BDGP Sequence Production Resources |
Search the DGRC for SD09738
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 97 |
Well: | 38 |
Vector: | pOT2 |
Associated Gene/Transcript | uzip-RA |
Protein status: | SD09738.pep: gold |
Preliminary Size: | 2554 |
Sequenced Size: | 2494 |
Gene | Date | Evidence |
---|---|---|
CG3533 | 2001-07-04 | Blastp of sequenced clone |
CG3533 | 2003-01-01 | Sim4 clustering to Release 3 |
uzip | 2008-04-29 | Release 5.5 accounting |
uzip | 2008-08-15 | Release 5.9 accounting |
uzip | 2008-12-18 | 5.12 accounting |
2494 bp (2494 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052139
> SD09738.complete TCCTCTCTTCGAATCAGTTCTTGGTAAAACCAAACTTCAATAAACCGTTG GGTTAATGCGCGGATGTGCGGATACTTTCAGTTAATTTTGAATTTTTCGA GGAACGGTGAAGGTCCGCGCTTGAATCAAATCCTAAGTGAGGGACTCCGA ATAGGATTCATTGGATGACAAACTAACGTGCAGCCAGGAATTATCGATTC AGATCCCACCTCTTTTGGGCACAAACTGGATTGACAAAAGTCAGAGTCCA ATCACTACGAAGTACAATCAGCACGATGACATCAAATAGTTGTTTAATCA GTCTAGGCCTTCTCCTGGTCCTTATTCAAATTCTAGCTCCAGCAAAGGCT GCGGAGCACTCAGTGTTCACCCACAAAAACGCATCATCGGTCTTGGGTCA ATTGGTTACCTCGAGTACCCTAGTATGGGAAAGCTATGACCCCAAGGATG CTACACAGTTGCAGTTCGCCGTGGAGGGCGGAAAGTACGTTACTGAGGAT GAGCATTACCCCATGTACGTATGTCGTGTACCAATCGATGGTATCCAAGT GTCCGGCCATACCGAGAAAATCCTTCAGAGACACGTCTGCCTTGCGGCCC ACTATAAGCACGGAAAATACGACAACTTCGATGTCCTTATGAACAAGGGT CACCTGGGGAAGGTTGGCTGGCGTCATTGGCGTAAGTTCGATGCTGGTGT TCCCGTCGGTGCCATACGCATTGGAGATGACTCTTACATTGGTCGCCATC GGGCCCCAAGTCAACCGAACAAGGACGGGGTCGTCACCCATTGGGGAGCA GACTTCAATCTGGGCCACTTGGAGCCGGTGGGTCTGGGAAAAATTAGGGT CATCGAAGCCGAACGTGAGAAGTACTACGACGACGGCGAGGTTTTAGTCG AAACAGAGCCCTTCCGATACGAGCTCAGGGACATCAAACTGGATCGATTG CGCACTGATATTCAAGAGAATATGACTGAACTGGTTACTAGGAAGCTTGA AAATCTGGAAGATAAATATAGTACTGTGGAGACTATTCTAAGCTATACCT TTAACTATAATCAATATTGGGGATCCCACGAGGGTGTTGCTCGTGGTTTA CCAACAAAAATATTTGAAAAAGATGAAGCCGTTCCGGCTGAAATTAATTG GGCCTTAAAACACACCGAAAAGCGATCGGAAAACAAGGCAGTGCACACGA AACTTTGGCCTGGTACAGCAATTAATGTTACGCTACGTGGCAATTATGTG ACCCTGGAGGCGCCGTACAGTGGCAAGCTCTTTGCTTTTTATTACGGAAG CGATGAAAGTGTTTCCCGAAAGATCAGCGCAGAGGTGCGAAAGAGCTACT TGAAGGAGGTGAAGCTGGAGTTCAGCCCCGTCTACTGGATTGAGAACGGT ACTCTGGTACCCACAACGACCACCACAACGACCACATCCACATCGACCAC GACACATGCCACCACAACCAGCACCAACGAGCCGACGCCCATAAATGAGC CCCCGCTGGTCCATATGAAGGACAACGGTGTGCAGCATTCAGGTCCCGAT ACGCTGGAGAAGACCTTGCATGACTCCCCGTCCAGCAACGAATTAAATTC GCACGAGGCTCCAGAGAACATGTCCTCCGACCCGGGAAAGGATGTGGCGC TGGCAGGGTTCGGAGTCAACGCAGCGGGGTCAACATTTATTGCGGGGTCG GCTTTATTAACTCTACTTTTAACAATTTTTTTGAGTCTGTAGATGAAATT GAGCTGTGGACTCAGTATAGAGTTTAATTGTTGTTGTTGTACCTGTTGTA CCCGTCTTTGAGAGCGTCAGAGAAACGTAATAAGCAGATAGACATTGTAT GAATATATAAACTCCAAGAACCGGGAGCGAAAAGCGAAAAGCGAAAAGCA AAAGTCGATATTTTTTATACTTGTCCCAAGGCTTCTTCTTTAACACGCAT GCAAGCGAAAGCGAATTTAAATGATCATTAAAATAAACGTAATACATTCC TAAACAGAACCTCTTACAATCGGAAATAAATCAAAAGTATAATTAAAAAT AAATTTATTCATATTTTTATGTAGAAATATTTTACAAGTTTTTTTTATTT GCATGGATTTAAATGGCTTTTCATTTTTGTAGTTAGTAAGCAGCATTAAC AGCAAGTAGAAAAAATATTAAACTTGAATTGACATTTGCTTAGGGATGGT ATTATAGATCACGCTCTCTAAAATGATGTATGTATAGTATACATGTATGT CAAATATGTAAACCTATGTATAACATAAGTACGAGTATGTATGCTATTTT TTAGGCCAAACACTCAAAATATGTAAAATAGATATTTTTATTTGAGCCCT TTGATTTAAAGTATGATTTGCGTTTATTTAAGGCTAATCTCTATCATAAT TAATTTGATTTTAATTAAAACTTCATTAAAGAAACAATGAATATATATAA ATAAAAGGCTTGTAAATGAAAATCGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
uzip-RA | 2548 | uzip-RA | 68..2545 | 1..2478 | 12360 | 99.9 | Plus |
uzip.d | 2519 | uzip.d | 173..2519 | 129..2475 | 11705 | 99.9 | Plus |
uzip.c | 2472 | uzip.c | 126..2472 | 129..2475 | 11705 | 99.9 | Plus |
uzip.d | 2519 | uzip.d | 14..141 | 1..128 | 640 | 100 | Plus |
uzip.c | 2472 | uzip.c | 14..125 | 1..112 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20914876..20916018 | 1333..2475 | 5715 | 100 | Plus |
chr2R | 21145070 | chr2R | 20913633..20914416 | 201..984 | 3920 | 100 | Plus |
chr2R | 21145070 | chr2R | 20914473..20914824 | 984..1335 | 1760 | 100 | Plus |
chr2R | 21145070 | chr2R | 20897999..20898126 | 1..128 | 640 | 100 | Plus |
chr2R | 21145070 | chr2R | 20898582..20898655 | 129..202 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 25028944..25030089 | 1333..2478 | 5700 | 99.8 | Plus |
2R | 25286936 | 2R | 25027701..25028484 | 201..984 | 3920 | 100 | Plus |
2R | 25286936 | 2R | 25028541..25028892 | 984..1335 | 1760 | 100 | Plus |
2R | 25286936 | 2R | 25012050..25012177 | 1..128 | 640 | 100 | Plus |
2R | 25286936 | 2R | 25012633..25012706 | 129..202 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 25030143..25031288 | 1333..2478 | 5700 | 99.8 | Plus |
2R | 25260384 | 2R | 25028900..25029683 | 201..984 | 3920 | 100 | Plus |
2R | 25260384 | 2R | 25029740..25030091 | 984..1335 | 1760 | 100 | Plus |
2R | 25260384 | 2R | 25013249..25013376 | 1..128 | 640 | 100 | Plus |
2R | 25260384 | 2R | 25013832..25013905 | 129..202 | 370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3701..3940 | 2221..2456 | 146 | 57.3 | Plus |
S2 | 1735 | S2 S2 1735bp | 1590..1653 | 2087..2024 | 122 | 65.6 | Minus |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1015..1081 | 2024..2090 | 117 | 71 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20897999..20898126 | 1..128 | 100 | -> | Plus |
chr2R | 20898582..20898655 | 129..202 | 100 | -> | Plus |
chr2R | 20913635..20914416 | 203..984 | 100 | -> | Plus |
chr2R | 20914474..20914823 | 985..1334 | 100 | -> | Plus |
chr2R | 20914878..20915580 | 1335..2037 | 95 | == | Plus |
chr2R | 20915644..20916018 | 2101..2475 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uzip-RA | 1..1467 | 276..1742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uzip-RA | 1..1467 | 276..1742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uzip-RA | 1..1467 | 276..1742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uzip-RA | 1..1467 | 276..1742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uzip-RA | 1..1467 | 276..1742 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uzip-RA | 1..2475 | 1..2475 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uzip-RA | 1..2475 | 1..2475 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uzip-RA | 1..2463 | 13..2475 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uzip-RA | 1..2475 | 1..2475 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
uzip-RA | 1..2463 | 13..2475 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 25012050..25012177 | 1..128 | 100 | -> | Plus |
2R | 25012633..25012706 | 129..202 | 100 | -> | Plus |
2R | 25027703..25028484 | 203..984 | 100 | -> | Plus |
2R | 25028542..25028891 | 985..1334 | 100 | -> | Plus |
2R | 25028946..25030086 | 1335..2475 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 25012050..25012177 | 1..128 | 100 | -> | Plus |
2R | 25012633..25012706 | 129..202 | 100 | -> | Plus |
2R | 25027703..25028484 | 203..984 | 100 | -> | Plus |
2R | 25028542..25028891 | 985..1334 | 100 | -> | Plus |
2R | 25028946..25030086 | 1335..2475 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 25012050..25012177 | 1..128 | 100 | -> | Plus |
2R | 25012633..25012706 | 129..202 | 100 | -> | Plus |
2R | 25027703..25028484 | 203..984 | 100 | -> | Plus |
2R | 25028542..25028891 | 985..1334 | 100 | -> | Plus |
2R | 25028946..25030086 | 1335..2475 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20915226..20916007 | 203..984 | 100 | -> | Plus |
arm_2R | 20899573..20899700 | 1..128 | 100 | -> | Plus |
arm_2R | 20900156..20900229 | 129..202 | 100 | -> | Plus |
arm_2R | 20916065..20916414 | 985..1334 | 100 | -> | Plus |
arm_2R | 20916469..20917609 | 1335..2475 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 25013850..25013923 | 129..202 | 100 | -> | Plus |
2R | 25013267..25013394 | 1..128 | 100 | -> | Plus |
2R | 25028920..25029701 | 203..984 | 100 | -> | Plus |
2R | 25029759..25030108 | 985..1334 | 100 | -> | Plus |
2R | 25030163..25031303 | 1335..2475 | 99 | Plus |
Translation from 275 to 1741
> SD09738.pep MTSNSCLISLGLLLVLIQILAPAKAAEHSVFTHKNASSVLGQLVTSSTLV WESYDPKDATQLQFAVEGGKYVTEDEHYPMYVCRVPIDGIQVSGHTEKIL QRHVCLAAHYKHGKYDNFDVLMNKGHLGKVGWRHWRKFDAGVPVGAIRIG DDSYIGRHRAPSQPNKDGVVTHWGADFNLGHLEPVGLGKIRVIEAEREKY YDDGEVLVETEPFRYELRDIKLDRLRTDIQENMTELVTRKLENLEDKYST VETILSYTFNYNQYWGSHEGVARGLPTKIFEKDEAVPAEINWALKHTEKR SENKAVHTKLWPGTAINVTLRGNYVTLEAPYSGKLFAFYYGSDESVSRKI SAEVRKSYLKEVKLEFSPVYWIENGTLVPTTTTTTTTSTSTTTHATTTST NEPTPINEPPLVHMKDNGVQHSGPDTLEKTLHDSPSSNELNSHEAPENMS SDPGKDVALAGFGVNAAGSTFIAGSALLTLLLTIFLSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13359-PA | 479 | GF13359-PA | 1..479 | 1..488 | 2047 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23028-PA | 488 | GG23028-PA | 1..488 | 1..488 | 2533 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22655-PA | 504 | GH22655-PA | 27..477 | 22..469 | 1487 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
uzip-PB | 488 | CG3533-PB | 1..488 | 1..488 | 2568 | 100 | Plus |
uzip-PA | 488 | CG3533-PA | 1..488 | 1..488 | 2568 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14153-PA | 491 | GI14153-PA | 1..491 | 1..488 | 1705 | 68 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17642-PA | 488 | GL17642-PA | 1..478 | 1..478 | 2057 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17506-PA | 492 | GA17506-PA | 1..482 | 1..478 | 2037 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11920-PA | 488 | GM11920-PA | 1..488 | 1..488 | 2587 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11916-PA | 488 | GD11916-PA | 1..488 | 1..488 | 2589 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21020-PA | 496 | GJ21020-PA | 18..494 | 14..487 | 1687 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21574-PA | 490 | GK21574-PA | 1..485 | 6..487 | 1922 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14462-PA | 488 | GE14462-PA | 1..474 | 1..474 | 2370 | 97 | Plus |
Translation from 275 to 1741
> SD09738.hyp MTSNSCLISLGLLLVLIQILAPAKAAEHSVFTHKNASSVLGQLVTSSTLV WESYDPKDATQLQFAVEGGKYVTEDEHYPMYVCRVPIDGIQVSGHTEKIL QRHVCLAAHYKHGKYDNFDVLMNKGHLGKVGWRHWRKFDAGVPVGAIRIG DDSYIGRHRAPSQPNKDGVVTHWGADFNLGHLEPVGLGKIRVIEAEREKY YDDGEVLVETEPFRYELRDIKLDRLRTDIQENMTELVTRKLENLEDKYST VETILSYTFNYNQYWGSHEGVARGLPTKIFEKDEAVPAEINWALKHTEKR SENKAVHTKLWPGTAINVTLRGNYVTLEAPYSGKLFAFYYGSDESVSRKI SAEVRKSYLKEVKLEFSPVYWIENGTLVPTTTTTTTTSTSTTTHATTTST NEPTPINEPPLVHMKDNGVQHSGPDTLEKTLHDSPSSNELNSHEAPENMS SDPGKDVALAGFGVNAAGSTFIAGSALLTLLLTIFLSL*