513712 2L 3202793..3202860 4104..4170 300 98.5 Plus
3R 31820162 3R 3101632..3101698 4170..4105 295 98.5 Minus
3R 31820162 3R 3094585..3094651 4170..4105 295 98.5 Minus
X 23527363 X 21682221..21682287 4170..4105 295 98.5 Minus
X 23527363 X 21689664..21689730 4170..4105 295 98.5 Minus
2L 23513712 2L 3209723..3209789 4105..4170 295 98.5 Plus
3L 28103327 3L 9676210..9676339 5909..6038 290 81.5 Plus
2R 25260384 2R 15023635..15023701 4105..4170 280 97 Plus
2R 25260384 2R 15016711..15016777 4105..4170 280 97 Plus
3L 28103327 3L 17724006..17724072 4105..4170 280 97 Plus
3L 28103327 3L 9675711..9675870 5410..5569 230 76.2 Plus
3L 28103327 3L 9675300..9675371 4999..5070 180 83.3 Plus
3L 28103327 3L 9675013..9675089 4745..4821 160 80.5 Plus
Blast to na_te.dros performed 2019-03-15 23:23:32
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 377..444 4170..4103 313 95.6 Minus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 7415..7480 4170..4105 312 97 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2375..2507 3270..3400 165 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2329..2523 3277..3468 158 58 Plus
412 7567 412 412 7567bp 1721..1802 4140..4222 151 66.3 Plus
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 4329..4512 4018..4205 131 56.5 Plus
transib3 2883 transib3 TRANSIB3 2883bp 334..393 1284..1228 122 70 Minus

SD07763.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:24:30 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11118105..11122210 1..4109 97 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 21:03:41 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
alphaTub84D-RB 1..1353 4732..6084 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:57:58 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
alphaTub84D-RB 1..1353 4732..6084 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:26:40 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
alphaTub84D-RA 1..1353 4732..6084 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:41:01 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
alphaTub84D-RB 1..1353 4732..6084 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:32:27 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
alphaTub84D-RA 1..1353 4732..6084 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:12:16 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
alphaTub84D-RA 118..2078 4244..6205 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:57:57 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
alphaTub84D-RA 118..2078 4244..6205 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:26:40 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
alphaTub84D-RA 20..1980 4244..6205 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:41:01 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
alphaTub84D-RA 118..2078 4244..6205 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:32:27 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
alphaTub84D-RA 20..1980 4244..6205 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:24:30 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15293469..15297576 1..4109 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:24:30 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15293469..15297576 1..4109 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:24:30 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15293469..15297576 1..4109 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:26:40 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11119191..11123298 1..4109 99 == Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:24:09 Download gff for SD07763.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15034300..15038407 1..4109 99 == Plus

SD07763.hyp Sequence

Translation from 3081 to 3470

> SD07763.hyp
MGSIYSTIHTILYSARKILENRALADEERMDALENQLKEARFLAEEADKK
YDEVQLKTNLSSIKLSNNNNNSNSNNIEISKSESCNASDIGGTNNNNASR
TIASAAVGEETSTLSSTSHEHNNNPNNDT*

SD07763.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
Tm1-PC 441 CG4898-PC 327..441 15..129 576 100 Plus
Tm1-PI 441 CG4898-PI 327..441 15..129 576 100 Plus
Tm1-PH 678 CG4898-PH 564..678 15..129 576 100 Plus
Tm1-PO 285 CG4898-PO 126..194 15..83 199 63.8 Plus
Tm1-PM 285 CG4898-PM 126..194 15..83 199 63.8 Plus

SD07763.pep Sequence

Translation from 4731 to 6083

> SD07763.pep
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGGGDDSFN
TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAA
NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFT
SLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDC
AFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNV
DLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKVDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTG
FKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEEY
*

SD07763.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17649-PA 450 GF17649-PA 1..450 1..450 2428 99.6 Plus
Dana\GF11529-PA 449 GF11529-PA 1..449 1..450 2254 95.3 Plus
Dana\GF25153-PA 462 GF25153-PA 1..453 1..442 1727 69.1 Plus
Dana\GF16752-PA 452 GF16752-PA 6..451 3..443 1257 52 Plus
Dana\GF12605-PA 447 GF12605-PA 1..424 1..434 894 40.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:54:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14119-PA 450 GG14119-PA 1..450 1..450 2435 100 Plus
Dere\GG13808-PA 450 GG13808-PA 1..450 1..450 2428 99.6 Plus
Dere\GG17337-PA 449 GG17337-PA 1..449 1..450 2247 94.9 Plus
Dere\GG15399-PA 462 GG15399-PA 1..457 1..449 1727 69.1 Plus
Dere\GG22615-PA 455 GG22615-PA 6..436 3..435 1261 53.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19001-PA 450 GH19001-PA 1..450 1..450 2428 99.6 Plus
Dgri\GH22334-PA 455 GH22334-PA 8..454 2..448 2248 95.1 Plus
Dgri\GH16316-PA 460 GH16316-PA 1..450 1..439 1679 68.5 Plus
Dgri\GH15056-PA 449 GH15056-PA 6..449 3..443 1208 52 Plus
Dgri\GH20203-PA 447 GH20203-PA 1..424 1..434 894 40.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:20
Subject Length Description Subject Range Query Range Score Percent Strand
alphaTub84D-PA 450 CG2512-PA 1..450 1..450 2387 100 Plus
alphaTub84B-PA 450 CG1913-PA 1..450 1..450 2381 99.6 Plus
alphaTub85E-PA 449 CG9476-PA 1..449 1..450 2272 94.9 Plus
alphaTub67C-PA 462 CG8308-PA 1..456 1..445 1726 69.1 Plus
CG7794-PA 455 CG7794-PA 6..436 3..435 1270 53.6 Plus
betaTub56D-PB 447 CG9277-PB 1..439 1..449 940 40.1 Plus
betaTub97EF-PB 457 CG4869-PB 1..439 1..449 935 39.2 Plus
betaTub85D-PA 446 CG9359-PA 1..439 1..449 923 39.6 Plus
betaTub97EF-PC 457 CG4869-PC 1..439 1..449 923 39 Plus
betaTub60D-PA 454 CG3401-PA 1..439 1..443 907 38.8 Plus
betaTub60D-PB 453 CG3401-PB 1..438 1..443 905 38.6 Plus
betaTub56D-PA 456 CG9277-PA 30..448 21..449 896 39.6 Plus
CG32396-PA 462 CG32396-PA 1..437 1..446 763 34.7 Plus
gammaTub23C-PA 475 CG3157-PA 4..441 3..433 609 32.1 Plus
gammaTub37C-PB 457 CG17566-PB 4..437 3..433 590 31.2 Plus
gammaTub37C-PA 457 CG17566-PA 4..437 3..433 590 31.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23057-PA 450 GI23057-PA 1..450 1..450 2428 99.6 Plus
Dmoj\GI23620-PA 414 GI23620-PA 1..413 36..448 2064 95.4 Plus
Dmoj\GI13261-PA 461 GI13261-PA 1..450 1..439 1657 68 Plus
Dmoj\GI23711-PA 452 GI23711-PA 6..435 3..435 1245 52.9 Plus
Dmoj\GI20729-PA 447 GI20729-PA 1..424 1..434 894 40.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12416-PA 1216 GL12416-PA 768..1216 2..450 2458 99.6 Plus
Dper\GL12714-PA 464 GL12714-PA 1..461 1..450 1713 68.5 Plus
Dper\GL12586-PA 458 GL12586-PA 6..458 3..448 1261 51.4 Plus
Dper\GL16725-PA 447 GL16725-PA 1..424 1..434 894 40.6 Plus
Dper\GL13671-PA 445 GL13671-PA 1..423 1..434 826 39.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15128-PA 450 GA15128-PA 1..450 1..450 2428 99.6 Plus
Dpse\GA20973-PA 464 GA20973-PA 1..461 1..450 1713 68.5 Plus
Dpse\GA20592-PA 458 GA20592-PA 6..458 3..448 1261 51.4 Plus
Dpse\GA27086-PB 455 GA27086-PB 1..439 1..449 901 39 Plus
Dpse\GA27686-PA 447 GA27686-PA 1..424 1..434 894 40.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10965-PA 450 GM10965-PA 1..450 1..450 2434 99.8 Plus
Dsec\GM10931-PA 450 GM10931-PA 1..450 1..450 2428 99.6 Plus
Dsec\GM26223-PA 449 GM26223-PA 1..449 1..450 2247 94.9 Plus
Dsec\GM25175-PA 462 GM25175-PA 1..457 1..449 1725 68.9 Plus
Dsec\GM15273-PA 455 GM15273-PA 6..436 3..435 1269 53.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19940-PA 450 GD19940-PA 1..450 1..450 2434 99.8 Plus
Dsim\GD19909-PA 450 GD19909-PA 1..450 1..450 2428 99.6 Plus
Dsim\GD20767-PA 449 GD20767-PA 1..449 1..450 2247 94.9 Plus
Dsim\GD14204-PA 462 GD14204-PA 1..457 1..449 1725 68.9 Plus
Dsim\GD19196-PA 455 GD19196-PA 6..436 3..435 1269 53.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24568-PA 450 GJ24568-PA 1..450 1..450 2428 99.6 Plus
Dvir\GJ11156-PA 414 GJ11156-PA 1..413 36..448 2062 95.2 Plus
Dvir\GJ12031-PA 460 GJ12031-PA 1..450 1..439 1665 68.2 Plus
Dvir\GJ23270-PA 450 GJ23270-PA 6..435 3..435 1261 53.6 Plus
Dvir\GJ20466-PA 447 GJ20466-PA 1..424 1..434 894 40.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12743-PA 450 GK12743-PA 1..450 1..450 2428 99.6 Plus
Dwil\GK14362-PA 449 GK14362-PA 1..448 1..448 2354 96.4 Plus
Dwil\GK16627-PA 462 GK16627-PA 1..446 1..435 1694 70.2 Plus
Dwil\GK11238-PA 456 GK11238-PA 6..449 3..449 1273 52.8 Plus
Dwil\GK15706-PA 447 GK15706-PA 1..424 1..434 894 40.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24934-PA 450 GE24934-PA 1..450 1..450 2435 100 Plus
Dyak\alphaTub84B-PA 450 GE24900-PA 1..450 1..450 2428 99.6 Plus
Dyak\GE24741-PA 449 GE24741-PA 1..449 1..450 2247 94.9 Plus
Dyak\GE20865-PA 462 GE20865-PA 1..457 1..449 1725 69.3 Plus
Dyak\GE25507-PA 455 GE25507-PA 6..436 3..435 1262 53.8 Plus