BDGP Sequence Production Resources |
Search the DGRC for SD09607
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 96 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | Surf6-RA |
Protein status: | SD09607.pep: gold |
Preliminary Size: | 1267 |
Sequenced Size: | 1175 |
Gene | Date | Evidence |
---|---|---|
CG4510 | 2001-01-01 | Release 2 assignment |
CG4510 | 2002-06-12 | Blastp of sequenced clone |
Surf6 | 2008-04-29 | Release 5.5 accounting |
Surf6 | 2008-08-15 | Release 5.9 accounting |
Surf6 | 2008-12-18 | 5.12 accounting |
1175 bp (1175 high quality bases) assembled on 2002-06-12
GenBank Submission: AY122261
> SD09607.complete CCTTGCTTAGCTGCACGTGTGCGTGCGTAAATAATAGTTTTATTGTTATT TTACTCTCGAAAATGACCCAGGCGGAGATCGTGAAATGTCTGCGGGAGGA GTATGAAATCGAACACAACAAGGATCAGAAGCCGGAGAAGGAGGACCTGC CCGCCATCACCAAAAAGTTCTATCAGCGAGTCTTGGAACTGCTGACCATT CACAAAGTGCCCTACTCCAAACAAGAAGATGAGGAGACCTACGAAGAGTA CCTGCTGTCGGACACGGAGGAATCGGGAAACAAGAAAAAGAAACAACAGG GAAAACTGAAAAACCAAGACTCCGACGACGAGGATGTAGAGGCACGCATT GCCTCCATCAAGAACAAGCTGCGCCAGAAAAAGGGACCCACAACGGAGCG ACAGCAGAAGCGACGCGAATCTAAAAAGCTTAAACGCAGCAAGGGCGTCC AGAAACTGCTCCTCTCCTCGGCCAAAAACCTCAAAAACGAGAACGTCAAG CACCAGAAACTGAAGAATGGCGTGGTGAAATCAGAACAGGAGACGGAGGA CAGCAAGGAACAGATCCAGCCGGTCAAGGTGCAACCGGTTTACAACCAGG AGGCCAAGATCGTCTACTCCAAGGTGGACTTTGCCGCCAATCCTGGAGGC AAAGCCAAGAAGTCTCACCAAAACCCCAAGGAGATTCTGAAGAAGCTGCG CGACACCAAGAAGCACCTAACCGAACTGCGCGAACAGGGCGAAACGGACA AGGCGGCGGAGATCCAGACGGACATCGCCTGGCGCAACGCATTCGACAAG GTCGAGGGCAAGAAGGTCAAGGACGACACCAAGCTGCTGCAAAAGGCCAT CAAGAAGCGGCGCGTGGAGAAGAAGAAGTCCAAGACCAAGTGGACTGAAC GCAAGCAGAAGGTGGAGCACGACAAGGAAAAGAGGCAAAAGAAGCGACAG GAGAACCTGGAGAAGCGCAGCAAGGACAAGAAGAACCGGAAACTAAAGAC GGCCAGCAAGAGGGGTCGCATCATACCCGGCTATTAACTATGCTTACTAT AGCCCTTAAGTGTAAAGTAGTGTAAATGTATGCCACGTTGAAATTCAACT CAGAATGCTTTAGAAAAAAAGTGATCTTTCTGAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15727598..15728501 | 229..1132 | 100 | <- | Minus |
chr3R | 15728556..15728783 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Surf6-RA | 1..975 | 63..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Surf6-RA | 1..975 | 63..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Surf6-RA | 1..975 | 63..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Surf6-RA | 1..975 | 63..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Surf6-RA | 1..975 | 63..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Surf6-RA | 18..1149 | 1..1132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Surf6-RA | 18..1149 | 1..1132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Surf6-RA | 18..1149 | 1..1132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Surf6-RA | 18..1149 | 1..1132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Surf6-RA | 19..1150 | 1..1132 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19903665..19904568 | 229..1132 | 100 | <- | Minus |
3R | 19904623..19904850 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19903665..19904568 | 229..1132 | 100 | <- | Minus |
3R | 19904623..19904850 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19903665..19904568 | 229..1132 | 100 | <- | Minus |
3R | 19904623..19904850 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15729387..15730290 | 229..1132 | 100 | <- | Minus |
arm_3R | 15730345..15730572 | 1..228 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19644496..19645399 | 229..1132 | 100 | <- | Minus |
3R | 19645454..19645681 | 1..228 | 100 | Minus |
Translation from 2 to 1036
> SD09607.hyp LLSCTCACVNNSFIVILLSKMTQAEIVKCLREEYEIEHNKDQKPEKEDLP AITKKFYQRVLELLTIHKVPYSKQEDEETYEEYLLSDTEESGNKKKKQQG KLKNQDSDDEDVEARIASIKNKLRQKKGPTTERQQKRRESKKLKRSKGVQ KLLLSSAKNLKNENVKHQKLKNGVVKSEQETEDSKEQIQPVKVQPVYNQE AKIVYSKVDFAANPGGKAKKSHQNPKEILKKLRDTKKHLTELREQGETDK AAEIQTDIAWRNAFDKVEGKKVKDDTKLLQKAIKKRRVEKKKSKTKWTER KQKVEHDKEKRQKKRQENLEKRSKDKKNRKLKTASKRGRIIPGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Surf6-PA | 324 | CG4510-PA | 1..324 | 21..344 | 1649 | 100 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1374..1659 | 27..341 | 182 | 23.5 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1374..1659 | 27..341 | 182 | 23.5 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1328..1619 | 32..336 | 168 | 21.3 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1328..1619 | 32..336 | 168 | 21.3 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1323..1570 | 76..336 | 159 | 23.8 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1323..1570 | 76..336 | 159 | 23.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 446..747 | 31..332 | 154 | 15.6 | Plus |
eIF5B-PD | 1090 | CG10840-PD | 74..376 | 41..337 | 154 | 21.1 | Plus |
Translation from 62 to 1036
> SD09607.pep MTQAEIVKCLREEYEIEHNKDQKPEKEDLPAITKKFYQRVLELLTIHKVP YSKQEDEETYEEYLLSDTEESGNKKKKQQGKLKNQDSDDEDVEARIASIK NKLRQKKGPTTERQQKRRESKKLKRSKGVQKLLLSSAKNLKNENVKHQKL KNGVVKSEQETEDSKEQIQPVKVQPVYNQEAKIVYSKVDFAANPGGKAKK SHQNPKEILKKLRDTKKHLTELREQGETDKAAEIQTDIAWRNAFDKVEGK KVKDDTKLLQKAIKKRRVEKKKSKTKWTERKQKVEHDKEKRQKKRQENLE KRSKDKKNRKLKTASKRGRIIPGY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17350-PA | 329 | GF17350-PA | 1..329 | 1..324 | 1089 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\Surf6-PA | 324 | GG15764-PA | 1..324 | 1..324 | 1554 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23294-PA | 328 | GH23294-PA | 33..328 | 36..324 | 930 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Surf6-PA | 324 | CG4510-PA | 1..324 | 1..324 | 1649 | 100 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1374..1659 | 7..321 | 182 | 23.5 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1374..1659 | 7..321 | 182 | 23.5 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1328..1619 | 12..316 | 168 | 21.3 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1328..1619 | 12..316 | 168 | 21.3 | Plus |
rudhira-PE | 2075 | CG43154-PE | 1323..1570 | 56..316 | 159 | 23.8 | Plus |
rudhira-PC | 2075 | CG43154-PC | 1323..1570 | 56..316 | 159 | 23.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 446..747 | 11..312 | 154 | 15.6 | Plus |
eIF5B-PD | 1090 | CG10840-PD | 74..376 | 21..317 | 154 | 21.1 | Plus |
eIF5B-PE | 1108 | CG10840-PE | 74..376 | 21..317 | 154 | 21.1 | Plus |
eIF5B-PF | 1144 | CG10840-PF | 74..376 | 21..317 | 154 | 21.1 | Plus |
eIF5B-PC | 1144 | CG10840-PC | 74..376 | 21..317 | 154 | 21.1 | Plus |
eIF5B-PB | 1144 | CG10840-PB | 74..376 | 21..317 | 154 | 21.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10326-PA | 344 | GI10326-PA | 10..344 | 7..324 | 843 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12412-PA | 316 | GL12412-PA | 1..316 | 10..324 | 954 | 71.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27658-PA | 326 | GA27658-PA | 5..326 | 4..324 | 965 | 70.8 | Plus |
Dpse\Surf6-PA | 326 | GA18228-PA | 5..326 | 4..324 | 963 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26886-PA | 324 | GM26886-PA | 1..324 | 1..324 | 1478 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15089-PA | 325 | GD15089-PA | 1..325 | 1..324 | 1459 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10181-PA | 327 | GJ10181-PA | 1..327 | 1..324 | 987 | 68.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\Surf6-PA | 326 | GK22805-PA | 1..326 | 1..324 | 1041 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25105-PA | 324 | GE25105-PA | 1..324 | 1..324 | 1565 | 94.8 | Plus |