BDGP Sequence Production Resources |
Search the DGRC for SD08737
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 87 |
Well: | 37 |
Vector: | pOT2 |
Associated Gene/Transcript | Prx3-RA |
Protein status: | SD08737.pep: gold |
Preliminary Size: | 1093 |
Sequenced Size: | 1010 |
Gene | Date | Evidence |
---|---|---|
CG5826 | 2001-01-01 | Release 2 assignment |
CG5826 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5826 | 2003-03-19 | Blastp of sequenced clone |
Prx5037 | 2008-04-29 | Release 5.5 accounting |
Prx5037 | 2008-08-15 | Release 5.9 accounting |
Prx5037 | 2008-12-18 | 5.12 accounting |
1010 bp (1010 high quality bases) assembled on 2003-03-19
GenBank Submission: BT006003
> SD08737.complete TTTGTTTTCACTTTTTTTACGAAAAGTTCTGCCGGCTTCCCGTCAAATTC TGACTTAATATAAGCCTTATATAAACGTTATCTATTAGAACAAGATGTCT TTCGTAGCACGCTCACTGATTCGCAATGTGCCGCTGATGGGCAAGGCCAT CCTGAGTCAGCAGAAACAGATTGCCGCCCGCCTCCTGCATCAAACCGCTC CCCTTGCGGCAGTCCGCGTCCAGCAACCTGCTCCCGATTTCAAGGGTCTG GCTGTGGTGGACAACAGCTTCCAGGAGGTTAAGCTGGAAGACTACAGGGG CAAGTACCTGGTGCTCTTCTTCTACCCACTGGATTTCACATTCGTTTGCC CCACTGAAATTGTTGCATTTAGCGAGAGGATCAAGGAGTTCCATGACATT AACACCGAGGTTCTGGGCGTTTCCGTGGACTCCCACTTCAGCCATCTCAC CTGGTGCAATGTCGACCGCAAGAACGGCGGAGTGGGCCAGCTGAAGTACC CGCTCCTCTCCGATTTGACCAAGAAGATCTCTGCCGACTACGATGTGTTG CTGGACAAGGAGGGCATCTCGCTGCGCGGCACCTTCATCATTGACCCCAA TGGCATCCTGCGCCAGTACTCCATTAATGATTTGCCCGTGGGCCGATCCG TCGACGAGGTTCTGCGCCTGATCAAAGCCTTCCAGTTCGTCGAGCAGCAC GGAGAAGTCTGCCCGGCCAACTGGAATCCCAACTCGAATCCGGCTACCAT TAAGCCCGATGTGGAGGAGTCCAAGAAGTACTTCAGCAAGCACGGCTAGA GGATCATCTGATTATTTCTTAAACACCCTAAACATTCACTACACCAAAAG ACTCGCAAAATAAAGAGGATAAAGATTGGAATTTTCTGTATAACAATTTA AAAACAAAAACCCTAGGCATCGCACTAACTAATTATGCCTAATAAATCGA TCTTATTTTTGTATGTTAGACAGATGTGGGAATAAAAAAAAAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 13369554..13370200 | 983..337 | 3235 | 100 | Minus |
chr3R | 27901430 | chr3R | 13370256..13370397 | 336..195 | 710 | 100 | Minus |
chr3R | 27901430 | chr3R | 13370698..13370826 | 129..1 | 645 | 100 | Minus |
chr3R | 27901430 | chr3R | 13370527..13370593 | 194..128 | 335 | 100 | Minus |
chrX | 22417052 | chrX | 13222034..13222098 | 290..354 | 220 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 17545235..17545853 | 955..337 | 3080 | 99.8 | Minus |
3R | 32079331 | 3R | 17545910..17546051 | 336..195 | 695 | 99.3 | Minus |
3R | 32079331 | 3R | 17546354..17546482 | 129..1 | 630 | 99.2 | Minus |
3R | 32079331 | 3R | 17546183..17546249 | 194..128 | 335 | 100 | Minus |
X | 23542271 | X | 13331203..13331267 | 290..354 | 220 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 17286066..17286684 | 955..337 | 3080 | 99.8 | Minus |
3R | 31820162 | 3R | 17286741..17286882 | 336..195 | 695 | 99.2 | Minus |
3R | 31820162 | 3R | 17287185..17287313 | 129..1 | 630 | 99.2 | Minus |
3R | 31820162 | 3R | 17287014..17287080 | 194..128 | 335 | 100 | Minus |
X | 23527363 | X | 13339301..13339365 | 290..354 | 220 | 89.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 13369554..13370200 | 337..983 | 100 | <- | Minus |
chr3R | 13370256..13370397 | 195..336 | 100 | <- | Minus |
chr3R | 13370527..13370593 | 128..194 | 100 | <- | Minus |
chr3R | 13370700..13370826 | 1..127 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5037-RA | 1..705 | 95..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5037-RA | 1..705 | 95..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx3-RA | 1..705 | 95..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5037-RA | 1..705 | 95..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx3-RA | 1..705 | 95..799 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5037-RA | 28..989 | 1..962 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5037-RA | 28..989 | 1..962 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx3-RA | 50..1004 | 1..955 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx5037-RA | 28..989 | 1..962 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Prx3-RA | 50..1004 | 1..955 | 99 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17545235..17545853 | 337..955 | 99 | <- | Minus |
3R | 17545910..17546051 | 195..336 | 99 | <- | Minus |
3R | 17546183..17546249 | 128..194 | 100 | <- | Minus |
3R | 17546356..17546482 | 1..127 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17545235..17545853 | 337..955 | 99 | <- | Minus |
3R | 17545910..17546051 | 195..336 | 99 | <- | Minus |
3R | 17546183..17546249 | 128..194 | 100 | <- | Minus |
3R | 17546356..17546482 | 1..127 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17545235..17545853 | 337..955 | 99 | <- | Minus |
3R | 17545910..17546051 | 195..336 | 99 | <- | Minus |
3R | 17546183..17546249 | 128..194 | 100 | <- | Minus |
3R | 17546356..17546482 | 1..127 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 13370957..13371575 | 337..955 | 99 | <- | Minus |
arm_3R | 13371632..13371773 | 195..336 | 99 | <- | Minus |
arm_3R | 13371905..13371971 | 128..194 | 100 | <- | Minus |
arm_3R | 13372078..13372204 | 1..127 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17286066..17286684 | 337..955 | 99 | <- | Minus |
3R | 17286741..17286882 | 195..336 | 99 | <- | Minus |
3R | 17287014..17287080 | 128..194 | 100 | <- | Minus |
3R | 17287187..17287313 | 1..127 | 99 | Minus |
Translation from 94 to 798
> SD08737.pep MSFVARSLIRNVPLMGKAILSQQKQIAARLLHQTAPLAAVRVQQPAPDFK GLAVVDNSFQEVKLEDYRGKYLVLFFYPLDFTFVCPTEIVAFSERIKEFH DINTEVLGVSVDSHFSHLTWCNVDRKNGGVGQLKYPLLSDLTKKISADYD VLLDKEGISLRGTFIIDPNGILRQYSINDLPVGRSVDEVLRLIKAFQFVE QHGEVCPANWNPNSNPATIKPDVEESKKYFSKHG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15932-PA | 234 | GF15932-PA | 1..234 | 1..234 | 1173 | 93.2 | Plus |
Dana\GF24261-PA | 244 | GF24261-PA | 44..242 | 32..233 | 656 | 59.9 | Plus |
Dana\GF19402-PA | 194 | GF19402-PA | 3..191 | 41..231 | 612 | 57.1 | Plus |
Dana\GF23670-PA | 196 | GF23670-PA | 4..194 | 40..233 | 531 | 50 | Plus |
Dana\GF12795-PA | 220 | GF12795-PA | 1..200 | 40..232 | 255 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16768-PA | 234 | GG16768-PA | 1..234 | 1..234 | 1226 | 98.3 | Plus |
Dere\GG14898-PA | 242 | GG14898-PA | 43..241 | 32..233 | 657 | 60.4 | Plus |
Dere\GG17772-PA | 194 | GG17772-PA | 3..190 | 41..230 | 613 | 57.9 | Plus |
Dere\GG15885-PA | 196 | GG15885-PA | 4..192 | 40..230 | 535 | 50.3 | Plus |
Dere\GG24165-PA | 220 | GG24165-PA | 1..200 | 40..232 | 242 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17487-PA | 231 | GH17487-PA | 1..231 | 1..234 | 1075 | 85.1 | Plus |
Dgri\GH15986-PA | 243 | GH15986-PA | 44..242 | 32..233 | 633 | 58.4 | Plus |
Dgri\GH14416-PA | 195 | GH14416-PA | 4..194 | 42..234 | 510 | 46.4 | Plus |
Dgri\GH17696-PA | 288 | GH17696-PA | 178..268 | 41..131 | 336 | 62.6 | Plus |
Dgri\GH20103-PA | 220 | GH20103-PA | 1..195 | 40..229 | 228 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prx3-PA | 234 | CG5826-PA | 1..234 | 1..234 | 1215 | 100 | Plus |
Jafrac2-PC | 242 | CG1274-PC | 43..241 | 32..233 | 641 | 60.4 | Plus |
Jafrac2-PB | 242 | CG1274-PB | 43..241 | 32..233 | 641 | 60.4 | Plus |
Jafrac2-PA | 242 | CG1274-PA | 43..241 | 32..233 | 641 | 60.4 | Plus |
Jafrac1-PE | 194 | CG1633-PE | 3..190 | 41..230 | 594 | 57.9 | Plus |
Jafrac1-PD | 194 | CG1633-PD | 3..190 | 41..230 | 594 | 57.9 | Plus |
Jafrac1-PC | 194 | CG1633-PC | 3..190 | 41..230 | 594 | 57.9 | Plus |
Jafrac1-PA | 194 | CG1633-PA | 3..190 | 41..230 | 594 | 57.9 | Plus |
Jafrac1-PB | 194 | CG1633-PB | 3..190 | 41..230 | 594 | 57.9 | Plus |
CG6888-PA | 196 | CG6888-PA | 4..194 | 40..233 | 517 | 50.5 | Plus |
Prx2540-2-PA | 220 | CG11765-PA | 1..200 | 40..232 | 230 | 33 | Plus |
Prx2540-1-PA | 220 | CG12405-PA | 1..200 | 40..232 | 229 | 33 | Plus |
CG12896-PA | 220 | CG12896-PA | 1..200 | 40..232 | 227 | 32.5 | Plus |
Prx6005-PA | 222 | CG3083-PA | 34..179 | 71..210 | 188 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22813-PA | 233 | GI22813-PA | 1..233 | 1..234 | 1105 | 87.2 | Plus |
Dmoj\GI16636-PA | 243 | GI16636-PA | 44..242 | 32..233 | 649 | 59.9 | Plus |
Dmoj\GI16105-PA | 194 | GI16105-PA | 3..191 | 41..231 | 619 | 58.1 | Plus |
Dmoj\GI13545-PA | 268 | GI13545-PA | 43..264 | 5..230 | 508 | 44.2 | Plus |
Dmoj\GI20198-PA | 220 | GI20198-PA | 1..200 | 40..232 | 221 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13701-PA | 233 | GL13701-PA | 1..233 | 1..234 | 1149 | 91.5 | Plus |
Dper\GL26916-PA | 194 | GL26916-PA | 3..191 | 41..231 | 614 | 58.1 | Plus |
Dper\GL16320-PA | 204 | GL16320-PA | 15..203 | 44..233 | 605 | 59.2 | Plus |
Dper\GL20930-PA | 194 | GL20930-PA | 4..190 | 42..230 | 510 | 48.7 | Plus |
Dper\GL11593-PA | 220 | GL11593-PA | 1..200 | 40..232 | 227 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19159-PA | 233 | GA19159-PA | 1..233 | 1..234 | 1149 | 91.5 | Plus |
Dpse\GA11781-PA | 243 | GA11781-PA | 44..242 | 32..233 | 646 | 59.9 | Plus |
Dpse\GA14060-PA | 200 | GA14060-PA | 9..197 | 41..231 | 614 | 58.1 | Plus |
Dpse\GA28632-PA | 194 | GA28632-PA | 4..190 | 42..230 | 518 | 49.2 | Plus |
Dpse\GA11614-PA | 220 | GA11614-PA | 1..200 | 40..232 | 227 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16948-PA | 234 | GM16948-PA | 1..234 | 1..234 | 1234 | 99.1 | Plus |
Dsec\GM14524-PA | 242 | GM14524-PA | 43..241 | 32..233 | 653 | 60.4 | Plus |
Dsec\GM11621-PA | 194 | GM11621-PA | 3..190 | 41..230 | 611 | 57.9 | Plus |
Dsec\GM25516-PA | 196 | GM25516-PA | 4..195 | 40..234 | 533 | 50.3 | Plus |
Dsec\GM15357-PA | 765 | GM15357-PA | 1..68 | 1..68 | 346 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20225-PA | 234 | GD20225-PA | 1..234 | 1..234 | 1234 | 99.1 | Plus |
Dsim\GD13721-PA | 242 | GD13721-PA | 43..241 | 32..233 | 654 | 60.4 | Plus |
Dsim\GD17115-PA | 194 | GD17115-PA | 3..190 | 41..230 | 611 | 57.9 | Plus |
Dsim\GD14531-PA | 196 | GD14531-PA | 4..195 | 40..234 | 533 | 50.3 | Plus |
Dsim\GD25983-PA | 220 | GD25983-PA | 1..200 | 40..232 | 240 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22817-PA | 233 | GJ22817-PA | 1..233 | 1..234 | 1105 | 86.3 | Plus |
Dvir\GJ12891-PA | 244 | GJ12891-PA | 45..243 | 32..233 | 642 | 59.4 | Plus |
Dvir\GJ15754-PA | 194 | GJ15754-PA | 3..191 | 41..231 | 608 | 57.1 | Plus |
Dvir\GJ11904-PA | 195 | GJ11904-PA | 2..191 | 40..230 | 515 | 47.4 | Plus |
Dvir\GJ20147-PA | 220 | GJ20147-PA | 1..200 | 40..232 | 223 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12986-PA | 233 | GK12986-PA | 1..233 | 1..234 | 1110 | 87.2 | Plus |
Dwil\GK16580-PA | 248 | GK16580-PA | 49..247 | 32..233 | 656 | 60.4 | Plus |
Dwil\GK25196-PA | 213 | GK25196-PA | 1..210 | 20..231 | 638 | 54.7 | Plus |
Dwil\GK19651-PA | 196 | GK19651-PA | 1..192 | 37..230 | 534 | 47.4 | Plus |
Dwil\GK20591-PA | 196 | GK20591-PA | 1..192 | 37..230 | 533 | 47.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25263-PA | 234 | GE25263-PA | 1..234 | 1..234 | 1221 | 97.9 | Plus |
Dyak\GE20352-PA | 242 | GE20352-PA | 52..241 | 42..233 | 651 | 61.5 | Plus |
Dyak\Jafrac1-PA | 194 | GE17062-PA | 3..190 | 41..230 | 611 | 57.9 | Plus |
Dyak\GE22230-PA | 196 | GE22230-PA | 4..195 | 40..234 | 532 | 50.8 | Plus |
Dyak\GE19359-PA | 220 | GE19359-PA | 1..200 | 40..232 | 240 | 33.8 | Plus |
Translation from 94 to 798
> SD08737.hyp MSFVARSLIRNVPLMGKAILSQQKQIAARLLHQTAPLAAVRVQQPAPDFK GLAVVDNSFQEVKLEDYRGKYLVLFFYPLDFTFVCPTEIVAFSERIKEFH DINTEVLGVSVDSHFSHLTWCNVDRKNGGVGQLKYPLLSDLTKKISADYD VLLDKEGISLRGTFIIDPNGILRQYSINDLPVGRSVDEVLRLIKAFQFVE QHGEVCPANWNPNSNPATIKPDVEESKKYFSKHG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Prx3-PA | 234 | CG5826-PA | 1..234 | 1..234 | 1215 | 100 | Plus |
Jafrac2-PC | 242 | CG1274-PC | 43..241 | 32..233 | 641 | 60.4 | Plus |
Jafrac2-PB | 242 | CG1274-PB | 43..241 | 32..233 | 641 | 60.4 | Plus |
Jafrac2-PA | 242 | CG1274-PA | 43..241 | 32..233 | 641 | 60.4 | Plus |
Jafrac1-PE | 194 | CG1633-PE | 3..190 | 41..230 | 594 | 57.9 | Plus |