BDGP Sequence Production Resources |
Search the DGRC for SD10002
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 100 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5902-RA |
Protein status: | SD10002.pep: gold |
Preliminary Size: | 2069 |
Sequenced Size: | 1950 |
Gene | Date | Evidence |
---|---|---|
CG5902 | 2001-01-01 | Release 2 assignment |
CG5902 | 2002-05-20 | Blastp of sequenced clone |
CG5902 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5902 | 2008-04-29 | Release 5.5 accounting |
CG5902 | 2008-08-15 | Release 5.9 accounting |
CG5902 | 2008-12-18 | 5.12 accounting |
1950 bp (1950 high quality bases) assembled on 2002-05-20
GenBank Submission: AY118445
> SD10002.complete TGAACTCGTAAAAAAGTGTAAAATTTGTTTACATTGAAAAAAGGTAAAAA ATTGTTCTTGAGGGCTACCTACGGTGCTCCCTGGCTCCTAGATGGGTCAG CCAAGACAAAGGGCCGTGTGCATGTGTGGCGCGTAGCCCTTTATAAGTGC GGGGGGTGGGGGGAACAGCCAGGGCGAACAAAGAGCAATTAATGCAATAG GAGGAGGGGGGCTTTCTCCTCCGATTTTCCCCACTTCCCCGAATTTTCCA ATAGAGGCTGTTGTGAAACCTAAGACGCATCAGCGGATCAGCGGACGCAA TTCAATGAGGTGCTTATGAGCTAACTAGCAGCAGGACGGCAGCCAAGGAA CACGGGGACGAGGTCTGGATCAGTTAGCAGGGAGCCAGGAATCACAGGCT AGAGGTCAGCGCAAACTGGAGGGCAGCAGGTGACCTAGTTTACGCAGTAG CAGACGATTAGAGGACTGGCGGCAGCGTTTCTGTGGCAACTCCTACTGGG GCTGTTCTGTTGTGTTAATTGAACTTAGAGCATCAACGTGCACTGCCATT AGTTGTAACCTCAATATACCTACCTAACGTAATTAGTGAACCAGTTCTGA CACAGAACAGCATGTCCAACTCCCACTACAACAACTACCAGCAGCAGCAG CCGCACTCCAGCAACGGAGATCCGGAATACCAGCACCAGCAGATGGTGCA CCAGCCGCAACGGTTCTCCAACGGCCATGGCATGAAGACCGTCGCTGTGC CAGACATGTGCCTGTTCTGCTTCGAGGTGCTTGACTGTGAGCTGAACAAC GTCGATGGTCCATCGGTGCCGGTGTTTAGCAACGACGCCTACCCACTCTT TGTCACCTGGAAGATTGGGCGTGACAAGAGGCTGCGTGGCTGCATTGGTA CTTTTAGTGCAATGGAACTGCACCATGGTCTTCGGGAGTACGCCTTGACC AGCGCCTTTAAGGACTCTAGATTTGCACCTATCTCTAGAGATGAGTTGCC ACGGCTAACTGTCTCGGTCTCGATCCTGCAGAACTTCGAGGAGGCTCAGG GCCACCTGGACTGGCAACTGGGCGTCCATGGCATCCGCATCGAGTTCCTC ACAGAACGCGGCTGCAAGCGCACAGCCACCTATTTGCCGCAGGTGGCCAC CGAACAGGGCTGGGACCAGCTGCAGACCATTGACTCACTCCTACGGAAGG GCGGCTATCGGGCTGCCATAACTCCGGAGACGAGGAAGTCCATAAAGCTA ACGCGCTACCGTTCGCAGGAGATCCAGATGCACTACAAGGAGTACCGCGA GTACCAGGAGCGTCGCGCCCAGTTCGGCAAGGTGCAGTGCTAACAATTGG ACAGGACGGCGGCGAGGCGATGATCCTGGCTTAGGGCAGGCCTGATGGCC GTCGTCCTCCTGCTGCTGCTAGCTTTTGAGTTTGGCCCAGCTTGGCGGCC GCTCGCTTAATTCAAGTTATGAGTTATTATATCTCCAGCATCAATTTTAA GCCCTCAAAAATTCTCCAAAAACGCGCGTGAGATGAGCGTCTTTTACTAA ATATACCATTTAATGCTTCAAATACTTAAGCGGCAGATCCGTAAGCAATT TCGAATGAGAAACAGAATGAAAACAGAAAAGATTGTAAGCGCTATGTTGA AACCCATTGCATTCGGATACACCGATCTATGTTGTAGCCGCAGCCTTGCT GGTTTCTTTTTAAATCAAACACACACAAACTAAAACTAAACAAGCGTATA TATGGGGATATATATTACCGAATCAATACAATACAAAATGCAGATATATA ATTCACGTAAAATGTTCAGCAATTATATTATAGATTTAACAACTAAACCA ATTACATTACTAATTCTAATTCTATGCGCATTAAATAAAGGTCGACCCCT TCTGAGTCGCACAAGACAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 19810643..19812113 | 452..1922 | 7355 | 100 | Plus |
chr3R | 27901430 | chr3R | 19810048..19810321 | 1..274 | 1370 | 100 | Plus |
chr3R | 27901430 | chr3R | 19810405..19810585 | 273..453 | 905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 23987268..23988742 | 452..1926 | 7345 | 99.9 | Plus |
3R | 32079331 | 3R | 23986673..23986946 | 1..274 | 1355 | 99.6 | Plus |
3R | 32079331 | 3R | 23987030..23987210 | 273..453 | 905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 23728099..23729573 | 452..1926 | 7345 | 99.8 | Plus |
3R | 31820162 | 3R | 23727504..23727777 | 1..274 | 1355 | 99.6 | Plus |
3R | 31820162 | 3R | 23727861..23728041 | 273..453 | 905 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6712..6827 | 598..711 | 169 | 64.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6808..6925 | 602..716 | 166 | 65.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6674..6833 | 579..740 | 164 | 59.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2309..2421 | 602..711 | 160 | 64.9 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1028..1161 | 604..735 | 159 | 62.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6688..6799 | 604..713 | 141 | 62.3 | Plus |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 693..793 | 1774..1870 | 134 | 67.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1024..1157 | 581..711 | 130 | 59.3 | Plus |
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 307..429 | 1779..1898 | 121 | 58.9 | Plus |
McClintock | 6450 | McClintock McCLINTOCK 6450bp | 1112..1235 | 1709..1851 | 113 | 61.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19810048..19810321 | 1..274 | 100 | -> | Plus |
chr3R | 19810407..19810585 | 275..453 | 100 | -> | Plus |
chr3R | 19810645..19812113 | 454..1922 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5902-RA | 1..732 | 612..1343 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5902-RC | 1..732 | 612..1343 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5902-RB | 1..732 | 612..1343 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5902-RA | 1..732 | 612..1343 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5902-RB | 1..732 | 612..1343 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5902-RA | 1..1925 | 1..1922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5902-RC | 1..1922 | 1..1922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5902-RC | 32..1953 | 1..1922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5902-RA | 1..1925 | 1..1922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5902-RC | 32..1953 | 1..1922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23986673..23986946 | 1..274 | 99 | -> | Plus |
3R | 23987032..23987210 | 275..453 | 100 | -> | Plus |
3R | 23987270..23988738 | 454..1922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23986673..23986946 | 1..274 | 99 | -> | Plus |
3R | 23987032..23987210 | 275..453 | 100 | -> | Plus |
3R | 23987270..23988738 | 454..1922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23986673..23986946 | 1..274 | 99 | -> | Plus |
3R | 23987032..23987210 | 275..453 | 100 | -> | Plus |
3R | 23987270..23988738 | 454..1922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19812754..19812932 | 275..453 | 100 | -> | Plus |
arm_3R | 19812395..19812668 | 1..274 | 99 | -> | Plus |
arm_3R | 19812992..19814460 | 454..1922 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23728101..23729569 | 454..1922 | 99 | Plus | |
3R | 23727504..23727777 | 1..274 | 99 | -> | Plus |
3R | 23727863..23728041 | 275..453 | 100 | -> | Plus |
Translation from 611 to 1342
> SD10002.pep MSNSHYNNYQQQQPHSSNGDPEYQHQQMVHQPQRFSNGHGMKTVAVPDMC LFCFEVLDCELNNVDGPSVPVFSNDAYPLFVTWKIGRDKRLRGCIGTFSA MELHHGLREYALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHLD WQLGVHGIRIEFLTERGCKRTATYLPQVATEQGWDQLQTIDSLLRKGGYR AAITPETRKSIKLTRYRSQEIQMHYKEYREYQERRAQFGKVQC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17030-PA | 248 | GF17030-PA | 1..248 | 1..243 | 1192 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11242-PA | 243 | GG11242-PA | 1..243 | 1..243 | 1324 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12196-PA | 265 | GH12196-PA | 38..265 | 22..243 | 1045 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5902-PC | 243 | CG5902-PC | 1..243 | 1..243 | 1308 | 100 | Plus |
CG5902-PA | 243 | CG5902-PA | 1..243 | 1..243 | 1308 | 100 | Plus |
CG5902-PB | 243 | CG5902-PB | 1..243 | 1..243 | 1308 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24141-PA | 261 | GI24141-PA | 22..261 | 13..243 | 1067 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23386-PA | 244 | GL23386-PA | 1..244 | 1..243 | 1096 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19214-PA | 248 | GA19214-PA | 1..248 | 1..243 | 1197 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26545-PA | 72 | GM26545-PA | 1..67 | 1..67 | 369 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21051-PA | 243 | GD21051-PA | 1..243 | 1..243 | 1324 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24654-PA | 263 | GJ24654-PA | 29..263 | 18..243 | 1059 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11489-PA | 249 | GK11489-PA | 1..249 | 1..243 | 1104 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23435-PA | 243 | GE23435-PA | 1..243 | 1..243 | 1316 | 99.2 | Plus |
Translation from 611 to 1342
> SD10002.hyp MSNSHYNNYQQQQPHSSNGDPEYQHQQMVHQPQRFSNGHGMKTVAVPDMC LFCFEVLDCELNNVDGPSVPVFSNDAYPLFVTWKIGRDKRLRGCIGTFSA MELHHGLREYALTSAFKDSRFAPISRDELPRLTVSVSILQNFEEAQGHLD WQLGVHGIRIEFLTERGCKRTATYLPQVATEQGWDQLQTIDSLLRKGGYR AAITPETRKSIKLTRYRSQEIQMHYKEYREYQERRAQFGKVQC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5902-PC | 243 | CG5902-PC | 1..243 | 1..243 | 1308 | 100 | Plus |
CG5902-PA | 243 | CG5902-PA | 1..243 | 1..243 | 1308 | 100 | Plus |
CG5902-PB | 243 | CG5902-PB | 1..243 | 1..243 | 1308 | 100 | Plus |