BDGP Sequence Production Resources |
Search the DGRC for SD09476
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 94 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | sgl-RA |
Protein status: | SD09476.pep: gold |
Preliminary Size: | 2294 |
Sequenced Size: | 2276 |
Gene | Date | Evidence |
---|---|---|
CG10072 | 2001-07-04 | Blastp of sequenced clone |
CG10072 | 2003-01-01 | Sim4 clustering to Release 3 |
sgl | 2008-04-29 | Release 5.5 accounting |
sgl | 2008-08-15 | Release 5.9 accounting |
sgl | 2008-12-18 | 5.12 accounting |
2276 bp (2276 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052137
> SD09476.complete CTCCGCCGCCGCGTGAAGTCAGATTTCTCCGAGCGCTCAAACGAACAGCA CGCGACATTCGCCGGAAAAAAAAACGAGAACCATAAGTTGTGGGAAATTC GCACAAGGGACAGAAGGAAGAAGAAGCAGCAGCAGACGAAAGGGACGAAC GGCGAAGCAAAACAAATCGAGCGACGAATAGCGGTGTGCAACGAAATGAA GGTCTGCTGCATTGGCGCTGGTTATGTCGGCGGTCCGACCTGCGCGGTTA TGGCGCTCAAATGCCCCGATATCGTGATAACTCTGGTGGACAAGAGCTCC GAGCGGATTGCCCAGTGGAATTCGGATAAGTTGCCCATTTACGAGCCCGG CTTGGATGAGGTGGTGAAGAAGTGCCGCAATGTGAACCTCTTCTTCTCAA CGGACATCGAGACGGCCATCAAGGAGGCGGACCTCATCTTCATCTCGGTG AACACGCCCACAAAAACCTGCGGCAATGGCAAGGGCCGAGCGGCGGACCT CAAGTACGTGGAGAGCGCAGCGCGGATGATCGCCGAGATCGCGCAGTCCA ACAAGATTGTGGTGGAGAAGAGCACGGTGCCCGTGCGGGCGGCGGAGAGC ATCATGCACATACTGCGAGCGAACCAGAAGCCGGGCATCCACTACGACAT ACTGTCCAATCCCGAGTTCCTCGCCGAGGGCACCGCCATCAATGACCTGC TAAATGCGGATCGTGTGCTGATCGGCGGCGAGGAGACGCCCGAGGGCCAC CAGGCGGTGGAGAAGCTGTCGTGGATCTACGAGCACTGGATACCCAAGCA GAACATACTCACGACGAACACGTGGAGCAGCGAGCTGTCTAAGCTGGCGG CCAACGCATTCCTCGCCCAGCGAATCTCCAGCATCAATTCGCTGTCGGCA GTGTGCGAGGCCACGGGCGCAGATGTTTCCGAGGTGGCGAGGGCCGTGGG TCTAGACTCTCGCATCGGTTCCAAGTTCCTGCAGGCGTCGGTGGGCTTCG GCGGCAGTTGCTTTCAGAAGGACATCCTCAATCTGATTTACATCTGCGAG AACCTCAATCTGCCCGAGGTGGCCGCCTACTGGCAGCAGGTGATCGACAT GAATGAGTACCAGAAGCGTCGATTCTCGCAGAAAATCATCGAGAGTCTGT TCAACACGGTGTCGGACAAGCGGATAGCGATCCTGGGCTTTGCCTTCAAG AAGAATACGGGCGATACGCGCGAAACAGCCGCCATTACCGTGTGCCAAAC TCTGCTGGAGGAGGGCGCCGCGCTGGATATCTACGATCCGAAGGTGGAAC CCGAGCAGATCATCGATGACCTCACGCATCCCAGTGTCACGGAATCGCCG GAGAAGGTGAAGAAGGCGGTGCAGATCCACAGTGATCCGTACAGCGCAGT GCGTGCCACACATGCGTTGGTCATCTGCACGGAGTGGGATGAGTTTGTTG ATCTGGACTTTAAGCGCATATACCAATCGATGATGAAGCCAGCCTACATC TTCGACGGCCGCAAGATTCTCGACCACGAGCGCCTGCAGCAGATCGGCTT CCACGTCCAGACCATCGGCAAGAAGTACCAGCGCACCGGACTGCTCCGCT CGTGGGGCATTGTGCCGCAGCTTTAGGCGCGTCGGGCGGCGGAGGTGGTG GCATTTACACTTAAAGTTGGCGAAATTTCCAGTATTTGCGAGACTAAACT GTAAATATCCGTATTCTTTTCTGTAGCTGAGTGTATGTTAGATTGGGTCG ATTAAGCTTAAGTTGAATCATGTTTAGGAGAATAGAATCGTTTCAAATCA TCAGAGGACTCTGTCAGTTTTAAGTGAAAAGTAAAGTTGAATTCTTGCAT TTTGTATATTAGTTTCTAAAGGATATAAGCTTTTAAAACATTTCTGTATA TAACTAGAAAGCGAATTACTTATTTGAACAACATAAGGCAATGATTGATT AACCACAAAGTTATAAAACGTAGCAACTATTTTTGATCAGACAATATACT ATTATGTAGCTTTCTTCATATCGACCCAAACTAACGAGTGTGTTTCTAAA TAGTTAAAGTATTCAACTAGGCACACCCGCAAGGGAAACCCTCGAACCGT ATTTGTATTCATATTCCTATACCTATTCCCCTATCGATCCGCCACTCGAG GATCGGTAGTTGCAATATTAAGCCCCAACAGGACAGTAATCCCCTCCTGC GGCGGGCCAATAAAAACCAGCATTTACACGAGAGCATGTAAATTTTTATA ATAAAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sgl-RA | 2377 | sgl-RA | 113..2372 | 1..2260 | 11165 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 6951847..6953621 | 2258..484 | 8635 | 99.1 | Minus |
chr3L | 24539361 | chr3L | 6956673..6957016 | 345..1 | 1600 | 98.3 | Minus |
chr3L | 24539361 | chr3L | 6954103..6954244 | 485..344 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 6959552..6961328 | 2260..484 | 8750 | 99.5 | Minus |
3L | 28110227 | 3L | 6964397..6964741 | 345..1 | 1725 | 100 | Minus |
3L | 28110227 | 3L | 6961810..6961951 | 485..344 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 6952652..6954428 | 2260..484 | 8750 | 99.4 | Minus |
3L | 28103327 | 3L | 6957497..6957841 | 345..1 | 1725 | 100 | Minus |
3L | 28103327 | 3L | 6954910..6955051 | 485..344 | 710 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 6951870..6953620 | 485..2235 | 99 | <- | Minus |
chr3L | 6954104..6954242 | 346..484 | 100 | <- | Minus |
chr3L | 6956673..6957016 | 1..345 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgl-RA | 1..1431 | 196..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgl-RA | 1..1431 | 196..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgl-RA | 1..1431 | 196..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgl-RA | 1..1431 | 196..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgl-RA | 1..1431 | 196..1626 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgl-RA | 62..2319 | 1..2258 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgl-RA | 62..2319 | 1..2258 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgl-RA | 18..2275 | 1..2258 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgl-RA | 62..2319 | 1..2258 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
sgl-RA | 18..2275 | 1..2258 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6959554..6961327 | 485..2258 | 99 | <- | Minus |
3L | 6961811..6961949 | 346..484 | 100 | <- | Minus |
3L | 6964397..6964741 | 1..345 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6959554..6961327 | 485..2258 | 99 | <- | Minus |
3L | 6961811..6961949 | 346..484 | 100 | <- | Minus |
3L | 6964397..6964741 | 1..345 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6959554..6961327 | 485..2258 | 99 | <- | Minus |
3L | 6961811..6961949 | 346..484 | 100 | <- | Minus |
3L | 6964397..6964741 | 1..345 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 6952654..6954427 | 485..2258 | 99 | <- | Minus |
arm_3L | 6954911..6955049 | 346..484 | 100 | <- | Minus |
arm_3L | 6957497..6957841 | 1..345 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6952654..6954427 | 485..2258 | 99 | <- | Minus |
3L | 6954911..6955049 | 346..484 | 100 | <- | Minus |
3L | 6957497..6957841 | 1..345 | 100 | Minus |
Translation from 0 to 1625
> SD09476.hyp LRRRVKSDFSERSNEQHATFAGKKNENHKLWEIRTRDRRKKKQQQTKGTN GEAKQIERRIAVCNEMKVCCIGAGYVGGPTCAVMALKCPDIVITLVDKSS ERIAQWNSDKLPIYEPGLDEVVKKCRNVNLFFSTDIETAIKEADLIFISV NTPTKTCGNGKGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPVRAAES IMHILRANQKPGIHYDILSNPEFLAEGTAINDLLNADRVLIGGEETPEGH QAVEKLSWIYEHWIPKQNILTTNTWSSELSKLAANAFLAQRISSINSLSA VCEATGADVSEVARAVGLDSRIGSKFLQASVGFGGSCFQKDILNLIYICE NLNLPEVAAYWQQVIDMNEYQKRRFSQKIIESLFNTVSDKRIAILGFAFK KNTGDTRETAAITVCQTLLEEGAALDIYDPKVEPEQIIDDLTHPSVTESP EKVKKAVQIHSDPYSAVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYI FDGRKILDHERLQQIGFHVQTIGKKYQRTGLLRSWGIVPQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sgl-PA | 476 | CG10072-PA | 1..476 | 66..541 | 2454 | 100 | Plus |
Translation from 195 to 1625
> SD09476.pep MKVCCIGAGYVGGPTCAVMALKCPDIVITLVDKSSERIAQWNSDKLPIYE PGLDEVVKKCRNVNLFFSTDIETAIKEADLIFISVNTPTKTCGNGKGRAA DLKYVESAARMIAEIAQSNKIVVEKSTVPVRAAESIMHILRANQKPGIHY DILSNPEFLAEGTAINDLLNADRVLIGGEETPEGHQAVEKLSWIYEHWIP KQNILTTNTWSSELSKLAANAFLAQRISSINSLSAVCEATGADVSEVARA VGLDSRIGSKFLQASVGFGGSCFQKDILNLIYICENLNLPEVAAYWQQVI DMNEYQKRRFSQKIIESLFNTVSDKRIAILGFAFKKNTGDTRETAAITVC QTLLEEGAALDIYDPKVEPEQIIDDLTHPSVTESPEKVKKAVQIHSDPYS AVRATHALVICTEWDEFVDLDFKRIYQSMMKPAYIFDGRKILDHERLQQI GFHVQTIGKKYQRTGLLRSWGIVPQL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10882-PA | 476 | GF10882-PA | 1..476 | 1..476 | 2509 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15016-PA | 476 | GG15016-PA | 1..476 | 1..476 | 2542 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16103-PA | 476 | GH16103-PA | 1..476 | 1..476 | 2485 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
sgl-PA | 476 | CG10072-PA | 1..476 | 1..476 | 2454 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12367-PA | 476 | GI12367-PA | 1..476 | 1..476 | 2482 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15063-PA | 430 | GL15063-PA | 1..430 | 1..476 | 2039 | 83.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10050-PA | 476 | GA10050-PA | 1..476 | 1..476 | 2482 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13805-PA | 476 | GM13805-PA | 1..476 | 1..476 | 2555 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13103-PA | 476 | GD13103-PA | 1..476 | 1..476 | 2555 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12259-PA | 476 | GJ12259-PA | 1..476 | 1..476 | 2491 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17198-PA | 476 | GK17198-PA | 1..476 | 1..476 | 2498 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20458-PA | 476 | GE20458-PA | 1..476 | 1..476 | 2548 | 99.8 | Plus |