BDGP Sequence Production Resources |
Search the DGRC for SD08175
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 81 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | Bgb-RA |
Protein status: | SD08175.pep: gold |
Preliminary Size: | 1484 |
Sequenced Size: | 1271 |
Gene | Date | Evidence |
---|---|---|
CG7959 | 2001-01-01 | Release 2 assignment |
CG7959 | 2001-09-19 | Blastp of sequenced clone |
CG7959 | 2003-01-01 | Sim4 clustering to Release 3 |
Bgb | 2008-04-29 | Release 5.5 accounting |
Bgb | 2008-08-15 | Release 5.9 accounting |
Bgb | 2008-12-18 | 5.12 accounting |
1271 bp (1271 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058784
> SD08175.complete CCGCGTCAGTTGGTATATCAAAACCGCAAACCAACCTTTTTGTTGTATTG TGCGTTGTTTTTTTCGACGGAGGCGAGAAATTTAAACAATTAGCATTCAG AGTGCTAAGATACAAGAGCTTATTGTGTATACGCAGAAGGCTCGTCGAAG GAGCGACCAAAAGAAACCCATCCAGGGTACCGAGTTCCAGGGATTATTGT GTGCACGCAGCGGTCTGCAGAAGCACCCATAGAAACATACCCTATTCAGC GTTCCATCGAGCGGACGAATCGCGAAAACCCGTTAAAATGATGAACGAGG CGGCACTTGCCAATATGATACCCTACGACACCATCGGATTGTATGAACAG CCAAAGCCGCGCTTCATCTTCAAGATGCCTCGTGTGGTCCCGGACCAGAA GTCCAAGTTCGAGAGCGACGAACTTTTCCGGAGGCTCAGTCGGGAGAGCG AGGTTCGGTACACGGGCTATCGGGAACGAAGCATCGAGGAGCGGCAGGTG CGCTTCATGAACGGATGTCGCGAAGGACACACGGAGGCCAGCTTCGTGGC ATCGGGCACCAATCTGCAGCTGGTGTTCAACGCCAACCAGAACCCGTACC TGCACGACAAGGAGTGCGACTTTGACAAGGAGCACGGCAAGGTGCACATC AAGTCCTACTTTATCATGAACGGGGTTTGTGTCCGGTTCCGTGGATGGAT AGACCTGGAACGACTGGACGGAGTTGGCTGTCTGGAGTATGACGAGCGGC GCGCCATGCACGAGGACGCCATTCTGCGGGATCAGATCGATCGCTACAAC CAGCGACTGCGTGAGTTCGAGGACACTAAGCGCGCCTACCGTGACAATCG ACAGGACGAGATGGAGGCAGTGCGACGGGGCGTGGCCTCCGGAGGCATTG GCGTTGGCGCCAGCATGTGGCGTCGTTAGTTGGACCTGTGGACGGCTCCT GGGCCGTCCCATCCGCAGCTGCCTCCCCAGCAGCAGCAGACGCATCACCA GCAGTTAGAGACTCAATTCGCGAATACTCAATATTTCATGGACAACTGAG AATGCTCCGAACCCCTTAAGAGGGCTTTCACTTGAGAGATTTCAATACGA TTACGTTAGACACGCTCGAATAATTATGCTCCTAGATTAGTGTTAGATGT AATGCTTACTTTACGTATGCTTTTATGGTATTATACTTACAACTTAGTGT GAAATTAGTGTCGTATCTTTAACTAAAATACATAATTACTAATCTAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 1639304..1640548 | 1..1245 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bgb-RA | 1..642 | 288..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bgb-RA | 1..642 | 288..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bgb-RB | 1..762 | 288..1049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bgb-RA | 1..642 | 288..929 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bgb-RB | 1..762 | 288..1049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bgb-RA | 7..1247 | 1..1241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bgb-RA | 22..1266 | 1..1245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bgb-RA | 1..1242 | 4..1245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bgb-RA | 7..1247 | 1..1241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Bgb-RA | 1..1242 | 4..1245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1639708..1640952 | 1..1245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1639708..1640952 | 1..1245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1639708..1640952 | 1..1245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 1639708..1640952 | 1..1245 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 1639708..1640952 | 1..1245 | 100 | Plus |
Translation from 2 to 928
> SD08175.hyp ASVGISKPQTNLFVVLCVVFFDGGEKFKQLAFRVLRYKSLLCIRRRLVEG ATKRNPSRVPSSRDYCVHAAVCRSTHRNIPYSAFHRADESRKPVKMMNEA ALANMIPYDTIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESE VRYTGYRERSIEERQVRFMNGCREGHTEASFVASGTNLQLVFNANQNPYL HDKECDFDKEHGKVHIKSYFIMNGVCVRFRGWIDLERLDGVGCLEYDERR AMHEDAILRDQIDRYNQRLREFEDTKRAYRDNRQDEMEAVRRGVASGGIG VGASMWRR*
Translation from 287 to 928
> SD08175.pep MMNEAALANMIPYDTIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRL SRESEVRYTGYRERSIEERQVRFMNGCREGHTEASFVASGTNLQLVFNAN QNPYLHDKECDFDKEHGKVHIKSYFIMNGVCVRFRGWIDLERLDGVGCLE YDERRAMHEDAILRDQIDRYNQRLREFEDTKRAYRDNRQDEMEAVRRGVA SGGIGVGASMWRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24819-PA | 213 | GF24819-PA | 1..213 | 1..213 | 1129 | 98.1 | Plus |
Dana\GF24821-PA | 214 | GF24821-PA | 7..188 | 1..184 | 699 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14808-PA | 213 | GG14808-PA | 1..213 | 1..213 | 1140 | 100 | Plus |
Dere\GG14810-PA | 213 | GG14810-PA | 11..213 | 5..211 | 690 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15954-PA | 214 | GH15954-PA | 1..214 | 1..213 | 1124 | 98.6 | Plus |
Dgri\GH15956-PA | 211 | GH15956-PA | 15..186 | 10..184 | 690 | 72.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Bgb-PA | 213 | CG7959-PA | 1..213 | 1..213 | 1132 | 100 | Plus |
Bgb-PB | 253 | CG7959-PB | 1..213 | 1..213 | 1132 | 100 | Plus |
Bro-PA | 213 | CG7960-PA | 11..202 | 5..198 | 684 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16606-PA | 214 | GI16606-PA | 1..214 | 1..213 | 1119 | 97.7 | Plus |
Dmoj\GI16609-PA | 206 | GI16609-PA | 8..179 | 10..184 | 696 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20806-PA | 213 | GL20806-PA | 1..213 | 1..213 | 1133 | 98.6 | Plus |
Dper\GL11917-PA | 213 | GL11917-PA | 9..201 | 3..197 | 682 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20722-PA | 213 | GA20722-PA | 1..213 | 1..213 | 1133 | 98.6 | Plus |
Dpse\GA23814-PA | 213 | GA23814-PA | 9..201 | 3..197 | 679 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14430-PA | 213 | GM14430-PA | 1..213 | 1..213 | 1140 | 100 | Plus |
Dsec\GM14432-PA | 213 | GM14432-PA | 11..213 | 5..211 | 693 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17621-PA | 213 | GD17621-PA | 1..213 | 1..213 | 1140 | 100 | Plus |
Dsim\GD13634-PA | 213 | GD13634-PA | 9..213 | 3..211 | 697 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12861-PA | 214 | GJ12861-PA | 1..214 | 1..213 | 1123 | 98.1 | Plus |
Dvir\GJ12863-PA | 226 | GJ12863-PA | 21..200 | 3..184 | 687 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24387-PA | 214 | GK24387-PA | 1..214 | 1..213 | 1115 | 97.2 | Plus |
Dwil\GK23643-PA | 214 | GK23643-PA | 1..214 | 1..213 | 1039 | 95.3 | Plus |
Dwil\GK24398-PA | 204 | GK24398-PA | 7..196 | 2..192 | 677 | 67.2 | Plus |