BDGP Sequence Production Resources |
Search the DGRC for SD10476
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 104 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | PIG-S-RC |
Protein status: | SD10476.pep: gold |
Preliminary Size: | 2157 |
Sequenced Size: | 1761 |
Gene | Date | Evidence |
---|---|---|
CG31120 | 2001-10-10 | Blastp of sequenced clone |
CG31120 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31120 | 2008-04-29 | Release 5.5 accounting |
CG31120 | 2008-08-15 | Release 5.9 accounting |
CG31120 | 2008-12-18 | 5.12 accounting |
1761 bp (1761 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061834
> SD10476.complete CTGCACAAGCCAATTTTTTTATTTTCCCTGGCAAAAATTCACGTTTTTAA CCGAAAATTTGACTCACAGCATCATGGAAACCTCGAGCTCCAGTCCAGTA AAGCCCAGGAGAAAAGACAAGGACGAAGATAAGTTCCGGATCGGGGCTAC ACTAGCATTTATCGTGGTCATCATTGGAATTGGCGTGCCCATGTGGTGGC GCACCACCACAGTCTACAGAGTCAATTTGCCCTCGACGGAAATTTTGAGT CTGAGTAAAATTCCGATCAAAACGGCTGTGCAGGTGGCCATCTACACACA ACAGACCAGTCGTGGCCAGTTGCTCATCGCCGAACTGCAGAACGCCTTCA GCGACAATGAAATATGGTCTGTGGAATTCAAGCAGCTATCTCCTACGCCA ATGACCCAGGAAGCACACACGCCAGCTGCTCTGGAGAAGCTGTTGCTGGA GAACCATGTCCAGAGCGTTGGCGACTTCATGTTCATCGAGTGGCCCAAAC TGCAGGAGGAGCTGCTACTAACCACCGAAAGATCGGCACTGATGCGAAGT GATACACCTTCCAACAAAATCGCCCAGCTCCTGCACGCCAAGATCCTGCA GACGTATCGCATAAATCAAATTTTAAGTACCGATGAGCGGATGGGCGCCA AGTCGGAAGCTCCGCAACCAGCCTACGATGTGATTGTCTCTGTCCTGAAT CCGAAACCGAGACTCACCCATGCCAAGTGGAACATAGCAATGGCTGTGAA GACTTACATTGAGCCCTGGTTGGCTAAGGTGTCCGGTGTTTCCAATTACA CGGTGCGATCGCAGTGGAAGTACCGGGTGGCCATCGAGGCTGATCTCAAG CAGGTGCGCGACCAGAGCAAATTGGGGCGACACTACGCCCTCCAGGAAAC CGCTCTGCCTCATCTGCTGACATCGATTGCCCAGAATCTAAGCGCCAGCA CCACCGACAAGCCGGCCATCAACCTGGTGGTGTACATTCCACCGTGCCAC ATCGCTCCGCTTCACATCTACAACAGCAAGGATCAGCGGCTGACGCGGAA CGACGTGGATGCCTTCATTTCGCCACCCTGGGGTGGCTTCATCATTGCTA ATCCGCCAGAGCATGTGTGCCTTGCGGCCATGAGCGATCAGGAGGCAGTT CCCTACCATGTCAGCACCACGGACAACATGCAGGTGATGCTGGACCAGCT GCACAAGCTGCTCGACATCAGCAGTGAGCTTCAGATGGAGGGCGTTAAGG TGGTGGATATCGAGCAACTGGAGCCACGTCGCTGGGAGTATGAAGCATAC CTAAGACGCAGTGCCATTCGACACATATCCACAGCAAGCAGCACGCTCCA GAGCCTCATCAAACTGTTGGATCAAATCAGCTACATTGTGATAGACGACG AGGTGGGTGCCGCCATTACAAATTCCTATGCCGACATCTTGGCTGCCAAG GCTGCTCTTTTGGAGCACCGACTGGCGGACGCTTCGGTGCTGGCCAAGCG TGCGTTCGTGGCCTCGGAGCGGGGATTCTTTGACGCCAGCCTGCTGGCGC AGTTGTACTTCCCGGACGAGCAGAAGTACGCCATCTACATTCCACTCTTC TTGCCCATCATGGTGCCTGTACTGAGTTCCTTCAACATGCTGCGTGGTGT GCTGCAGGCCAGACGGAAGGAGAAGCAGTCGTAAACGAACCGTAACCAAA TAGTATCATCCCTCATTAAAACAATATTTTCTTTATAAGCAAAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20737013..20737630 | 1370..753 | 3090 | 100 | Minus |
chr3R | 27901430 | chr3R | 20736398..20736768 | 1740..1370 | 1825 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 20738379..20738577 | 557..359 | 995 | 100 | Minus |
chr3R | 27901430 | chr3R | 20737692..20737886 | 752..558 | 975 | 100 | Minus |
chr3R | 27901430 | chr3R | 20738633..20738775 | 359..217 | 715 | 100 | Minus |
chr3R | 27901430 | chr3R | 20740889..20741022 | 134..1 | 655 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 20738831..20738923 | 219..127 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 24913827..24914444 | 1370..753 | 3090 | 100 | Minus |
3R | 32079331 | 3R | 24913212..24913582 | 1740..1370 | 1825 | 99.5 | Minus |
3R | 32079331 | 3R | 24915193..24915391 | 557..359 | 995 | 100 | Minus |
3R | 32079331 | 3R | 24914506..24914700 | 752..558 | 975 | 100 | Minus |
3R | 32079331 | 3R | 24915447..24915589 | 359..217 | 715 | 100 | Minus |
3R | 32079331 | 3R | 24917703..24917836 | 134..1 | 655 | 99.3 | Minus |
3R | 32079331 | 3R | 24915645..24915737 | 219..127 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 24654658..24655275 | 1370..753 | 3090 | 100 | Minus |
3R | 31820162 | 3R | 24654043..24654413 | 1740..1370 | 1825 | 99.4 | Minus |
3R | 31820162 | 3R | 24656024..24656222 | 557..359 | 995 | 100 | Minus |
3R | 31820162 | 3R | 24655337..24655531 | 752..558 | 975 | 100 | Minus |
3R | 31820162 | 3R | 24656278..24656420 | 359..217 | 715 | 100 | Minus |
3R | 31820162 | 3R | 24658534..24658667 | 134..1 | 655 | 99.2 | Minus |
3R | 31820162 | 3R | 24656476..24656568 | 219..127 | 465 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20736398..20736767 | 1371..1740 | 99 | <- | Minus |
chr3R | 20737013..20737630 | 753..1370 | 100 | <- | Minus |
chr3R | 20737692..20737886 | 558..752 | 100 | <- | Minus |
chr3R | 20738379..20738576 | 360..557 | 100 | <- | Minus |
chr3R | 20738633..20738772 | 220..359 | 100 | <- | Minus |
chr3R | 20738831..20738921 | 129..219 | 100 | <- | Minus |
chr3R | 20740895..20741022 | 1..128 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31120-RB | 1..1611 | 74..1684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31120-RB | 1..1611 | 74..1684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PIG-S-RC | 1..1611 | 74..1684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31120-RB | 1..1611 | 74..1684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PIG-S-RC | 1..1611 | 74..1684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31120-RB | 1..1684 | 1..1684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31120-RB | 25..1760 | 1..1736 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PIG-S-RC | 29..1764 | 1..1736 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31120-RB | 1..1684 | 1..1684 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
PIG-S-RC | 29..1764 | 1..1736 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24913212..24913581 | 1371..1740 | 99 | <- | Minus |
3R | 24913827..24914444 | 753..1370 | 100 | <- | Minus |
3R | 24914506..24914700 | 558..752 | 100 | <- | Minus |
3R | 24915193..24915390 | 360..557 | 100 | <- | Minus |
3R | 24915447..24915586 | 220..359 | 100 | <- | Minus |
3R | 24915645..24915735 | 129..219 | 100 | <- | Minus |
3R | 24917709..24917836 | 1..128 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24913212..24913581 | 1371..1740 | 99 | <- | Minus |
3R | 24913827..24914444 | 753..1370 | 100 | <- | Minus |
3R | 24914506..24914700 | 558..752 | 100 | <- | Minus |
3R | 24915193..24915390 | 360..557 | 100 | <- | Minus |
3R | 24915447..24915586 | 220..359 | 100 | <- | Minus |
3R | 24915645..24915735 | 129..219 | 100 | <- | Minus |
3R | 24917709..24917836 | 1..128 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24913212..24913581 | 1371..1740 | 99 | <- | Minus |
3R | 24913827..24914444 | 753..1370 | 100 | <- | Minus |
3R | 24914506..24914700 | 558..752 | 100 | <- | Minus |
3R | 24915193..24915390 | 360..557 | 100 | <- | Minus |
3R | 24915447..24915586 | 220..359 | 100 | <- | Minus |
3R | 24915645..24915735 | 129..219 | 100 | <- | Minus |
3R | 24917709..24917836 | 1..128 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20738934..20739303 | 1371..1740 | 99 | <- | Minus |
arm_3R | 20739549..20740166 | 753..1370 | 100 | <- | Minus |
arm_3R | 20740228..20740422 | 558..752 | 100 | <- | Minus |
arm_3R | 20740915..20741112 | 360..557 | 100 | <- | Minus |
arm_3R | 20741169..20741308 | 220..359 | 100 | <- | Minus |
arm_3R | 20741367..20741457 | 129..219 | 100 | <- | Minus |
arm_3R | 20743431..20743558 | 1..128 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24654043..24654412 | 1371..1740 | 99 | <- | Minus |
3R | 24654658..24655275 | 753..1370 | 100 | <- | Minus |
3R | 24655337..24655531 | 558..752 | 100 | <- | Minus |
3R | 24656024..24656221 | 360..557 | 100 | <- | Minus |
3R | 24656278..24656417 | 220..359 | 100 | <- | Minus |
3R | 24656476..24656566 | 129..219 | 100 | <- | Minus |
3R | 24658540..24658667 | 1..128 | 100 | Minus |
Translation from 0 to 1683
> SD10476.hyp CTSQFFYFPWQKFTFLTENLTHSIMETSSSSPVKPRRKDKDEDKFRIGAT LAFIVVIIGIGVPMWWRTTTVYRVNLPSTEILSLSKIPIKTAVQVAIYTQ QTSRGQLLIAELQNAFSDNEIWSVEFKQLSPTPMTQEAHTPAALEKLLLE NHVQSVGDFMFIEWPKLQEELLLTTERSALMRSDTPSNKIAQLLHAKILQ TYRINQILSTDERMGAKSEAPQPAYDVIVSVLNPKPRLTHAKWNIAMAVK TYIEPWLAKVSGVSNYTVRSQWKYRVAIEADLKQVRDQSKLGRHYALQET ALPHLLTSIAQNLSASTTDKPAINLVVYIPPCHIAPLHIYNSKDQRLTRN DVDAFISPPWGGFIIANPPEHVCLAAMSDQEAVPYHVSTTDNMQVMLDQL HKLLDISSELQMEGVKVVDIEQLEPRRWEYEAYLRRSAIRHISTASSTLQ SLIKLLDQISYIVIDDEVGAAITNSYADILAAKAALLEHRLADASVLAKR AFVASERGFFDASLLAQLYFPDEQKYAIYIPLFLPIMVPVLSSFNMLRGV LQARRKEKQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PIG-S-PC | 536 | CG44255-PC | 1..536 | 25..560 | 2716 | 100 | Plus |
Translation from 73 to 1683
> SD10476.pep METSSSSPVKPRRKDKDEDKFRIGATLAFIVVIIGIGVPMWWRTTTVYRV NLPSTEILSLSKIPIKTAVQVAIYTQQTSRGQLLIAELQNAFSDNEIWSV EFKQLSPTPMTQEAHTPAALEKLLLENHVQSVGDFMFIEWPKLQEELLLT TERSALMRSDTPSNKIAQLLHAKILQTYRINQILSTDERMGAKSEAPQPA YDVIVSVLNPKPRLTHAKWNIAMAVKTYIEPWLAKVSGVSNYTVRSQWKY RVAIEADLKQVRDQSKLGRHYALQETALPHLLTSIAQNLSASTTDKPAIN LVVYIPPCHIAPLHIYNSKDQRLTRNDVDAFISPPWGGFIIANPPEHVCL AAMSDQEAVPYHVSTTDNMQVMLDQLHKLLDISSELQMEGVKVVDIEQLE PRRWEYEAYLRRSAIRHISTASSTLQSLIKLLDQISYIVIDDEVGAAITN SYADILAAKAALLEHRLADASVLAKRAFVASERGFFDASLLAQLYFPDEQ KYAIYIPLFLPIMVPVLSSFNMLRGVLQARRKEKQS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18678-PA | 1037 | GF18678-PA | 519..1037 | 18..536 | 2445 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12302-PA | 536 | GG12302-PA | 1..536 | 1..536 | 2741 | 95.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14258-PA | 525 | GH14258-PA | 3..524 | 14..535 | 2261 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PIG-S-PC | 536 | CG44255-PC | 1..536 | 1..536 | 2716 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23151-PA | 527 | GI23151-PA | 11..526 | 20..535 | 2224 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23076-PA | 497 | GL23076-PA | 1..496 | 40..535 | 2221 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30146-PB | 536 | GA30146-PB | 1..535 | 1..535 | 2385 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23445-PA | 382 | GM23445-PA | 9..382 | 163..536 | 1975 | 99.2 | Plus |
Dsec\GM16467-PA | 148 | GM16467-PA | 4..145 | 20..161 | 718 | 96.5 | Plus |
Dsec\GM17769-PA | 135 | GM17769-PA | 18..131 | 20..133 | 565 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18252-PA | 536 | GD18252-PA | 1..536 | 1..536 | 2812 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10453-PA | 536 | GJ10453-PA | 19..535 | 19..535 | 2286 | 81 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14273-PA | 526 | GK14273-PA | 7..520 | 18..531 | 2185 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10757-PA | 536 | GE10757-PA | 1..536 | 1..536 | 2750 | 96.5 | Plus |