Clone SD09829 Report

Search the DGRC for SD09829

Clone and Library Details

Library:SD
Tissue Source:Drosophila melanogaster Schneider L2 cell culture
Created by:Ling Hong
Date Registered:1999-02-25
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:98
Well:29
Vector:pOT2
Associated Gene/TranscriptCG32425-RF
Protein status:SD09829.pep: gold
Preliminary Size:2104
Sequenced Size:2130

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18281 2001-01-01 Release 2 assignment
CG5100 2001-01-01 Release 2 assignment
CG17637 2001-01-01 Release 2 assignment
CG15869 2001-01-01 Release 2 assignment
CG5078 2001-01-01 Release 2 assignment
CG32425 2003-04-28 Blastp of sequenced clone
CG32425 2008-04-29 Release 5.5 accounting
CG32425 2008-08-15 Release 5.9 accounting
CG32425 2008-12-18 5.12 accounting

Clone Sequence Records

SD09829.complete Sequence

2130 bp (2130 high quality bases) assembled on 2003-04-28

GenBank Submission: BT009930

> SD09829.complete
ATTTATGGCCGGAAAATCATAGTACGGAAAATTCGATTTCCCAAGTTTTC
TGAGTCTGTGTGTGTGTGTGTTTTTGGTGTGTGTAAAGATTTTCAACTTT
TCAGCTTGGTTAAGCGGTGAAAAAAGAATAAATCAACAACAACACAAGCG
CGCGCCCGCCTCTCTTTTCGCGTTTTTGTGCGTGTGTGCGTGAGAGTGAG
TGTGATAATTATGGCATAAGTGGCATACAAATTATGATAGCAGAATTCCC
ACGGCCGACGACGAATGTGAATTGGGAAAATCGAAAAAGCAGGCAAAGCC
AGGAGGCGGATAAATCGCCGAGCGAGTGCAGCAAATCGATCAGCTGTGAC
GTCGACGGGGGCAGAAAGTTTGGCCAAAAGAAAAGGTCAAACAAGCAGCA
GCAGCAACAACAACAACAACTGCACGCGGAACGGAAAGAGGAGGAGCTCT
GTCACAAGCAAGGGGTAAAGGATAAGAGTAGTAAGAAGAAGGAGAATCTA
GCAGGCGAGGAGGATAAGAAGAAAAAGCAAGAGGAAAGGGAACATAGCAA
GAAGAAGCAGCAGCTTCAGCAGAAGCAAAGGGCAAATAACAAGAAGAAGA
AGCGGCATCAGCCTCCCCGTGTACAGAGGAAAAAAAACCTCGTCTTATTT
TTAGATTATTTACGCCAGTTTGGTGCCGTCGAAAGCGAAATTGTCGCTGT
TGAATCAGCCGGCTGCTGTGACGTCAGAGAAGCAGGCTGCCATCACGCCA
ACGGTAAATACGCCGCCCATAACGGCACTTGGAGCCATTTCGAGCATAAA
ACCGAAATTTATGCTCTATATCGTCACCTGGAGATCGGTGGCCCGCTCGA
ACAAGTGCAACAGCAACAGCAGCTGAGGGTCTGTCCAATCAAGACCCGGC
TGCGCTTCGAGATGCTCTTTGCCGAGCCACCGCCCACCCAGGGCCACGCC
CCCACCGCCCACGGTCACGATCATACGGCCGATGATATGCCAGATGCGCC
ACCTGGTGGCGAGCCGGTGATCCCAATGCTGCAGGATCAGCAAAACAGCG
AACTTATGGCCGGCACCGCCAGCAACGTCGAGCTAATGGAGGCCATGAAG
AAATTGGACGCGGACCTGGTGGCCCTTTTCGCCACTGCTGCCTCCGCCGA
ACCTCTTAAGATTAGGAAACAGCAGGAGGTCCTGTGGCCGGGAGCCGAGC
CGGAGCAAACCGCCCAGGAATCGGAGGATGATGAGCTGGTGATGACGCCG
GAGCTCTTCCGCAGCTGCAACGCCTTGCAGCTGCACTTGGAGGCACTGAC
ATTGCAGCCGGAGGGAACCCAACGCATGGAACTGGTTCAGAACGAAGTGC
GACCCATTTTCACCGTGGAGTGCCAGCTGTCGGGGGACTTGATCCGTAAA
GTGCCGCGCCAACCGATGTTCCACATCATGCAGTTCGAGTCGGAGAAGTT
CCAGAGCCTGACGCAGTGCACCCGTTTCGGGCAGACGGCTCAGCGTCAGG
TCGATATGGAAGATAAGAGCCTGCAGGATCCGGAACAGAGTGCTGGCCAT
GTAGACATCACGGTTTGGTGGCGCGAACCCGGCACCTGTCTCAACGAAAT
GCTCGGCATGGGCCGCCTGGAGCTCAGGGAGCTCTACAGGGCATCCCTGT
TGGAGCAGTGCAAGTGCATTGCCATTCGGCGACGCGACGTCCACCTGGGT
AGCGTGTACTTGAAGATCAGTCTGCTTCAGAATTTGAATGGTAGCCCGGA
GCAGCCGCAGCAACAGCAGCAGCAGCCGGGCCAAAAGAACGAAAGTGGAA
ACAAGGCAGCAGGTGAATATATATGACTAATGTCGTGTGGTCGCCAATCG
CAAGAACCATTGATTCTTGGGCCCCCAAATCGAATACATCTGATACTAGC
TAAACCACACGACTACAGCCACAACAACTACCAATTCTACCACCAAGCAG
AACAACAAATGCTATACAAATACCAAATCTACACGAGCCGCCCACAACCA
CGCCCACGCCTCCTGCACTTACTCTATATGTTATTGATTGCCGTTATCCA
AGTGCTGCCCATCATTCTGTCAATAAATACTTTTCATTTTCAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

SD09829.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:12:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG32425-RF 2278 CG32425-RF 156..2272 1..2119 10405 99.4 Plus
CG32425-RB 1449 CG32425-RB 324..1384 1059..2119 5200 99.3 Plus
CG32425.b 3241 CG32425.b 324..1077 1059..1812 3755 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20486385..20487447 1..1063 5240 99.5 Plus
chr3L 24539361 chr3L 20499019..20500048 1062..2091 5135 99.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:53:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:34:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20497405..20498465 1..1063 5205 99.5 Plus
3L 28110227 3L 20510029..20511086 1062..2119 5200 99.4 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:55:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 20490505..20491565 1..1063 5215 99.5 Plus
3L 28103327 3L 20503129..20504186 1062..2119 5200 99.4 Plus
Blast to na_te.dros performed 2019-03-16 00:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 3216..3265 1934..1983 124 72 Plus
Stalker2 7672 Stalker2 STALKER2 7672bp 645..691 206..160 118 72.3 Minus

SD09829.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:35:28 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20486385..20487446 1..1062 99 -> Plus
chr3L 20499020..20500048 1063..2091 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:46:38 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32425-RF 1..1593 234..1826 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:44:27 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32425-RF 1..1593 234..1826 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:54:14 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32425-RF 1..1593 234..1826 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:35:54 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32425-RF 1..1593 234..1826 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:05:57 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32425-RF 1..1593 234..1826 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:46:34 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32425-RF 1..2089 1..2091 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:44:27 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32425-RF 1..2089 1..2091 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:54:14 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32425-RF 83..2171 1..2091 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:35:54 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32425-RF 1..2089 1..2091 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:05:57 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
CG32425-RF 83..2171 1..2091 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:35:28 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20497405..20498464 1..1062 99 -> Plus
3L 20510030..20511058 1063..2091 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:35:28 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20497405..20498464 1..1062 99 -> Plus
3L 20510030..20511058 1063..2091 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:35:28 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20497405..20498464 1..1062 99 -> Plus
3L 20510030..20511058 1063..2091 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:54:14 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20490505..20491564 1..1062 99 -> Plus
arm_3L 20503130..20504158 1063..2091 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:05:55 Download gff for SD09829.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20490505..20491564 1..1062 99 -> Plus
3L 20503130..20504158 1063..2091 99   Plus

SD09829.pep Sequence

Translation from 233 to 1825

> SD09829.pep
MIAEFPRPTTNVNWENRKSRQSQEADKSPSECSKSISCDVDGGRKFGQKK
RSNKQQQQQQQQLHAERKEEELCHKQGVKDKSSKKKENLAGEEDKKKKQE
EREHSKKKQQLQQKQRANNKKKKRHQPPRVQRKKNLVLFLDYLRQFGAVE
SEIVAVESAGCCDVREAGCHHANGKYAAHNGTWSHFEHKTEIYALYRHLE
IGGPLEQVQQQQQLRVCPIKTRLRFEMLFAEPPPTQGHAPTAHGHDHTAD
DMPDAPPGGEPVIPMLQDQQNSELMAGTASNVELMEAMKKLDADLVALFA
TAASAEPLKIRKQQEVLWPGAEPEQTAQESEDDELVMTPELFRSCNALQL
HLEALTLQPEGTQRMELVQNEVRPIFTVECQLSGDLIRKVPRQPMFHIMQ
FESEKFQSLTQCTRFGQTAQRQVDMEDKSLQDPEQSAGHVDITVWWREPG
TCLNEMLGMGRLELRELYRASLLEQCKCIAIRRRDVHLGSVYLKISLLQN
LNGSPEQPQQQQQQPGQKNESGNKAAGEYI*

SD09829.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:42:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10352-PA 739 GF10352-PA 1..238 285..526 962 79.4 Plus
Dana\GF10350-PA 331 GF10350-PA 137..257 132..234 220 50.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:42:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16125-PA 758 GG16125-PA 1..242 285..526 1180 94.2 Plus
Dere\GG16122-PA 780 GG16122-PA 1..295 1..298 1082 76.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:42:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14555-PA 879 GH14555-PA 78..305 282..497 707 61.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32425-PF 530 CG32425-PF 1..530 1..530 2790 100 Plus
CG32425-PB 246 CG32425-PB 1..246 285..530 1273 100 Plus
CG32425-PA 759 CG32425-PA 1..242 285..526 1251 100 Plus
CG32425-PE 759 CG32425-PE 1..242 285..526 1251 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:42:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13403-PA 967 GI13403-PA 71..415 175..497 804 55.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:43:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12797-PA 577 GL12797-PA 1..210 284..497 747 66.7 Plus
Dper\GL12794-PA 316 GL12794-PA 156..277 132..235 186 46.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:43:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16893-PA 764 GA16893-PA 1..202 285..492 810 74 Plus
Dpse\GA28642-PA 316 GA28642-PA 156..277 132..235 178 46.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:43:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22300-PA 278 GM22300-PA 1..276 1..276 1241 94.9 Plus
Dsec\GM22304-PA 742 GM22304-PA 1..220 285..504 1149 96.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:43:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14897-PA 758 GD14897-PA 1..242 285..526 1262 97.5 Plus
Dsim\GD14893-PA 278 GD14893-PA 1..276 1..276 1242 95.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:43:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11527-PA 780 GJ11527-PA 1..216 285..497 760 69.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:43:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12297-PA 907 GK12297-PA 24..300 273..498 696 54.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:43:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19693-PA 758 GE19693-PA 1..243 285..527 1182 93.8 Plus
Dyak\GE19690-PA 763 GE19690-PA 1..283 1..281 1027 80.6 Plus

SD09829.hyp Sequence

Translation from 233 to 1825

> SD09829.hyp
MIAEFPRPTTNVNWENRKSRQSQEADKSPSECSKSISCDVDGGRKFGQKK
RSNKQQQQQQQQLHAERKEEELCHKQGVKDKSSKKKENLAGEEDKKKKQE
EREHSKKKQQLQQKQRANNKKKKRHQPPRVQRKKNLVLFLDYLRQFGAVE
SEIVAVESAGCCDVREAGCHHANGKYAAHNGTWSHFEHKTEIYALYRHLE
IGGPLEQVQQQQQLRVCPIKTRLRFEMLFAEPPPTQGHAPTAHGHDHTAD
DMPDAPPGGEPVIPMLQDQQNSELMAGTASNVELMEAMKKLDADLVALFA
TAASAEPLKIRKQQEVLWPGAEPEQTAQESEDDELVMTPELFRSCNALQL
HLEALTLQPEGTQRMELVQNEVRPIFTVECQLSGDLIRKVPRQPMFHIMQ
FESEKFQSLTQCTRFGQTAQRQVDMEDKSLQDPEQSAGHVDITVWWREPG
TCLNEMLGMGRLELRELYRASLLEQCKCIAIRRRDVHLGSVYLKISLLQN
LNGSPEQPQQQQQQPGQKNESGNKAAGEYI*

SD09829.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:05:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG32425-PF 530 CG32425-PF 1..530 1..530 2790 100 Plus
CG32425-PB 246 CG32425-PB 1..246 285..530 1273 100 Plus
CG32425-PA 759 CG32425-PA 1..242 285..526 1251 100 Plus
CG32425-PE 759 CG32425-PE 1..242 285..526 1251 100 Plus