Clone SD08996 Report

Search the DGRC for SD08996

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:89
Well:96
Vector:pOT2
Associated Gene/Transcriptmtd-RG
Protein status:SD08996.pep: gold
Preliminary Size:4165
Sequenced Size:4799

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10199 2001-01-01 Release 2 assignment
CG32464 2002-05-30 Blastp of sequenced clone
l(3)82Fd 2008-04-29 Release 5.5 accounting
l(3)82Fd 2008-08-15 Release 5.9 accounting
l(3)82Fd 2008-12-18 5.12 accounting

Clone Sequence Records

SD08996.complete Sequence

4799 bp (4799 high quality bases) assembled on 2002-05-30

GenBank Submission: AY118658

> SD08996.complete
AGTTGGAAATGAAACTCGCGACGCGAGGCATTTGAAGCGAGATCTCGCGA
ATTCGCGGTTTTATCGGATCGCAGCCGAAATATCGAAAAAATCGTCATTT
TATGCAAATGCAAAGTGGCAGAGTGTTAAACTGGATTCTCAGTGGCTTCG
GCGAGAGTGTGTTGAGATGGAAACCCAAAGGGAAATTCATTCAGTTTCGA
ACTCATTGTTCATTGAGGAAAATTTATTCATTCGGATTGAGTTTTGCATT
CAATTTCGTTTCAATTAGATTCCCGCTTTGTTCGATGCTTTGTTTATTGG
CTGTTCGTTATATTTTTTTTTGTTTTTGATAAGACGGTTCTTATCTTAAT
TTACGTAAAGCAAGTTTCAATTTAAATGAAAGATAACAGCTCTCAGCCGC
GATGTTGCCGCGTCAGTTTGTGTAAATATTTTGAGTTTTTGGCCAAACTG
GTTTATTGAAATTTCTGTATTCTGAATTCAGAATCGCTCGTGTATTTTAC
AAAAGTGAAGCCACCTTCCCCTTTTCTCCAACTCATCTGTCAAATGGCGC
GGCTATGATTGATCGACCAGCTAATCGTCCACAGAAATTGCATTTAGTTT
CGGGCTCGTTTCGGTTTCTACTTCAGTGTAAGCAATGTAATGAACTCAGT
GCGAAAACCCAAAAACATTTGAACTCACAATGCAGAACGTTATACTTACA
TCGCAATACTATTGGTCACGTAGGGCTAGTCAAGATGTTTCCAGTTTGTC
ACGCAGCGTTGACAATTTGGCGATACCCGTGCGCAGGAGCAAATCGCGCA
GCGTGGATCACGGCCTTGCGGCTCCATTCGACTTGGACTCACTCCGCTCC
AAAGTGGAGCAGCGCTTCGAGAGCGTCGACAAATTATCAAGGCAAAAGTC
TTCATTGCCCACCATACCCACCATTTCCTACACCGTGGGCAATCGCGACA
CCCTGACCTCCGTGGCCGCCCGGTTCGACACCACGCCCTCGGAGCTGACC
CACCTCAACCGGCTGAACAGCTCCTTCATCTATCCGGGCCAGCAGCTGCT
GGTGCCGGACAAGAGCGCCAAGGACGACGCCTCCAGCAGCTCCACCCACG
ACGCGGACGGTGCCAGCCTGTCCGGCAAATCGAGTCCGGTCGAGCGCAAG
TTGTCCGGCGACGAGAGCCGCGAGAAAGACATACTCGAGGGCCTGCGCCC
CGGATCCCCAAAACCGGGACACATCGAGCGCGTGGGCGGCAGTAGCCAGC
AGCAGCAGGCGGAGGAGGAGGCCAACAAAAGCGACGATCCGGTGATCACA
CAGCGCTTCCTCAAGATCAATGTGCGCCACATCACGGACGGACAGGGCGT
GGTGGGCGGCGTCCTGCTGGTCACGCCCAACGCCGTTATGTTCGATCCCA
ACGTCAGCGATCCCCTGGTCATCGAGCACGGCCCGGAGAGCTACGGCGTC
ATTGCGCCCATGGAGCTGGTGGTCAACGCCGCCATCTTCCACGACATTGC
GCACATGCGAGTGGCCGGAGGAGCAGGTCAGGGCCTGAACTCCGCCTCGG
GAGACGCGGAGAAACCGGAAATCTACTATCCCAAACCAGTATTAGTCGAA
GAAGACTCCAAGGAGCTACCCGAGCAGCAGTCGCTGCTGGGCGAAGACGG
TAATAAGCGCTTAGATGCAGAAATAGGGTCGCTGGAAATCGCTGACGACC
AAGAGTCGCTTTGCTCCAGCACTGGACGCGATGGCGACGCGTTTCCCAAA
GCCTTCGACCGCGAACGTGTGGAGGACTCTTCTATGGAAGCCAAAGATAG
CGCTAAGACTGACGCTCTAGACGATGAAGACAAGAAGGCCGGCCTGGGCC
TCTCCAGCACTCGCTCCACCCTCGAGGAGCGGCGCAAGAGTTTGTTGGAT
CACCACTGGGCCATTCCGAGCAAAGACCGCTATTGTTTGTCTAATTCCCG
AAGATCCTCGGAAGATGAGGGCGACAACGAGTCAAACGTTACCGTAGACA
GTGGCGCACGAGTCCAGGATCCGCACTCGGCCAATAGTTCGGTCAGCGGC
GTGCCGCTTAGCCAGCCCCCTGTGGCTGCTGCTGCAGCTGCCGCTGCCGT
CGCACCCGCCTCCGCCGTCGTTCCTCTGCCTCCCTCGGGCATTGATCTGG
AGCACTTGGAGCAGCTGTCCAAGCAGTCGTGCTACGACTCGGGCATCGAT
ATCCGCGAGCCCGTTCCCAACGTACAGCCGATACCAAAAAAAACCGTCTA
CAGCGACGCGGACATTGTCCTCAGCTCCGACTGGGTACCACCGAAAACCA
TTGTGCCGACGCACTTCAGCGAGTCCCCGCCGCGCAGCACCATCCTCGGC
CAGAGTCTCGACGCCGGCACAGGAGGCGCAGGGGGCGTCCGTAAGAAGAC
CTCAAGCGTGAGCTTCAGCGTCGACGACGAGGCCGCCCAGCAGGCTCAGG
CCCAGTCGGCTGCACTGGCTGTCACAGACAAGCAGGCCGACAAGAAGAAC
AAGATGCTTAAACGTCTCTCATACCCCCTGACCTGGGTGGAGGGCTTGAC
TGGGGAGGGTGGTGCCGTGCCGCCCGGCGGCGTGGGCAGTGGAAGCCTGA
ACAAGTCGGGAGACACAGACTCGGCGCCCAACACGGGTGACTCCAACCAA
AGTGTATTTTCGAAAGTATTCTCAAGACGTTCCTCAATCGGTACCTTTAT
TCGTCCTCACTCCTCGGAGGGCACTTCGTCCAGCACCAAGCTGAAGGAGG
CCAAGCAGGCGCCCAAGTTGGACTACCGCTCCATGGTCTCCATGGACGAC
AAGCCGGAACTCTTTATCAGTGTGGACAAACTCATCCCACGACCGGCTCG
AGCCTGCCTTGACCCACCATTGTATCTACGCCTGCGCATGGGCAAGCCCA
TCGGCAAGGCCATTCCGCTGCCAACCTCTGTCATGTCCTACGGGAAGAAC
AAGTTGCGCGCTGAGTACTGGTTCAGTGTGCCAAAGAATCGCGTTGATGA
GCTCTATCGCTTCATAAACACCTGGGTGAAACACCTGTACGGTGAGCTGG
ACGAAGAGCAGATCAAGGCGCGTGGCTTCGAGCTGATTCAAGAGGACACC
GAGTGGACCAAGAGCGGCACGACCAAAGCCGGCATGGGAGGCGGTAGCCA
GGATGGCGAGGAGATTAGCGACCTGACCCGCGAGTCCTGGGAGGTGCTGT
CAATGAGCACAGATGAATATCGCAAGACCTCGCTCTTTGCCACCGGTTCC
TTCGACCTGGACTTCCCCATACCAGACCTGATCGGCAAGACAGAAATCCT
TACAGAGGAGCATCGCGAGAAGCTCTGTTCACATCTGCCGGCTAGAGCCG
AGGGATACTCCTGGTCCCTGATCTTCAGCACCTCACAACATGGTTTCGCA
CTGAACTCCCTGTACCGCAAAATGGCGCGTCTGGAGAGTCCAGTTCTGAT
TGTCATTGAGGATACGGAGCACAACGTATTTGGTGCCCTCACCTCCTGCT
CACTGCATGTGTCGGATCACTTTTACGGCACCGGTGAGTCCCTGCTCTAC
AAGTTTAACCCCAGCTTCAAGGTGTTCCATTGGACTGGCGAGAATATGTA
CTTCATCAAAGGAAACATGGAGAGCCTTTCGATTGGCGCTGGAGACGGTC
GTTTTGGCCTGTGGCTGGATGGTGATCTGAACCAGGGACGATCGCAACAG
TGCAGCACATACGGCAATGAGCCTCTGGCGCCACAAGAAGACTTTGTTAT
CAAAACACTCGAATGCTGGGCATTTGTTTAAGTGAATTTCTGTTGTCGAC
AACAAACATATTTAAGGATGGGAGCGAGGGCCTCCTGCCGACCTATCTAT
TTAATTAACTATATGTACTTGTACTAAAAACCAACAACCTGAGAAAGATG
TCAAAAGCTGGTGTGCGTCCAAGGATCATCCCTTCGGAACGGTCCACACA
GCCCGAACCCCGAAACACTTGAATACACGAACACCACCACATGAAGATGG
TTTTGAAGGGATCTGATCTGAAGAAAAATGCTTGTGAAAACTCCGTTCTC
GGAAGCAACTGCGAGTTAGCTATGCGTTGGAACGTATTAATTATTTAGTT
TTTATATCATATATTATTAAACAAGAGCAACTAAATTATGTGTTAGACTT
AAACAAAACAAAACAGAATATGAGAAAACCCAAGAAACAGACTAGCGACA
CAAAAACTTAAGCGAAAAGAAATGAGGATAACATTTGAGGGCATCACACA
TCTCCATGAAAAACATGGCACACGCATACACCCACATACGCCTACATTAA
AAAACACACATTATGTTTAGTTCTTAATACCGAAAATTATAAACACCAAA
TTGTGAGAAGAGACATATTGAAAATAGGCAGATTTTTATCATTTATCGTG
TCCAGTTCTCTGGATTGATTTCAGTTTGAATTTAGTTTCGATTGTTTGAG
TTACTAGAGTTATTTGAGAACATTGTGAAAAGCGAAGCGAGCTGAGATGA
GAAAAATAAAAAGAATGTCGATATAATTTATAGTGCAAAAGTGCTGATTG
CAAGTAAAACTAAAGCGAAGATAACTTTAAACGATTTGACTTTTATGTAT
ATGTAAAGAAGGAGCCGCGAAGAGCTGAGAGCGAGCGTTTTATTTTTAGT
TTTACACGATATACATACATACATATATTTAATTACGATTATTTTAATGC
TAATGATGTTGACTTTTATGCAATTATACTAAAACAAAAACAGAAACAAC
ACCAGAATGAAATACACAATATTATACAACCAAAAAAAAAAAAAAAAAA

SD08996.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:56:56
Subject Length Description Subject Range Query Range Score Percent Strand
l(3)82Fd-RG 4923 l(3)82Fd-RG 134..4917 1..4785 23765 99.8 Plus
l(3)82Fd.g 7671 l(3)82Fd.g 134..4917 1..4785 23765 99.8 Plus
l(3)82Fd.z 5153 l(3)82Fd.z 1..1928 1..1929 9515 99.7 Plus
l(3)82Fd.z 5153 l(3)82Fd.z 3256..4850 3191..4785 7945 99.8 Plus
l(3)82Fd.z 5153 l(3)82Fd.z 1928..3168 1953..3193 6205 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 1098611..1099746 4781..3646 5650 99.8 Minus
chr3R 27901430 chr3R 1119971..1120545 2503..1929 2875 100 Minus
chr3R 27901430 chr3R 1121812..1122302 1667..1177 2455 100 Minus
chr3R 27901430 chr3R 1133097..1133443 510..165 1685 99.7 Minus
chr3R 27901430 chr3R 1123867..1124154 1178..891 1440 100 Minus
chr3R 27901430 chr3R 1118302..1118507 3196..2991 1030 100 Minus
chr3R 27901430 chr3R 1119727..1119901 2676..2502 875 100 Minus
chr3R 27901430 chr3R 1099813..1099982 3645..3476 850 100 Minus
chr3R 27901430 chr3R 1133598..1133763 166..1 830 100 Minus
chr3R 27901430 chr3R 1100396..1100559 3478..3315 820 100 Minus
chr3R 27901430 chr3R 1118663..1118825 2991..2829 815 100 Minus
chr3R 27901430 chr3R 1121306..1121462 1929..1773 785 100 Minus
chr3R 27901430 chr3R 1118884..1119037 2828..2675 770 100 Minus
chr3R 27901430 chr3R 1131373..1131512 716..577 700 100 Minus
chr3R 27901430 chr3R 1100630..1100753 3315..3192 620 100 Minus
chr3R 27901430 chr3R 1121521..1121629 1775..1667 545 100 Minus
chr3R 27901430 chr3R 1125133..1125240 891..784 525 99.1 Minus
chr3R 27901430 chr3R 1129774..1129847 787..714 370 100 Minus
chr3R 27901430 chr3R 1131568..1131636 577..509 345 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:52:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5272943..5274082 4785..3646 5670 99.8 Minus
3R 32079331 3R 5294306..5294880 2503..1929 2875 100 Minus
3R 32079331 3R 5296147..5296637 1667..1177 2455 100 Minus
3R 32079331 3R 5307433..5307779 510..165 1685 99.7 Minus
3R 32079331 3R 5298202..5298489 1178..891 1440 100 Minus
3R 32079331 3R 5292637..5292842 3196..2991 1030 100 Minus
3R 32079331 3R 5294062..5294236 2676..2502 875 100 Minus
3R 32079331 3R 5274149..5274318 3645..3476 850 100 Minus
3R 32079331 3R 5307934..5308099 166..1 830 100 Minus
3R 32079331 3R 5274732..5274895 3478..3315 820 100 Minus
3R 32079331 3R 5292998..5293160 2991..2829 815 100 Minus
3R 32079331 3R 5295641..5295797 1929..1773 785 100 Minus
3R 32079331 3R 5293219..5293372 2828..2675 770 100 Minus
3R 32079331 3R 5305709..5305848 716..577 700 100 Minus
3R 32079331 3R 5274966..5275089 3315..3192 620 100 Minus
3R 32079331 3R 5295856..5295964 1775..1667 545 100 Minus
3R 32079331 3R 5299469..5299576 891..784 525 99.1 Minus
3R 32079331 3R 5304110..5304183 787..714 370 100 Minus
3R 32079331 3R 5305904..5305972 577..509 345 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:29:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 5013774..5014913 4785..3646 5670 99.8 Minus
3R 31820162 3R 5035137..5035711 2503..1929 2875 100 Minus
3R 31820162 3R 5036978..5037468 1667..1177 2455 100 Minus
3R 31820162 3R 5048264..5048610 510..165 1695 99.7 Minus
3R 31820162 3R 5039033..5039320 1178..891 1440 100 Minus
3R 31820162 3R 5033468..5033673 3196..2991 1030 100 Minus
3R 31820162 3R 5034893..5035067 2676..2502 875 100 Minus
3R 31820162 3R 5014980..5015149 3645..3476 850 100 Minus
3R 31820162 3R 5048765..5048930 166..1 830 100 Minus
3R 31820162 3R 5015563..5015726 3478..3315 820 100 Minus
3R 31820162 3R 5033829..5033991 2991..2829 815 100 Minus
3R 31820162 3R 5036472..5036628 1929..1773 785 100 Minus
3R 31820162 3R 5034050..5034203 2828..2675 770 100 Minus
3R 31820162 3R 5046540..5046679 716..577 700 100 Minus
3R 31820162 3R 5015797..5015920 3315..3192 620 100 Minus
3R 31820162 3R 5036687..5036795 1775..1667 545 100 Minus
3R 31820162 3R 5040300..5040407 891..784 525 99 Minus
3R 31820162 3R 5044941..5045014 787..714 370 100 Minus
3R 31820162 3R 5046735..5046803 577..509 345 100 Minus
Blast to na_te.dros performed 2019-03-16 08:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 1769..1871 381..279 136 65.4 Minus
412 7567 412 412 7567bp 6861..6999 4638..4778 123 57 Plus
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 6340..6475 4081..4217 123 58.3 Plus

SD08996.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:09:46 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 1121522..1121628 1668..1774 100 <- Minus
chr3R 1098611..1099746 3646..4781 99 <- Minus
chr3R 1099813..1099982 3476..3645 100 <- Minus
chr3R 1100399..1100558 3316..3475 100 <- Minus
chr3R 1100630..1100751 3194..3315 100 <- Minus
chr3R 1118305..1118506 2992..3193 100 <- Minus
chr3R 1118663..1118825 2829..2991 100 <- Minus
chr3R 1118884..1119035 2677..2828 100 <- Minus
chr3R 1119727..1119899 2504..2676 100 <- Minus
chr3R 1119971..1120544 1930..2503 100 <- Minus
chr3R 1121306..1121460 1775..1929 100 <- Minus
chr3R 1121812..1122300 1179..1667 100 <- Minus
chr3R 1123867..1124154 891..1178 100 <- Minus
chr3R 1125134..1125237 787..890 99 <- Minus
chr3R 1129775..1129846 715..786 100 <- Minus
chr3R 1131375..1131511 578..714 100 <- Minus
chr3R 1131568..1131634 510..577 98 <- Minus
chr3R 1133098..1133441 166..509 99 <- Minus
chr3R 1133599..1133763 1..165 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:35:56 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
l(3)82Fd-RG 1..3102 680..3781 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:35:42 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
l(3)82Fd-RG 1..3102 680..3781 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:50:37 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
mtd-RG 1..3102 680..3781 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:27:17 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
l(3)82Fd-RG 1..3102 680..3781 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:35:54 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
mtd-RG 1..3102 680..3781 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:35:55 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
l(3)82Fd-RG 1..4780 1..4781 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:35:41 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
l(3)82Fd-RG 1..4780 1..4781 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:50:37 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
mtd-RG 1..4780 1..4781 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:27:18 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
l(3)82Fd-RG 1..4780 1..4781 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:35:54 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
mtd-RG 1..4780 1..4781 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:46 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5307935..5308099 1..165 100   Minus
3R 5272947..5274082 3646..4781 99 <- Minus
3R 5274149..5274318 3476..3645 100 <- Minus
3R 5274735..5274894 3316..3475 100 <- Minus
3R 5274966..5275087 3194..3315 100 <- Minus
3R 5292640..5292841 2992..3193 100 <- Minus
3R 5292998..5293160 2829..2991 100 <- Minus
3R 5293219..5293370 2677..2828 100 <- Minus
3R 5294062..5294234 2504..2676 100 <- Minus
3R 5294306..5294879 1930..2503 100 <- Minus
3R 5295641..5295795 1775..1929 100 <- Minus
3R 5295857..5295963 1668..1774 100 <- Minus
3R 5296147..5296635 1179..1667 100 <- Minus
3R 5298202..5298489 891..1178 100 <- Minus
3R 5299470..5299573 787..890 99 <- Minus
3R 5304111..5304182 715..786 100 <- Minus
3R 5305711..5305847 578..714 100 <- Minus
3R 5305904..5305970 510..577 98 <- Minus
3R 5307434..5307777 166..509 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:46 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5307935..5308099 1..165 100   Minus
3R 5272947..5274082 3646..4781 99 <- Minus
3R 5274149..5274318 3476..3645 100 <- Minus
3R 5274735..5274894 3316..3475 100 <- Minus
3R 5274966..5275087 3194..3315 100 <- Minus
3R 5292640..5292841 2992..3193 100 <- Minus
3R 5292998..5293160 2829..2991 100 <- Minus
3R 5293219..5293370 2677..2828 100 <- Minus
3R 5294062..5294234 2504..2676 100 <- Minus
3R 5294306..5294879 1930..2503 100 <- Minus
3R 5295641..5295795 1775..1929 100 <- Minus
3R 5295857..5295963 1668..1774 100 <- Minus
3R 5296147..5296635 1179..1667 100 <- Minus
3R 5298202..5298489 891..1178 100 <- Minus
3R 5299470..5299573 787..890 99 <- Minus
3R 5304111..5304182 715..786 100 <- Minus
3R 5305711..5305847 578..714 100 <- Minus
3R 5305904..5305970 510..577 98 <- Minus
3R 5307434..5307777 166..509 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:46 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5307935..5308099 1..165 100   Minus
3R 5272947..5274082 3646..4781 99 <- Minus
3R 5274149..5274318 3476..3645 100 <- Minus
3R 5274735..5274894 3316..3475 100 <- Minus
3R 5274966..5275087 3194..3315 100 <- Minus
3R 5292640..5292841 2992..3193 100 <- Minus
3R 5292998..5293160 2829..2991 100 <- Minus
3R 5293219..5293370 2677..2828 100 <- Minus
3R 5294062..5294234 2504..2676 100 <- Minus
3R 5294306..5294879 1930..2503 100 <- Minus
3R 5295641..5295795 1775..1929 100 <- Minus
3R 5295857..5295963 1668..1774 100 <- Minus
3R 5296147..5296635 1179..1667 100 <- Minus
3R 5298202..5298489 891..1178 100 <- Minus
3R 5299470..5299573 787..890 99 <- Minus
3R 5304111..5304182 715..786 100 <- Minus
3R 5305711..5305847 578..714 100 <- Minus
3R 5305904..5305970 510..577 98 <- Minus
3R 5307434..5307777 166..509 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:50:37 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1118362..1118563 2992..3193 100 <- Minus
arm_3R 1118720..1118882 2829..2991 100 <- Minus
arm_3R 1118941..1119092 2677..2828 100 <- Minus
arm_3R 1119784..1119956 2504..2676 100 <- Minus
arm_3R 1133657..1133821 1..165 100   Minus
arm_3R 1098669..1099804 3646..4781 99 <- Minus
arm_3R 1099871..1100040 3476..3645 100 <- Minus
arm_3R 1100457..1100616 3316..3475 100 <- Minus
arm_3R 1100688..1100809 3194..3315 100 <- Minus
arm_3R 1121579..1121685 1668..1774 100 <- Minus
arm_3R 1120028..1120601 1930..2503 100 <- Minus
arm_3R 1121363..1121517 1775..1929 100 <- Minus
arm_3R 1121869..1122357 1179..1667 100 <- Minus
arm_3R 1123924..1124211 891..1178 100 <- Minus
arm_3R 1125192..1125295 787..890 99 <- Minus
arm_3R 1129833..1129904 715..786 100 <- Minus
arm_3R 1131433..1131569 578..714 100 <- Minus
arm_3R 1131626..1131692 510..577 98 <- Minus
arm_3R 1133156..1133499 166..509 99 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:59:46 Download gff for SD08996.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5015566..5015725 3316..3475 100 <- Minus
3R 5015797..5015918 3194..3315 100 <- Minus
3R 5033471..5033672 2992..3193 100 <- Minus
3R 5033829..5033991 2829..2991 100 <- Minus
3R 5034050..5034201 2677..2828 100 <- Minus
3R 5034893..5035065 2504..2676 100 <- Minus
3R 5048766..5048930 1..165 100   Minus
3R 5013778..5014913 3646..4781 99 <- Minus
3R 5014980..5015149 3476..3645 100 <- Minus
3R 5035137..5035710 1930..2503 100 <- Minus
3R 5036472..5036626 1775..1929 100 <- Minus
3R 5036688..5036794 1668..1774 100 <- Minus
3R 5036978..5037466 1179..1667 100 <- Minus
3R 5039033..5039320 891..1178 100 <- Minus
3R 5040301..5040404 787..890 99 <- Minus
3R 5044942..5045013 715..786 100 <- Minus
3R 5046542..5046678 578..714 100 <- Minus
3R 5046735..5046801 510..577 98 <- Minus
3R 5048265..5048608 166..509 99 <- Minus

SD08996.pep Sequence

Translation from 679 to 3780

> SD08996.pep
MQNVILTSQYYWSRRASQDVSSLSRSVDNLAIPVRRSKSRSVDHGLAAPF
DLDSLRSKVEQRFESVDKLSRQKSSLPTIPTISYTVGNRDTLTSVAARFD
TTPSELTHLNRLNSSFIYPGQQLLVPDKSAKDDASSSSTHDADGASLSGK
SSPVERKLSGDESREKDILEGLRPGSPKPGHIERVGGSSQQQQAEEEANK
SDDPVITQRFLKINVRHITDGQGVVGGVLLVTPNAVMFDPNVSDPLVIEH
GPESYGVIAPMELVVNAAIFHDIAHMRVAGGAGQGLNSASGDAEKPEIYY
PKPVLVEEDSKELPEQQSLLGEDGNKRLDAEIGSLEIADDQESLCSSTGR
DGDAFPKAFDRERVEDSSMEAKDSAKTDALDDEDKKAGLGLSSTRSTLEE
RRKSLLDHHWAIPSKDRYCLSNSRRSSEDEGDNESNVTVDSGARVQDPHS
ANSSVSGVPLSQPPVAAAAAAAAVAPASAVVPLPPSGIDLEHLEQLSKQS
CYDSGIDIREPVPNVQPIPKKTVYSDADIVLSSDWVPPKTIVPTHFSESP
PRSTILGQSLDAGTGGAGGVRKKTSSVSFSVDDEAAQQAQAQSAALAVTD
KQADKKNKMLKRLSYPLTWVEGLTGEGGAVPPGGVGSGSLNKSGDTDSAP
NTGDSNQSVFSKVFSRRSSIGTFIRPHSSEGTSSSTKLKEAKQAPKLDYR
SMVSMDDKPELFISVDKLIPRPARACLDPPLYLRLRMGKPIGKAIPLPTS
VMSYGKNKLRAEYWFSVPKNRVDELYRFINTWVKHLYGELDEEQIKARGF
ELIQEDTEWTKSGTTKAGMGGGSQDGEEISDLTRESWEVLSMSTDEYRKT
SLFATGSFDLDFPIPDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIFS
TSQHGFALNSLYRKMARLESPVLIVIEDTEHNVFGALTSCSLHVSDHFYG
TGESLLYKFNPSFKVFHWTGENMYFIKGNMESLSIGAGDGRFGLWLDGDL
NQGRSQQCSTYGNEPLAPQEDFVIKTLECWAFV*

SD08996.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 03:21:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16062-PA 1145 GF16062-PA 254..1115 13..840 3634 85.8 Plus
Dana\GF16064-PA 267 GF16064-PA 53..267 823..1033 1072 92.6 Plus
Dana\GF24274-PA 592 GF24274-PA 423..590 882..1033 221 30.6 Plus
Dana\GF14028-PA 450 GF14028-PA 234..398 873..1031 172 29.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 03:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11075-PA 1118 GG11075-PA 258..1083 13..840 4205 97.2 Plus
Dere\GG11111-PA 192 GG11111-PA 1..192 842..1033 1063 100 Plus
Dere\GG21540-PA 592 GG21540-PA 423..590 882..1033 221 30.6 Plus
Dere\GG23536-PA 447 GG23536-PA 234..398 873..1031 173 29.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 03:21:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22687-PA 1108 GH22687-PA 244..1077 13..840 3400 82.9 Plus
Dgri\GH22698-PA 266 GH22698-PA 53..266 823..1033 1019 88.4 Plus
Dgri\GH11143-PA 621 GH11143-PA 452..619 882..1033 220 30.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:37
Subject Length Description Subject Range Query Range Score Percent Strand
mtd-PG 1033 CG32464-PG 1..1033 1..1033 5325 100 Plus
mtd-PO 1025 CG32464-PO 1..1025 1..1033 5262 99.2 Plus
mtd-PK 1055 CG32464-PK 1..1055 1..1033 5221 96.4 Plus
mtd-PJ 1270 CG32464-PJ 258..1270 13..1033 5195 99.2 Plus
mtd-PB 1270 CG32464-PB 258..1270 13..1033 5195 99.2 Plus
mtd-PN 1270 CG32464-PN 258..1270 13..1033 5195 99.2 Plus
mtd-PP 1314 CG32464-PP 258..1314 13..1033 5134 95 Plus
mtd-PV 1344 CG32464-PV 258..1344 13..1033 5093 92.4 Plus
mtd-PU 1246 CG32464-PU 257..1246 36..1033 5089 99.2 Plus
mtd-PT 1106 CG32464-PT 117..1106 36..1033 5085 99.1 Plus
mtd-PS 1106 CG32464-PS 117..1106 36..1033 5085 99.1 Plus
mtd-PX 1127 CG32464-PX 56..1127 36..1033 5046 92.9 Plus
mtd-PW 1180 CG32464-PW 117..1180 36..1033 4983 92.2 Plus
mtd-PM 1012 CG32464-PM 47..1012 60..1033 4919 98.3 Plus
mtd-PY 1158 CG32464-PY 248..1158 123..1033 4508 96.2 Plus
mtd-PAA 871 CG32464-PAA 8..871 164..1033 4455 99.1 Plus
mtd-PF 869 CG32464-PF 8..869 164..1033 4441 98.9 Plus
mtd-PR 789 CG32464-PR 1..789 237..1033 4080 99 Plus
mtd-PC 267 CG32464-PC 53..267 823..1033 1050 93 Plus
mtd-PA 210 CG32464-PA 15..210 838..1033 1048 100 Plus
mtd-PI 213 CG32464-PI 19..213 839..1033 1043 100 Plus
mtd-PQ 192 CG32464-PQ 1..192 842..1033 1031 100 Plus
mtd-PH 192 CG32464-PH 1..192 842..1033 1031 100 Plus
sky-PK 597 CG9339-PK 410..595 862..1033 226 30 Plus
sky-PL 606 CG9339-PL 419..604 862..1033 226 30 Plus
sky-PJ 607 CG9339-PJ 420..605 862..1033 226 30 Plus
sky-PG 568 CG9339-PG 399..566 882..1033 219 30.6 Plus
sky-PD 568 CG9339-PD 399..566 882..1033 219 30.6 Plus
sky-PE 568 CG9339-PE 399..566 882..1033 219 30.6 Plus
sky-PI 573 CG9339-PI 404..571 882..1033 219 30.6 Plus
sky-PF 573 CG9339-PF 404..571 882..1033 219 30.6 Plus
sky-PA 587 CG9339-PA 418..585 882..1033 219 30.6 Plus
sky-PH 587 CG9339-PH 418..585 882..1033 219 30.6 Plus
sky-PB 587 CG9339-PB 418..585 882..1033 219 30.6 Plus
sky-PC 592 CG9339-PC 423..590 882..1033 219 30.6 Plus
mtd-PY 1158 CG32464-PY 257..291 36..70 171 100 Plus
CG5149-PA 448 CG5149-PA 249..398 889..1031 168 29.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 03:21:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10211-PA 874 GI10211-PA 1..833 1..840 3425 82.7 Plus
Dmoj\GI10212-PA 267 GI10212-PA 53..267 823..1033 1054 90.7 Plus
Dmoj\GI17849-PA 621 GI17849-PA 452..619 882..1033 220 30.6 Plus
Dmoj\GI17790-PA 449 GI17790-PA 234..398 873..1031 194 31.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 03:21:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22191-PA 917 GL22191-PA 1..885 1..840 3545 82 Plus
Dper\GL22193-PA 210 GL22193-PA 15..210 838..1033 1063 98.5 Plus
Dper\GL10263-PA 72 GL10263-PA 1..72 752..826 260 64 Plus
Dper\GL19586-PA 621 GL19586-PA 452..619 882..1033 220 30.6 Plus
Dper\GL10262-PA 57 GL10262-PA 4..50 670..716 172 74.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 03:21:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27405-PA 951 GA27405-PA 1..841 1..840 3635 86.7 Plus
Dpse\GA27407-PA 210 GA27407-PA 15..210 838..1033 1063 98.5 Plus
Dpse\GA26020-PA 621 GA26020-PA 452..619 882..1033 220 30.6 Plus
Dpse\GA18692-PA 450 GA18692-PA 253..398 893..1031 180 30.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 03:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10647-PA 1146 GM10647-PA 259..1086 13..840 4292 98.7 Plus
Dsec\GM10650-PA 192 GM10650-PA 1..192 842..1033 1063 100 Plus
Dsec\GM23295-PA 592 GM23295-PA 423..590 882..1033 221 30.6 Plus
Dsec\GM23297-PA 178 GM23297-PA 4..176 862..1033 201 28.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 03:21:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19631-PA 913 GD19631-PA 58..863 71..840 3874 92.5 Plus
Dsim\GD19632-PA 267 GD19632-PA 53..267 823..1033 1077 93 Plus
Dsim\GD21669-PA 350 GD21669-PA 181..348 882..1033 223 30.6 Plus
Dsim\GD22498-PA 448 GD22498-PA 234..398 873..1031 171 28.7 Plus
Dsim\GD19630-PA 232 GD19630-PA 195..228 37..70 169 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 03:21:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11013-PA 1142 GJ11013-PA 259..1091 13..840 3345 82.7 Plus
Dvir\GJ11014-PA 267 GJ11014-PA 53..267 823..1033 1071 92.1 Plus
Dvir\GJ17344-PA 621 GJ17344-PA 452..619 882..1033 221 30.6 Plus
Dvir\GJ17615-PA 448 GJ17615-PA 234..398 873..1031 184 31.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 03:21:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14284-PA 891 GK14284-PA 1..827 1..840 3403 83.4 Plus
Dwil\GK14285-PA 268 GK14285-PA 54..268 823..1033 1060 91.2 Plus
Dwil\GK14678-PA 592 GK14678-PA 423..590 882..1033 220 30.6 Plus
Dwil\GK24727-PA 450 GK24727-PA 235..399 873..1031 165 28.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 03:21:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25295-PA 1119 GE25295-PA 256..1069 13..840 3851 94.2 Plus
Dyak\GE25299-PA 192 GE25299-PA 1..192 842..1033 1063 100 Plus
Dyak\GE13017-PA 592 GE13017-PA 423..590 882..1033 221 30.6 Plus
Dyak\GE18362-PA 448 GE18362-PA 234..398 873..1031 173 29.3 Plus

SD08996.hyp Sequence

Translation from 679 to 3780

> SD08996.hyp
MQNVILTSQYYWSRRASQDVSSLSRSVDNLAIPVRRSKSRSVDHGLAAPF
DLDSLRSKVEQRFESVDKLSRQKSSLPTIPTISYTVGNRDTLTSVAARFD
TTPSELTHLNRLNSSFIYPGQQLLVPDKSAKDDASSSSTHDADGASLSGK
SSPVERKLSGDESREKDILEGLRPGSPKPGHIERVGGSSQQQQAEEEANK
SDDPVITQRFLKINVRHITDGQGVVGGVLLVTPNAVMFDPNVSDPLVIEH
GPESYGVIAPMELVVNAAIFHDIAHMRVAGGAGQGLNSASGDAEKPEIYY
PKPVLVEEDSKELPEQQSLLGEDGNKRLDAEIGSLEIADDQESLCSSTGR
DGDAFPKAFDRERVEDSSMEAKDSAKTDALDDEDKKAGLGLSSTRSTLEE
RRKSLLDHHWAIPSKDRYCLSNSRRSSEDEGDNESNVTVDSGARVQDPHS
ANSSVSGVPLSQPPVAAAAAAAAVAPASAVVPLPPSGIDLEHLEQLSKQS
CYDSGIDIREPVPNVQPIPKKTVYSDADIVLSSDWVPPKTIVPTHFSESP
PRSTILGQSLDAGTGGAGGVRKKTSSVSFSVDDEAAQQAQAQSAALAVTD
KQADKKNKMLKRLSYPLTWVEGLTGEGGAVPPGGVGSGSLNKSGDTDSAP
NTGDSNQSVFSKVFSRRSSIGTFIRPHSSEGTSSSTKLKEAKQAPKLDYR
SMVSMDDKPELFISVDKLIPRPARACLDPPLYLRLRMGKPIGKAIPLPTS
VMSYGKNKLRAEYWFSVPKNRVDELYRFINTWVKHLYGELDEEQIKARGF
ELIQEDTEWTKSGTTKAGMGGGSQDGEEISDLTRESWEVLSMSTDEYRKT
SLFATGSFDLDFPIPDLIGKTEILTEEHREKLCSHLPARAEGYSWSLIFS
TSQHGFALNSLYRKMARLESPVLIVIEDTEHNVFGALTSCSLHVSDHFYG
TGESLLYKFNPSFKVFHWTGENMYFIKGNMESLSIGAGDGRFGLWLDGDL
NQGRSQQCSTYGNEPLAPQEDFVIKTLECWAFV*

SD08996.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:02:35
Subject Length Description Subject Range Query Range Score Percent Strand
mtd-PG 1033 CG32464-PG 1..1033 1..1033 5325 100 Plus
mtd-PO 1025 CG32464-PO 1..1025 1..1033 5262 99.2 Plus
mtd-PJ 1270 CG32464-PJ 258..1270 13..1033 5195 99.2 Plus
mtd-PB 1270 CG32464-PB 258..1270 13..1033 5195 99.2 Plus
mtd-PN 1270 CG32464-PN 258..1270 13..1033 5195 99.2 Plus