BDGP Sequence Production Resources |
Search the DGRC for SD09769
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 97 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | Ndfip-RA |
Protein status: | SD09769.pep: gold |
Preliminary Size: | 2140 |
Sequenced Size: | 2107 |
Gene | Date | Evidence |
---|---|---|
CG32177 | 2001-11-09 | Blastp of sequenced clone |
CG32177 | 2008-04-29 | Release 5.5 accounting |
CG32177 | 2008-08-15 | Release 5.9 accounting |
Krn | 2008-08-15 | Release 5.9 accounting |
CG32177 | 2008-12-18 | 5.12 accounting |
Krn | 2008-12-18 | 5.12 accounting |
2107 bp (2107 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069849
> SD09769.complete TGCATTTGTTTTTTTCGCTTCGCTCGCGAAGTGAGCCCAGTTTTAAATTA TTTAAATTGCGTATAGTGAAGCCACTTGAAAGCGAAACGCCTACTGTCGC AGTTCTGCCAAAAAACCAACAGTATTAGCTGTGTGCGTGTTTGGCAACAA CAAGTCAACAAAATTCGAACAAAATCAATAAAACGGAAACGTGAGAGAGC GCTGCGCAAAAGAGAAAAGCGAACGCAATCGCAATCGACCAACGCATAGA AGAAAACAAGTCATGCCGCACAACAACCAGCCGTCTCCCGGGGATGATCA GTTGGGACCGCCAAAGGCGGACTTCAGTGCTCCGCCACCGTACGAGGCGA ACGTTGGCCATGGCCAGCAGGTAGCACTGCCGGCTCAGATGCCACCGCTG GCCTTGGCCACACCCGATCCCAGTCAGATCCCGATACAGATGCAAGTGCA GCTGCCGAGCCAGGCGGACCTTATGAATGCACAACTGCCGCCAGAAATAC ACGGGAAGTTGCCCACGTACGAGGAGGTTCAAATGGAAAAGTCGCTGAAC GGAGAGCTGCCGCCCGCCTTTTTGACTTTACCCTCCTCGCAGCAGCTACC GCCGCCGCCGAATCCGCTACTGCCGCCAAATCCGCTGCGCGATGGAGCCG CTGCTGTGCGATCTGCCCAGCCGGCACTCACGTTCATCGCCATCGATGCC AGCGATCCGGAAAATAGTCTGTCCACCACCGACAACTTGCTCGGCACGGA CATCATGTTCATCACGGCCTTCATTGTGGCCTTTTTGTTTAACTGGATCG GCTTCCTGATGCTCACCTGTTTCTGTCACACAATCGCCGCCCGATATGGA GCATTGTCGGGATTCGGATTGTCGCTGGCTAAATGGACGCTGATCGTGAA GCACTCGACGGACTTGGCCTCGCACGAAAACTCCTGGCTCTGGTGGCTGA TCTGTGCCTTTGGCTTCCTGATCAGCATACGCGCTTTAATACAGTATGTC AGCATCAAGCGATCGTGGCGCCTCCTTTCCGCCTCTGCCCAGGAACGGCT GCTATTCTTTTACTAGGTGCACCTGGAGGCTTTCCAGTGGTCGTCTTGTA AATACGTTGTGGGTGGCTAGGAGGCTCGAATGCTACCAACCAACCGATCC CAACACCCTCTATTCCCCAGACCCAGCACACGAAAAATCAACGCGAACTT ATTTTGCAGAGTTCTCGAAATCACTATGGACTTGAAAGTATTCCCTCAAA TGTATTAGTCAATCAATTTCTTTAAAATAGAAGTAATGTTATTCAAAAAT ATACTTTGTATATCCGTTTACTACACTTTCAAGTCACAAACTTATTGGGA TATCTCGCAAGTCCAAAATTGCATTAGCTTTCAAGAAAGTTTCAATTTTC TTTTAAATACTAAATGTATTGAACAGTTTTACATTAAGCCAATTGTAAAT TGTAAACGGTGCAGCGGCTTAGATGTTGCGAAGAAAATTCGATTTCGAGA GCTATCCGAGTTGTGGGTTATCATTTTTTGTAGTTTCTGTGTTAACTAGA GACGTTAAAAATGTGTGTTGAAAAGTGAAAGGCGAATGCATCTTCGCATC TGCTCTCCCCCAATCGATTATAATTGTAAATGTATGTGAAATGTGTATGG ATATATAAATATCTCACCCTAATTGATCCCTCTACACCCCCACAAAATCT CCCTAGGCCTTTTAGTGGCGCCCATGCACTTGAAACAAAGACACAAAACA AACCAAAAAATAAATGGGATACAAAATTATAAAGGGTCGAGATAGAAAAG TATGCCACCCATATCTTTTGTTGAGCCCATTTTACGCTGTGGTACTTAAT TAATTAACTACACAAGAGCCAGCAGTAATACGAATGCTAAACACACACAA ACAACTATTGCTAGAACATATGATTATTGCCTATTATAACGTTTAATTAC TATGTTTAATCCCTTTGTATGTAAATCAAACGATGCTTATGCATTGCAAA GGGTGCAGAGTCGCATTATCTGCGCCAGTTTTATGCAAATTCAATAAAAT CGAATGATGTCATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
NOF | 4347 | NOF FB 4347bp Derived from X51937 (g8297) (Rel. 44, Last updated, Version 6). | 491..634 | 183..36 | 118 | 55.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17637037..17638841 | 261..2065 | 100 | <- | Minus |
chr3L | 17643587..17643846 | 1..260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32177-RA | 1..804 | 263..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32177-RA | 1..804 | 263..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ndfip-RA | 1..804 | 263..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32177-RA | 1..804 | 263..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ndfip-RA | 1..804 | 263..1066 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32177-RA | 26..2090 | 1..2065 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32177-RA | 26..2090 | 1..2065 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ndfip-RA | 30..2094 | 1..2065 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32177-RA | 26..2090 | 1..2065 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ndfip-RA | 30..2094 | 1..2065 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17647442..17649246 | 261..2065 | 99 | <- | Minus |
3L | 17653992..17654251 | 1..260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17647442..17649246 | 261..2065 | 99 | <- | Minus |
3L | 17653992..17654251 | 1..260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17647442..17649246 | 261..2065 | 99 | <- | Minus |
3L | 17653992..17654251 | 1..260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17640542..17642346 | 261..2065 | 99 | <- | Minus |
arm_3L | 17647092..17647351 | 1..260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17640542..17642346 | 261..2065 | 99 | <- | Minus |
3L | 17647092..17647351 | 1..260 | 100 | Minus |
Translation from 262 to 1065
> SD09769.pep MPHNNQPSPGDDQLGPPKADFSAPPPYEANVGHGQQVALPAQMPPLALAT PDPSQIPIQMQVQLPSQADLMNAQLPPEIHGKLPTYEEVQMEKSLNGELP PAFLTLPSSQQLPPPPNPLLPPNPLRDGAAAVRSAQPALTFIAIDASDPE NSLSTTDNLLGTDIMFITAFIVAFLFNWIGFLMLTCFCHTIAARYGALSG FGLSLAKWTLIVKHSTDLASHENSWLWWLICAFGFLISIRALIQYVSIKR SWRLLSASAQERLLFFY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20060-PA | 266 | GF20060-PA | 1..266 | 1..267 | 1149 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15795-PA | 267 | GG15795-PA | 1..267 | 1..267 | 1378 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15348-PA | 267 | GH15348-PA | 1..267 | 1..267 | 955 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ndfip-PA | 267 | CG32177-PA | 1..267 | 1..267 | 1413 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12951-PA | 263 | GI12951-PA | 1..263 | 1..267 | 946 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25228-PA | 261 | GL25228-PA | 1..261 | 1..267 | 1019 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16734-PA | 261 | GA16734-PA | 1..261 | 1..267 | 1023 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24319-PA | 251 | GM24319-PA | 1..251 | 1..267 | 1258 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12389-PA | 267 | GD12389-PA | 1..267 | 1..267 | 1380 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13095-PA | 268 | GJ13095-PA | 1..268 | 1..267 | 928 | 75.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12334-PA | 279 | GK12334-PA | 19..279 | 8..267 | 1032 | 84.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22132-PA | 267 | GE22132-PA | 1..267 | 1..267 | 1372 | 98.5 | Plus |
Translation from 262 to 1065
> SD09769.hyp MPHNNQPSPGDDQLGPPKADFSAPPPYEANVGHGQQVALPAQMPPLALAT PDPSQIPIQMQVQLPSQADLMNAQLPPEIHGKLPTYEEVQMEKSLNGELP PAFLTLPSSQQLPPPPNPLLPPNPLRDGAAAVRSAQPALTFIAIDASDPE NSLSTTDNLLGTDIMFITAFIVAFLFNWIGFLMLTCFCHTIAARYGALSG FGLSLAKWTLIVKHSTDLASHENSWLWWLICAFGFLISIRALIQYVSIKR SWRLLSASAQERLLFFY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ndfip-PA | 267 | CG32177-PA | 1..267 | 1..267 | 1413 | 100 | Plus |