BDGP Sequence Production Resources |
Search the DGRC for SD09860
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 98 |
Well: | 60 |
Vector: | pOT2 |
Associated Gene/Transcript | Nat1-RA |
Protein status: | SD09860.pep: gold |
Preliminary Size: | 3152 |
Sequenced Size: | 3715 |
Gene | Date | Evidence |
---|---|---|
CG12202 | 2001-01-01 | Release 2 assignment |
CG12202 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12202 | 2004-05-03 | Blastp of sequenced clone |
Nat1 | 2008-04-29 | Release 5.5 accounting |
Nat1 | 2008-08-15 | Release 5.9 accounting |
Nat1 | 2008-12-18 | 5.12 accounting |
3715 bp (3715 high quality bases) assembled on 2004-05-03
GenBank Submission: BT014631
> SD09860.complete CCAGTGTGGGTGTGTGTGGTCGTCTCACGTCGATTTAGAAATTTGCTCGT GCCCGCAGTTTGCCGTTCGCCGTTTTCGCCTTGTGTGTGTGGTGTGTCTA CTCCGTATAGACTGCCAATCGAGTCCAGCTCCGCTTCCGAGCAGCAGCAG AAGAGGCATCGCAACTCAGCTCAGCTCGCTGATCCACAGATCCCGCAGTC CGGTGCAATTCACGGCCAGGCGAAAACCCAGTCCCAGTCAGCAGCTGAGG AAGAACAAGAACGACCAAGCAGAAGAAGCAGCAGGCCGAAGAGAGGAGCA GCCGCAGCCTTGCAGAGATGCCTTCTAGCGATCCCCTGCCGCCCAAGGAG GGCGCGCTCTTCCGCAAGCTACTTAAATGCTACGAACTGAAGCAGTACAA AAATGGCCTTAAACTGGCCAAGCAGATCCTGTCCAACCCCAAGTACATGG AGCACGGCGAGACGCTGGCCATGAAGGGGCTTACTCTGAACGGACTGGGG CGCCGCGAGGAGGCCTACAAGTATGTGCGTCTGGGTCTGCGAAACGACCT GCGCTCCCACGTTTGCTGGCACGTCTACGGACTGCTCCAGCGCAGCGACA AGAAGTACGATGAGGCCATCAAGTGCTACCGCAACGCGCTCAAGTGGGAG AAGGATAACCTGCAGATCCTGAAGGACCTGTCGCTTCTCCAGATCCAAAT GCGCGACCTCGAGGGCTACAAGGAGACGCGCCACCACCTGTTCACGCTGC GTCCCTCGCAGCACGCCTCCTGGATCGGTTTCGCCATGAGCTACCATCTG CTGGGTGACTACGACATGGCCAACAGCATCCTGGAGACGTTCAGCCAGTC GCAAACGTCGATTGAGGCGCACGATTATCGGCACTCGGAGCTGCTGCTCT ACCAGAACCAGATACTCATCGAGTCGAATCGTCTGCAGCAGGCCGTGGAC CACCTGACCAAATACCAGGGCCAGATCGTCGACAAGCTGGCCGTTCGCGA GACCATGGGTGATCTGTACATCAAGCTGCAGCAGCAGGAGAAGGCAGTGC CCATCTTTGAGTCTCTGATCCGCCGCAATCCGGAGAATGTGCTCTACTAC GAGCAGTACATTGCCGCCCGCCAGGTGACCGACTCAAGCGCCGTGGTGTC GATCTATCGCGTGTTCCAGGAGCAGTATCCGCGCGCCCTGTGCCCTCGCC GCCTGCCTTTGAACATCGCCAACGGCGACGAGTTTCGCGTCGTGACCGAC GAGTACCTGCGCCGCGGTCTGCGTAAGGGCATTCCGCCGCTATTTGTCAA CGTGCGCACTCTGCACCAGATACCGGAGAGGGCGGCCGTTATCGAGGAGC TGGCGCTGCAGTATTTCGAGAACCTTACCCGTTCCGGCCACTTTTCTCGC GAAGATGCCGACGCCGGAATTCCCGTCGAGCCGGCCTCGGCGCTGGTGTG GACGGCACTGTTTCTGGCGCAGCACTACGACTACATGCGCGATACGGACC GCGCTCTGGAGTACATCAATGTGGCTATCGACCATACGCCAACACTCATT GAGCTGCTTATCACCAAGGGTCGCATCTTTAAGCATGCTGGCGATCCCGT GGAGGCGTACGTCTGGCTGGAGGAGGCCCAAAGCATGGACACGGCAGATC GCTACATCAATTCGAAGTGCGCGAAGTACATGCTGCGCGCCAACATGGTG CAGGAGGCAGAGGAGATCTGCGCCAAGTTCACTCGCGAGGGTGTCTCCGC CATGGACAACTTGAACGAGATGCAGTGCATGTGGTTCCAGACGGAGTGTG CCCTGGCCTATCAGCGCATGGGTCGCTGGGGCGAGTCGTTGAAGAAGTGC CACGAGGTGGAGCGCCACTTTGCCGAAATCGTCGAGGACCAGTTCGATTT CCACACCTATTGCATGCGTAAAATGACGCTGCGCGCCTACGTTGGCCTGT TGCGATTGGAGGACGTGCTACGCCAGCATCCATTCTATTTCAAGGCGGCC AAGTGCGCCATCGAGGTGTACATTCGTCTGTACGACAAGCCGCTTAAGTC GGAGACAACCATTGAAGAGATTGACATTGAGAACCTGCCGCCATCAGAAC TGAAGAAGCTGCGCAGCAAACAGCGCAAGGCCAAGAAGAAAGCTGAGCTG GAGAGTGCGCAGGCCGCACAGGCGCAGGTGAAGCGCGAGCAGCACCAGAA ATCGAAACAGCAGGCAAACCAGGAGACCGACCCCGATGCTCCGCAGTTGG ACGAGCTGGTGGCCGAGAAGCTGGAGCGCACGGACGATCCGCTGGACAAG GCCATTGAATTCTTGAAACCGCTGCAGCAGCTGGCTAAGGAGCGCATCGA GACGCATCTGCTGGCCTTCGAGTTGTACTACCGCAAGAACAAACTGCTCC TTATGCTGCAGTGCATCCGGCGCGCTCGCGCCGTCGACGCCTCGCACCCC GTAATCCACAGCTGCATTATTCGCTTCGTTAAATCGTTGACCAGCGCCGC CAAGGAGCAGCCGTTCAATGAGCACGTGCAGCAGGTGCTGGAGAAGGCCA CCAAAGAACTGATAGGCAGCAAGACGCCCCAGCAGCTCAACGATGAGTTT ATTGCCAAACACAACGCTTCCATACTGCATTTATACGAGGGCGCCCGCAG TCTGTACGAACTGGACAATAGTAAAAAAGCTGCCGCCATCAAGCTGGTCA CTAGCTTCAACCTGGCCAAGCTCCGGCTGGAGGAGGCCACCAAAATCTAC ACAGCGTTGCGGGACGGCGATGTGTTTGGCGAGTGCGAGGCAGAGGCCGC TTCCTACCAGCAGGCGTGCCACCAACGCTTCCAGTACGCCCGCATCTTTC GCAATGTCGAGGAGCTGGAGGCTCAACTGCAGGAGAAGGAGGCCGCCAAG CTGCGCGCCGAGGAAGAGCAGCAGCAGCTGATTCACGTTGATTCTAGTGA ACCGGTGTCTGTTTTGGCCACGGCAGCGGCAGCGTCTTAGGACCAAACAA GACTACTAACTAATACCCGGGCCCGAGAAGTTAGTAACAGCAACAACAGA TCTGCGGCCACCACACCAACAAACACAACAAAAGCAACAATAACGAAAAG TGAAGCGAAGAACCTAACTAACAACCAACAATATGAACAGGAATAAGCTT AGCTCTATAAACAACGGCAACCACAATAAAATTCACTATTAACAACAACA AACCAAGTGCTCTGATGAGGAGGACGCCAAGCCGCTCTAGGCATGGCCGA GTTTATCTGATCGGATCGGATCGGATTGGACCGGTACGGATCAGATCTGA GGCGGCGGTTGGCTTGGCGCTGTGCCCTTGTGCGTGGCACCTACCAGTCT GCCACCTGAGAACACATCCCGTCGTCATCCGTCACACAGCATCCTACAAA ATGGTTTCGGCCGAGGACGAGTCGATGAGGAATAGGAATAGGAATCCGGT ACGAAATGGTGCGGAGGTGATATGTGGGATTCGCACGTCGAACGTTCGTC ACCGCGAACCATGTAGTTAACCAAGTTGTTGTATCCACTGTTGTGGGATT TCGAAAACTGAATCAAACGGAACGAACCTTTGTTGACAACACCCGCTGGC TTTCTTAACAACACCTTATTTTTTATTATTTTTAACGAATGCATTGTATG TACATATGAAGTCGTAATTAATTATACGCAAATCAAAACCTTAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19372464..19373425 | 2731..3692 | 4810 | 100 | Plus |
chrX | 22417052 | chrX | 19370380..19371167 | 864..1651 | 3940 | 100 | Plus |
chrX | 22417052 | chrX | 19371733..19372387 | 2079..2733 | 3275 | 100 | Plus |
chrX | 22417052 | chrX | 19369800..19370289 | 375..864 | 2450 | 100 | Plus |
chrX | 22417052 | chrX | 19371233..19371661 | 1651..2079 | 2145 | 100 | Plus |
chrX | 22417052 | chrX | 19369086..19369459 | 1..374 | 1870 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 19483682..19484645 | 2731..3694 | 4790 | 99.8 | Plus |
X | 23542271 | X | 19481598..19482385 | 864..1651 | 3940 | 100 | Plus |
X | 23542271 | X | 19482951..19483605 | 2079..2733 | 3260 | 99.8 | Plus |
X | 23542271 | X | 19481018..19481507 | 375..864 | 2450 | 100 | Plus |
X | 23542271 | X | 19482451..19482879 | 1651..2079 | 2145 | 100 | Plus |
X | 23542271 | X | 19480305..19480678 | 1..374 | 1870 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 19491780..19492743 | 2731..3694 | 4790 | 99.7 | Plus |
X | 23527363 | X | 19489696..19490483 | 864..1651 | 3940 | 100 | Plus |
X | 23527363 | X | 19491049..19491703 | 2079..2733 | 3260 | 99.8 | Plus |
X | 23527363 | X | 19489116..19489605 | 375..864 | 2450 | 100 | Plus |
X | 23527363 | X | 19490549..19490977 | 1651..2079 | 2145 | 100 | Plus |
X | 23527363 | X | 19488403..19488776 | 1..374 | 1870 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19369086..19369459 | 1..374 | 100 | -> | Plus |
chrX | 19369800..19370288 | 375..863 | 100 | -> | Plus |
chrX | 19370380..19371167 | 864..1651 | 100 | -> | Plus |
chrX | 19371234..19371661 | 1652..2079 | 100 | -> | Plus |
chrX | 19371734..19372386 | 2080..2732 | 100 | -> | Plus |
chrX | 19372466..19372768 | 2733..3035 | 100 | == | Plus |
chrX | 19372935..19373425 | 3202..3692 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nat1-RA | 1..2673 | 318..2990 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nat1-RA | 1..2673 | 318..2990 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nat1-RA | 1..2673 | 318..2990 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nat1-RA | 1..2673 | 318..2990 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nat1-RA | 1..2673 | 318..2990 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nat1-RA | 153..3844 | 1..3692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nat1-RA | 153..3844 | 1..3692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nat1-RA | 47..3738 | 1..3692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nat1-RA | 153..3844 | 1..3692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Nat1-RA | 47..3738 | 1..3692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19480305..19480678 | 1..374 | 100 | -> | Plus |
X | 19481018..19481506 | 375..863 | 100 | -> | Plus |
X | 19481598..19482385 | 864..1651 | 100 | -> | Plus |
X | 19482452..19482879 | 1652..2079 | 100 | -> | Plus |
X | 19482952..19483604 | 2080..2732 | 99 | -> | Plus |
X | 19483684..19484643 | 2733..3692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19480305..19480678 | 1..374 | 100 | -> | Plus |
X | 19481018..19481506 | 375..863 | 100 | -> | Plus |
X | 19481598..19482385 | 864..1651 | 100 | -> | Plus |
X | 19482452..19482879 | 1652..2079 | 100 | -> | Plus |
X | 19482952..19483604 | 2080..2732 | 99 | -> | Plus |
X | 19483684..19484643 | 2733..3692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19480305..19480678 | 1..374 | 100 | -> | Plus |
X | 19481018..19481506 | 375..863 | 100 | -> | Plus |
X | 19481598..19482385 | 864..1651 | 100 | -> | Plus |
X | 19482452..19482879 | 1652..2079 | 100 | -> | Plus |
X | 19482952..19483604 | 2080..2732 | 99 | -> | Plus |
X | 19483684..19484643 | 2733..3692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19374338..19374711 | 1..374 | 100 | -> | Plus |
arm_X | 19375051..19375539 | 375..863 | 100 | -> | Plus |
arm_X | 19375631..19376418 | 864..1651 | 100 | -> | Plus |
arm_X | 19376485..19376912 | 1652..2079 | 100 | -> | Plus |
arm_X | 19376985..19377637 | 2080..2732 | 99 | -> | Plus |
arm_X | 19377717..19378676 | 2733..3692 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19488403..19488776 | 1..374 | 100 | -> | Plus |
X | 19489116..19489604 | 375..863 | 100 | -> | Plus |
X | 19489696..19490483 | 864..1651 | 100 | -> | Plus |
X | 19490550..19490977 | 1652..2079 | 100 | -> | Plus |
X | 19491050..19491702 | 2080..2732 | 99 | -> | Plus |
X | 19491782..19492741 | 2733..3692 | 99 | Plus |
Translation from 317 to 2989
> SD09860.pep MPSSDPLPPKEGALFRKLLKCYELKQYKNGLKLAKQILSNPKYMEHGETL AMKGLTLNGLGRREEAYKYVRLGLRNDLRSHVCWHVYGLLQRSDKKYDEA IKCYRNALKWEKDNLQILKDLSLLQIQMRDLEGYKETRHHLFTLRPSQHA SWIGFAMSYHLLGDYDMANSILETFSQSQTSIEAHDYRHSELLLYQNQIL IESNRLQQAVDHLTKYQGQIVDKLAVRETMGDLYIKLQQQEKAVPIFESL IRRNPENVLYYEQYIAARQVTDSSAVVSIYRVFQEQYPRALCPRRLPLNI ANGDEFRVVTDEYLRRGLRKGIPPLFVNVRTLHQIPERAAVIEELALQYF ENLTRSGHFSREDADAGIPVEPASALVWTALFLAQHYDYMRDTDRALEYI NVAIDHTPTLIELLITKGRIFKHAGDPVEAYVWLEEAQSMDTADRYINSK CAKYMLRANMVQEAEEICAKFTREGVSAMDNLNEMQCMWFQTECALAYQR MGRWGESLKKCHEVERHFAEIVEDQFDFHTYCMRKMTLRAYVGLLRLEDV LRQHPFYFKAAKCAIEVYIRLYDKPLKSETTIEEIDIENLPPSELKKLRS KQRKAKKKAELESAQAAQAQVKREQHQKSKQQANQETDPDAPQLDELVAE KLERTDDPLDKAIEFLKPLQQLAKERIETHLLAFELYYRKNKLLLMLQCI RRARAVDASHPVIHSCIIRFVKSLTSAAKEQPFNEHVQQVLEKATKELIG SKTPQQLNDEFIAKHNASILHLYEGARSLYELDNSKKAAAIKLVTSFNLA KLRLEEATKIYTALRDGDVFGECEAEAASYQQACHQRFQYARIFRNVEEL EAQLQEKEAAKLRAEEEQQQLIHVDSSEPVSVLATAAAAS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20491-PA | 892 | GF20491-PA | 1..892 | 1..890 | 4441 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19226-PA | 890 | GG19226-PA | 1..890 | 1..890 | 4646 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17872-PA | 893 | GH17872-PA | 1..893 | 1..886 | 4142 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Naa15-16-PB | 890 | CG12202-PB | 1..890 | 1..890 | 4582 | 100 | Plus |
Naa15-16-PA | 890 | CG12202-PA | 1..890 | 1..890 | 4582 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16441-PA | 893 | GI16441-PA | 1..888 | 1..888 | 4245 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14783-PA | 890 | GL14783-PA | 1..890 | 1..890 | 4297 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11473-PA | 890 | GA11473-PA | 1..890 | 1..890 | 4298 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22959-PA | 789 | GM22959-PA | 198..789 | 284..890 | 3008 | 94.4 | Plus |
Dsec\GM22959-PA | 789 | GM22959-PA | 1..180 | 1..180 | 995 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15841-PA | 900 | GJ15841-PA | 1..879 | 1..878 | 4276 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17986-PA | 907 | GK17986-PA | 1..907 | 1..887 | 4208 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15844-PA | 890 | GE15844-PA | 1..890 | 1..890 | 4688 | 98 | Plus |
Translation from 317 to 2989
> SD09860.hyp MPSSDPLPPKEGALFRKLLKCYELKQYKNGLKLAKQILSNPKYMEHGETL AMKGLTLNGLGRREEAYKYVRLGLRNDLRSHVCWHVYGLLQRSDKKYDEA IKCYRNALKWEKDNLQILKDLSLLQIQMRDLEGYKETRHHLFTLRPSQHA SWIGFAMSYHLLGDYDMANSILETFSQSQTSIEAHDYRHSELLLYQNQIL IESNRLQQAVDHLTKYQGQIVDKLAVRETMGDLYIKLQQQEKAVPIFESL IRRNPENVLYYEQYIAARQVTDSSAVVSIYRVFQEQYPRALCPRRLPLNI ANGDEFRVVTDEYLRRGLRKGIPPLFVNVRTLHQIPERAAVIEELALQYF ENLTRSGHFSREDADAGIPVEPASALVWTALFLAQHYDYMRDTDRALEYI NVAIDHTPTLIELLITKGRIFKHAGDPVEAYVWLEEAQSMDTADRYINSK CAKYMLRANMVQEAEEICAKFTREGVSAMDNLNEMQCMWFQTECALAYQR MGRWGESLKKCHEVERHFAEIVEDQFDFHTYCMRKMTLRAYVGLLRLEDV LRQHPFYFKAAKCAIEVYIRLYDKPLKSETTIEEIDIENLPPSELKKLRS KQRKAKKKAELESAQAAQAQVKREQHQKSKQQANQETDPDAPQLDELVAE KLERTDDPLDKAIEFLKPLQQLAKERIETHLLAFELYYRKNKLLLMLQCI RRARAVDASHPVIHSCIIRFVKSLTSAAKEQPFNEHVQQVLEKATKELIG SKTPQQLNDEFIAKHNASILHLYEGARSLYELDNSKKAAAIKLVTSFNLA KLRLEEATKIYTALRDGDVFGECEAEAASYQQACHQRFQYARIFRNVEEL EAQLQEKEAAKLRAEEEQQQLIHVDSSEPVSVLATAAAAS*