BDGP Sequence Production Resources |
Search the DGRC for SD10272
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 102 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | Msp300-RF |
Protein status: | SD10272.pep: gold |
Preliminary Size: | 2651 |
Sequenced Size: | 2628 |
Gene | Date | Evidence |
---|---|---|
CG18251 | 2001-01-01 | Release 2 assignment |
CG18252 | 2001-01-01 | Release 2 assignment |
CG33549 | 2001-11-09 | Blastp of sequenced clone |
Msp-300 | 2008-04-29 | Release 5.5 accounting |
Msp-300 | 2008-08-15 | Release 5.9 accounting |
Msp-300 | 2008-12-18 | 5.12 accounting |
2628 bp (2628 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069852
> SD10272.complete CAGCGTATTTTAGACTCGTATTCGCGATTCGTACCATACATATATGTGTA TAGAAAGAGAGCAGAAGAAAGAAAGAGGAGAATCGCTACATTTGTTAAAT TTGAATTACCCGTTTCGTTATAAAAAATTCGCCATGTGTCTTCGGCAAGG CGCAAATTGAAATTGAGCAAAAGTAAAAATACAACAAAATCGCCAACCAG ATAGACATCGATATCGAAAAGCCAACGGCTAACGTCATCAGCCATTTAAA ATCTATAAAAGACCAATAAGAAACCAAACAAAATAAAATAAAGGCCACAA AAGGAGGCTACACTCGAGAGCCAAAACAGCGACTTAACGCTAGTCAACCA GCAGGCCCAATCGTTGATCCGCCAGGCGGACGCTCGCAATCGCCAGCTGA TCGAGCAGGATAACGCCGGACTGAATAGATCTTGGCAGGATCTGGTGCGC AGCCTGGAACAGCGACGCGACAACCTGCAACAGTTGGCCGAACATTGGGA CGGCTTCGAGAACAGCCTGCACGCCTGGGAAAAGGCACTTGGTCGACTGG AGGACAAGTTCCGCAATGTCGATCCGACTGTAAGATCCCGACGTCACTTG GAAGATACGAAGAATGCCATTCAGGAACTGCGTGAAGAATCAAATCAACT TAAATCATCACATAAAGAAATCGAGGCGCTCTCTAAATCCATCCTCACAT TCCTTGGGGAAGTACACAAACCCTCGGCGGAGGCCATACAGGCCAAAGTG GATAAGTTAGTTGAACAGCAGGCCAAATTGAACGACACTCTGCGCGATAA GGAGCAACAGGTTAGCAAGGATCTCGAGGAGATCGAGCAAGTCTTCCGTC GCATCTCGCAGCTGCAGGACAAGCTAAACGCGCTTCACGAGCAACTACAA TCGGTTCACGTCTACGACGAGCACATAGCCCAAACGGAACAGCTCCTCAT CACATTGAACAGCCAGGTGCAGCAGGCCGCCGAGGAGAGCAAATTACTGG TGGCCCAGACAACGGCCCACTACCAGGCCAAACAGAATCAGCTGCCCAGC GATATTGCCCAGGAGTTTACGGCTCTTGAGCTACTTGCCGAACGCGTCCA AGTGACCATGGAGACCAAAGAGAAGGATTTCAAGCGGGCCAAGACCGTGC GCACCGAATATGTGGACGGTGTGGACGAGGTGCAGCGTTGGCTGCTCCAG GCAGAGGTGCAGGTGCAGGAGAGAAGCCTCACACCCACACAGATGAAGGA GCTGCTGCAGCGCATTAACCACGAGATCACCGCCATCTACGAACGCTTCA CCCTGGTCAAGACCAACGGTCAGCTGATCATCGAGAACTGTCGCAACAGC GAGGAGAAGACGCTGGTGCAGACGACCATCGATCAGTTGGCCGCATCGCT GGCCCAGGTACGCGGTTGGCTGGATGAGAAGAAGCAGGCGGTGGGCGATA GTCTGGACGCGTGGACGAGGTTCATGAACCTCTACCAGATCGTGATGTCG TGGGCATCCGAGAAGCGCAACTTCATTGACCAGACCATCGAGCTGCGCAC CCTGCCCGAGGCACGCAACAAATTGAACGACTATGTGACGTCTGTGAAGA GTATTAAACCGATTGTGAAGCATCTGAGCGAAATGGACAAGGAACTGGAG CACATTGGCCAAGTGACGACTGTGGGCGATCTCAAGGACAAACTGCAGGA GGCCGAGGATGCGAAGATATCCGTGGAAGCGGTGCTGCTAGAGAGGAACT CCCTGCTGCAAGAGGCCTGCGAGGAATGGGACCAATGTGAACGCAAGATT AAGGATATACGCTCCTGGCACGAAAAGACGAAGCAGGGACTGGACTCCTC GCAGCAGCAGAAGAAACCGCTGCGCGATCAGCTCGGTTTCTGTGAGAAGA CCCTGGCCGATATCAATGTGCAGAAAACGAAACTGAGACTGTCCATCGAA AAACTGGAGGTTCATTTCCGCAATGGCATGGGCGGTGATCCGCGCCTGAG CGAGAACGTCGATGATCTGGTGCGCGTGCTCGACGGCCTCGGCGAATTGG TCAAGGCCAAGTCGCAGAGCCTCGAGCAGACGCTGGCCCAGATCGACGTT TACCAACAGCAGATGCAGTCCCTGCGCCAGCGTATCATCCAGGAGGAGCA ACAGCTCCGCCTGGTGATGGCGCCCACGTACTTGCCGCACGATCGCGAGC GCGCATTAGCCGAGCAACAGGCATGCCGGGAACGTGTCAAAAATCTGCAT TCGAAAATAACTGCACGTAATGAGCGCATCAAGTTGTTAATACATCGCGG CACGCCGGACGATGCCAAGCTAGAGATTTAGGATGCCACAACCTTAACCA TAAGATAAAGCCAATCTAGGACTAGATCAAAGCCAAAGCAGCCACCCCGG CGTCTTCCGTTTGCCCCTGCCACCGATTTCCTTCTCCCAGGAACGGTGGC TACGGTACAACTGTCAACTGCCGTCATTACTCTAATCAATGAAACATGAC CCGTGTTTTAGAATTTACTATTATCTATATATATATATATATATATATAT ACATACATATATACTATTTTACAGAATAAATTAAATTACCGAATTATATT TATAAAACGCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Msp-300-RF | 2612 | Msp-300-RF | 1..2612 | 1..2612 | 13060 | 100 | Plus |
Msp-300-RB | 25608 | Msp-300-RB | 23314..25608 | 317..2611 | 11475 | 100 | Plus |
Msp-300-RD | 37560 | Msp-300-RD | 23314..25218 | 317..2221 | 9525 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5153348..5154317 | 777..1746 | 4850 | 100 | Plus |
chr2L | 23010047 | chr2L | 5156964..5157363 | 2211..2610 | 1970 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 5145486..5145803 | 1..318 | 1590 | 100 | Plus |
chr2L | 23010047 | chr2L | 5146091..5146399 | 317..625 | 1545 | 100 | Plus |
chr2L | 23010047 | chr2L | 5154687..5154950 | 1958..2221 | 1320 | 100 | Plus |
chr2L | 23010047 | chr2L | 5154421..5154636 | 1746..1961 | 1080 | 100 | Plus |
chr2L | 23010047 | chr2L | 5147829..5147982 | 623..776 | 770 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5154248..5155217 | 777..1746 | 4850 | 100 | Plus |
2L | 23513712 | 2L | 5157864..5158265 | 2211..2612 | 1980 | 99.5 | Plus |
2L | 23513712 | 2L | 5146386..5146703 | 1..318 | 1590 | 100 | Plus |
2L | 23513712 | 2L | 5146991..5147299 | 317..625 | 1545 | 100 | Plus |
2L | 23513712 | 2L | 5155587..5155850 | 1958..2221 | 1320 | 100 | Plus |
2L | 23513712 | 2L | 5155321..5155536 | 1746..1961 | 1080 | 100 | Plus |
2L | 23513712 | 2L | 5148729..5148882 | 623..776 | 770 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5154248..5155217 | 777..1746 | 4850 | 100 | Plus |
2L | 23513712 | 2L | 5157864..5158265 | 2211..2612 | 1980 | 99.5 | Plus |
2L | 23513712 | 2L | 5146386..5146703 | 1..318 | 1590 | 100 | Plus |
2L | 23513712 | 2L | 5146991..5147299 | 317..625 | 1545 | 100 | Plus |
2L | 23513712 | 2L | 5155587..5155850 | 1958..2221 | 1320 | 100 | Plus |
2L | 23513712 | 2L | 5155321..5155536 | 1746..1961 | 1080 | 100 | Plus |
2L | 23513712 | 2L | 5148729..5148882 | 623..776 | 770 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\BuT4 | 1447 | Dbuz\BuT4 BUT4 1447bp | 1193..1235 | 73..32 | 122 | 79.1 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5145486..5145802 | 1..317 | 100 | -> | Plus |
chr2L | 5146093..5146398 | 318..624 | 99 | -> | Plus |
chr2L | 5147831..5147982 | 625..776 | 100 | -> | Plus |
chr2L | 5153348..5154317 | 777..1746 | 100 | -> | Plus |
chr2L | 5154422..5154634 | 1747..1959 | 100 | -> | Plus |
chr2L | 5154689..5154949 | 1960..2220 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msp-300-RB | 23133..25149 | 314..2331 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msp-300-RB | 23133..25149 | 314..2331 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msp-300-RB | 23133..25149 | 314..2331 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msp-300-RB | 23133..25149 | 314..2331 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msp300-RB | 23133..25149 | 314..2331 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msp-300-RF | 1..2610 | 1..2610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msp-300-RF | 1..2610 | 1..2610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msp-300-RF | 1..2610 | 1..2610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msp-300-RB | 23135..25428 | 317..2610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Msp300-RF | 1..2610 | 1..2610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5146386..5146703 | 1..318 | 100 | -> | Plus |
2L | 5146993..5147298 | 319..624 | 100 | -> | Plus |
2L | 5148731..5148882 | 625..776 | 100 | -> | Plus |
2L | 5154248..5155217 | 777..1746 | 100 | -> | Plus |
2L | 5155322..5155534 | 1747..1959 | 100 | -> | Plus |
2L | 5155589..5155849 | 1960..2220 | 100 | -> | Plus |
2L | 5157874..5158263 | 2221..2610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5146386..5146703 | 1..318 | 100 | -> | Plus |
2L | 5146993..5147298 | 319..624 | 100 | -> | Plus |
2L | 5148731..5148882 | 625..776 | 100 | -> | Plus |
2L | 5154248..5155217 | 777..1746 | 100 | -> | Plus |
2L | 5155322..5155534 | 1747..1959 | 100 | -> | Plus |
2L | 5155589..5155849 | 1960..2220 | 100 | -> | Plus |
2L | 5157874..5158263 | 2221..2610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5146386..5146703 | 1..318 | 100 | -> | Plus |
2L | 5146993..5147298 | 319..624 | 100 | -> | Plus |
2L | 5148731..5148882 | 625..776 | 100 | -> | Plus |
2L | 5154248..5155217 | 777..1746 | 100 | -> | Plus |
2L | 5155322..5155534 | 1747..1959 | 100 | -> | Plus |
2L | 5155589..5155849 | 1960..2220 | 100 | -> | Plus |
2L | 5157874..5158263 | 2221..2610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5155589..5155849 | 1960..2220 | 100 | -> | Plus |
arm_2L | 5155322..5155534 | 1747..1959 | 100 | -> | Plus |
arm_2L | 5146386..5146703 | 1..318 | 100 | -> | Plus |
arm_2L | 5146993..5147298 | 319..624 | 100 | -> | Plus |
arm_2L | 5148731..5148882 | 625..776 | 100 | -> | Plus |
arm_2L | 5154248..5155217 | 777..1746 | 100 | -> | Plus |
arm_2L | 5157874..5158263 | 2221..2610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5146386..5146703 | 1..318 | 100 | -> | Plus |
2L | 5146993..5147298 | 319..624 | 100 | -> | Plus |
2L | 5148731..5148882 | 625..776 | 100 | -> | Plus |
2L | 5154248..5155217 | 777..1746 | 100 | -> | Plus |
2L | 5155322..5155534 | 1747..1959 | 100 | -> | Plus |
2L | 5155589..5155849 | 1960..2220 | 100 | -> | Plus |
2L | 5157874..5158263 | 2221..2610 | 100 | Plus |
Translation from 1107 to 2330
> SD10272.hyp METKEKDFKRAKTVRTEYVDGVDEVQRWLLQAEVQVQERSLTPTQMKELL QRINHEITAIYERFTLVKTNGQLIIENCRNSEEKTLVQTTIDQLAASLAQ VRGWLDEKKQAVGDSLDAWTRFMNLYQIVMSWASEKRNFIDQTIELRTLP EARNKLNDYVTSVKSIKPIVKHLSEMDKELEHIGQVTTVGDLKDKLQEAE DAKISVEAVLLERNSLLQEACEEWDQCERKIKDIRSWHEKTKQGLDSSQQ QKKPLRDQLGFCEKTLADINVQKTKLRLSIEKLEVHFRNGMGGDPRLSEN VDDLVRVLDGLGELVKAKSQSLEQTLAQIDVYQQQMQSLRQRIIQEEQQL RLVMAPTYLPHDRERALAEQQACRERVKNLHSKITARNERIKLLIHRGTP DDAKLEI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Msp300-PF | 407 | CG42768-PF | 1..407 | 1..407 | 2062 | 100 | Plus |
Msp300-PB | 8382 | CG42768-PB | 7976..8382 | 1..407 | 2062 | 100 | Plus |
Msp300-PM | 6685 | CG42768-PM | 1..380 | 1..380 | 1894 | 98.4 | Plus |
Msp300-PE | 9606 | CG42768-PE | 1..380 | 1..380 | 1894 | 98.4 | Plus |
Msp300-PG | 13540 | CG42768-PG | 1..380 | 1..380 | 1894 | 98.4 | Plus |
Translation from 1107 to 2330
> SD10272.pep METKEKDFKRAKTVRTEYVDGVDEVQRWLLQAEVQVQERSLTPTQMKELL QRINHEITAIYERFTLVKTNGQLIIENCRNSEEKTLVQTTIDQLAASLAQ VRGWLDEKKQAVGDSLDAWTRFMNLYQIVMSWASEKRNFIDQTIELRTLP EARNKLNDYVTSVKSIKPIVKHLSEMDKELEHIGQVTTVGDLKDKLQEAE DAKISVEAVLLERNSLLQEACEEWDQCERKIKDIRSWHEKTKQGLDSSQQ QKKPLRDQLGFCEKTLADINVQKTKLRLSIEKLEVHFRNGMGGDPRLSEN VDDLVRVLDGLGELVKAKSQSLEQTLAQIDVYQQQMQSLRQRIIQEEQQL RLVMAPTYLPHDRERALAEQQACRERVKNLHSKITARNERIKLLIHRGTP DDAKLEI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14378-PA | 8003 | GF14378-PA | 7597..8003 | 1..407 | 2104 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25055-PA | 8391 | GG25055-PA | 7985..8391 | 1..407 | 2119 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10367-PA | 8390 | GH10367-PA | 7984..8390 | 1..407 | 2007 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Msp300-PF | 407 | CG42768-PF | 1..407 | 1..407 | 2062 | 100 | Plus |
Msp300-PB | 8382 | CG42768-PB | 7976..8382 | 1..407 | 2062 | 100 | Plus |
Msp300-PG | 13540 | CG42768-PG | 1..380 | 1..380 | 1894 | 98.4 | Plus |
Msp300-PE | 9606 | CG42768-PE | 1..380 | 1..380 | 1894 | 98.4 | Plus |
Msp300-PM | 6685 | CG42768-PM | 1..380 | 1..380 | 1894 | 98.4 | Plus |
Msp300-PL | 12308 | CG42768-PL | 7976..8369 | 1..393 | 1882 | 95.2 | Plus |
Msp300-PI | 11999 | CG42768-PI | 7617..7987 | 1..371 | 1878 | 100 | Plus |
Msp300-PH | 11986 | CG42768-PH | 7617..7987 | 1..371 | 1878 | 100 | Plus |
Msp300-PD | 12345 | CG42768-PD | 7976..8346 | 1..371 | 1878 | 100 | Plus |
Msp300-PK | 11917 | CG42768-PK | 7548..7918 | 1..371 | 1878 | 100 | Plus |
Msp300-PJ | 7962 | CG42768-PJ | 3580..3950 | 1..371 | 1878 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21368-PA | 681 | GI21368-PA | 275..681 | 1..407 | 2044 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18808-PA | 4542 | GL18808-PA | 1..380 | 1..380 | 1936 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25805-PA | 18482 | GA25805-PA | 7960..8339 | 1..380 | 1940 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18531-PA | 8290 | GM18531-PA | 7884..8290 | 1..407 | 2138 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23326-PA | 2547 | GD23326-PA | 1446..1825 | 1..380 | 1978 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11158-PA | 8387 | GJ11158-PA | 7981..8387 | 1..407 | 2035 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24496-PA | 7988 | GK24496-PA | 7582..7988 | 1..407 | 2050 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11346-PA | 8015 | GE11346-PA | 7609..8015 | 1..407 | 2127 | 98.8 | Plus |