BDGP Sequence Production Resources |
Search the DGRC for SD10629
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 106 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | Spred-RA |
Protein status: | SD10629.pep: gold |
Preliminary Size: | 2671 |
Sequenced Size: | 2636 |
Gene | Date | Evidence |
---|---|---|
CG10155 | 2001-11-09 | Blastp of sequenced clone |
CG10155 | 2003-01-01 | Sim4 clustering to Release 3 |
Spred | 2008-04-29 | Release 5.5 accounting |
Spred | 2008-08-15 | Release 5.9 accounting |
Spred | 2008-12-18 | 5.12 accounting |
2636 bp (2636 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069866
> SD10629.complete TCAATTGTTGTGAATATATCTGCTTAATTGTAAAAAAACGCCCAATCGGA AAAAGCACAAATATACGCAAAAAAATTTGCGAACAAGCAGCAAAATGAAT GAATAGAACCCCCCCAACTCTTTGCAAAGCCCCGCCCCCAAAATTGTGCC AAAACGCAAGAGACGCAGAGAAACGAAAAGAGGAAGAGTACTGGAGATCG GCGAGATATTGCAAGTCGGATAACAACAGCAAAAACAACAACGTGGGATT GGATCGCCTAAGCAACTATTTGACTATCTTCTGGTGTTGTTGTTGTCGCT CGATTACACTTTTTTCGTTGAAAACGTTTGTGCAGCAGCAGCTCTGAATG TCTTTATGCTTTAATCATGGTGTATTTCGCCACCAACAACAACAACACCG ACACTACACGCTGCTATATTAGAATCTTTCTGATAACGAACCATGACAGA AGGACATGAAAGCGACTTCTTAGTAACAGTACGCGCACAGGTAATGACCA GAGACGAGAGCACCGAGGGCTGGCTTCCGCTGGCCGGGGGTGGCCTGGCC AATGTTTCGATCCGGAAGCGGGCTAGGCTATCCCCATTGGCATCGGGTCA TGACTACATCATCTACGGGCAGAGGATATCCGATCAGAGCGTCATCTTGA GCTGTGTGATCAATCGTGATCTGAAGTATTACAAAGTAATGCCCACATTT CATCATTGGCGCGCAGGGAAGCAGCGGAATGGACTCACATTTCAAACGGC CGCCGATGCGCGAGCCTTTGACAAGGGCGTCCTGCGCGCCTACAACGAGC TGATCGATGGACTGGCCAAATCGAATCCAACGATAATATGCCCACCGCTA ACCAAATATGATTCGGTTGGCGAAGATGATGTATTCATGACCCTGGACTT ACCTGTGGAGAGCGAGAGTTTACAAAAGATCCATTCAAGCCCCGAGGGCA GCGAGAAAAGTCACAAGAGCGTCAGCAACAACTCCGACTCGGAGAAGCTG CCTCCGCCGCCCATTCACTACATATCCACGGACAAAACATCGGCCACCAC GTCGCCGCCAGACGCACCGCCCGCTTCTGCTGCTCCATCGCCGGCGACGG CCGGCCAGATAGCGGCCAGTGAGAACTACTCGTACGTGACGCTGACGGCG GTGCACCACGACTACAACTATCCGGTGGTGGACCAGCCGGTGGGGGCGCA GGTGCTCAATGCTCGCAGGGAGTCGATCAGTGCACTAAAGAAGCGCAACG CTCTGGAGGCGGCGCAGGCGATGGCGGCGGCTCAGACGGCGGCGGGTGGT GGACTGGCCTGTCGCGACGGCGGATCGGGAAAGCCACTGCACAAGCCGAA CGTATCCGACATACTGAAGAAGGAGACGCGCCTGCGATGCCGCTACTGCC ACGAGCTGTACAGCGAGGACTTCAATCGGCGGGGCGCCTGCGAATATGCC CCGGATGCGTTTCGCAGCGGCTACGAGTGCATCTCTGGGATGGGCTGTGC CCGTTGCATGATCTACCACTGCATGAGCGACGCCGAGGGCGAGACGGCCC AGCATCCGTGCGACTGCAGCGCCAGCGAGGCCGGCTGCAGCAAGCGCTGG CTGGGCCTGGCGATCCTCTCGTTGTTCGTGCCCTGCCTGTGGTGCTATCC GCCGCTCCGCGCCTGCCACTTGGCCGGCATCCACTGCGGCCTCTGCGGCG GGCAGCACAAGCCGCATGTCTGACATTTGGAGGCCCGCTTGCAAGGACAG CACGATGATGACCCCAGGCCCAGAAGCGAATTCCACTACCACCACTCCGA GCAGAGCATAATGAACAGCGCCAAGCGTCCGTGGGGCGCCAAGCAGAAGC AGTCGCAGCAATCACAGCAATCGCAGCGTCATTTTTACAACTGGGAGCTG TCGCACAGCTTGGGTGCTCCCCAGCATCAGACTCCGCCGTATTTAATGCA ATCAACTGGCAGGAAGGCACCGCAGAACGATTACGGACGCTTGCTGTTCT AGGCTTTATCCATGATGACAGCCTGAGGACTCATTTTTGCAAACTGATTA CCAAGAAGTACTGATTATTTCACCAGATCTACGGTATCTTAAAGATATCT AAAAGTGGACAAGGAAATGTTTTTCTGATAAATGGCAAGAAAACAATGTT TTCACACTGTTGAGATGAAAAAATCGTGTCGATGCAAAAGCACAGCTTTT TCAAATCGGGTGAAAGAAGAATGCGTAAGAAGCAATTCAGCTTGAAAATC AGTTTGCCAAAATGGGTCTGGGGTTCGATTTTAGTATCATTTCGGTATAC TCCATTTGAATTGCCATAATTAATTGTATATACAAAAGAGCAGGAAGGAT TATATATCTAATTTTAATATACTTTTAAAATTGTAACTTATGTTTAGTGC TCTCGCTTAATTATAGTTTTGTAAAAACGGGCTATTTGTTTTTATTCGTA ACTGAAACATATTTTTTTGAAAAATCAAAATATTATACAATGATTGTTTT AGTTTTAGTTGTTTAGGGTTTTTTGCTATTTTACACTTGCTTGTTTACAA TTCGAAATTGGAGAACAGTATTAAAAGGCCAAGGCGAAGGCAAAGGCGAA ACGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10648442..10650082 | 2605..966 | 8065 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 10655299..10655665 | 462..96 | 1820 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 10651344..10651525 | 642..461 | 910 | 100 | Minus |
chr2R | 21145070 | chr2R | 10651116..10651285 | 810..641 | 850 | 100 | Minus |
chr2R | 21145070 | chr2R | 10650205..10650361 | 965..809 | 785 | 100 | Minus |
chr2R | 21145070 | chr2R | 10656575..10656668 | 95..1 | 425 | 98.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14761154..14762796 | 2607..966 | 8090 | 99.6 | Minus |
2R | 25286936 | 2R | 14768004..14768370 | 462..96 | 1820 | 99.7 | Minus |
2R | 25286936 | 2R | 14764058..14764239 | 642..461 | 895 | 99.5 | Minus |
2R | 25286936 | 2R | 14763830..14763999 | 810..641 | 835 | 99.4 | Minus |
2R | 25286936 | 2R | 14762919..14763075 | 965..809 | 785 | 100 | Minus |
2R | 25286936 | 2R | 14769278..14769372 | 95..1 | 475 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14762353..14763995 | 2607..966 | 8100 | 99.6 | Minus |
2R | 25260384 | 2R | 14769203..14769569 | 462..96 | 1820 | 99.7 | Minus |
2R | 25260384 | 2R | 14765257..14765438 | 642..461 | 895 | 99.4 | Minus |
2R | 25260384 | 2R | 14765029..14765198 | 810..641 | 835 | 99.4 | Minus |
2R | 25260384 | 2R | 14764118..14764274 | 965..809 | 785 | 100 | Minus |
2R | 25260384 | 2R | 14770477..14770571 | 95..1 | 475 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dkoe\Gandalf | 979 | Dkoe\Gandalf DK29466 979bp Derived from U29466 (Rel. 63, Last updated, Version 5). | 722..946 | 2342..2555 | 160 | 58.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10651346..10651523 | 463..640 | 100 | <- | Minus |
chr2R | 10655299..10655665 | 96..462 | 99 | <- | Minus |
chr2R | 10656575..10656668 | 1..95 | 98 | Minus | |
chr2R | 10648442..10650082 | 966..2605 | 99 | <- | Minus |
chr2R | 10650205..10650360 | 810..965 | 100 | <- | Minus |
chr2R | 10651117..10651285 | 641..809 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RA | 1..1281 | 443..1723 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RA | 1..1281 | 443..1723 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RC | 1..1560 | 443..2002 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RA | 1..1281 | 443..1723 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RC | 1..1560 | 443..2002 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RA | 51..2656 | 1..2605 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RA | 51..2656 | 1..2605 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RA | 52..2657 | 1..2605 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RA | 51..2656 | 1..2605 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Spred-RA | 52..2657 | 1..2605 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14761156..14762796 | 966..2605 | 99 | <- | Minus |
2R | 14762919..14763074 | 810..965 | 100 | <- | Minus |
2R | 14763831..14763999 | 641..809 | 99 | <- | Minus |
2R | 14764060..14764237 | 463..640 | 99 | <- | Minus |
2R | 14768004..14768370 | 96..462 | 99 | <- | Minus |
2R | 14769278..14769372 | 1..95 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14761156..14762796 | 966..2605 | 99 | <- | Minus |
2R | 14762919..14763074 | 810..965 | 100 | <- | Minus |
2R | 14763831..14763999 | 641..809 | 99 | <- | Minus |
2R | 14764060..14764237 | 463..640 | 99 | <- | Minus |
2R | 14768004..14768370 | 96..462 | 99 | <- | Minus |
2R | 14769278..14769372 | 1..95 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14761156..14762796 | 966..2605 | 99 | <- | Minus |
2R | 14762919..14763074 | 810..965 | 100 | <- | Minus |
2R | 14763831..14763999 | 641..809 | 99 | <- | Minus |
2R | 14764060..14764237 | 463..640 | 99 | <- | Minus |
2R | 14768004..14768370 | 96..462 | 99 | <- | Minus |
2R | 14769278..14769372 | 1..95 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10648661..10650301 | 966..2605 | 99 | <- | Minus |
arm_2R | 10650424..10650579 | 810..965 | 100 | <- | Minus |
arm_2R | 10651336..10651504 | 641..809 | 99 | <- | Minus |
arm_2R | 10651565..10651742 | 463..640 | 99 | <- | Minus |
arm_2R | 10655509..10655875 | 96..462 | 99 | <- | Minus |
arm_2R | 10656783..10656877 | 1..95 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14765259..14765436 | 463..640 | 99 | <- | Minus |
2R | 14762355..14763995 | 966..2605 | 99 | <- | Minus |
2R | 14764118..14764273 | 810..965 | 100 | <- | Minus |
2R | 14765030..14765198 | 641..809 | 99 | <- | Minus |
2R | 14769203..14769569 | 96..462 | 99 | <- | Minus |
2R | 14770477..14770571 | 1..95 | 100 | Minus |
Translation from 442 to 1722
> SD10629.pep MTEGHESDFLVTVRAQVMTRDESTEGWLPLAGGGLANVSIRKRARLSPLA SGHDYIIYGQRISDQSVILSCVINRDLKYYKVMPTFHHWRAGKQRNGLTF QTAADARAFDKGVLRAYNELIDGLAKSNPTIICPPLTKYDSVGEDDVFMT LDLPVESESLQKIHSSPEGSEKSHKSVSNNSDSEKLPPPPIHYISTDKTS ATTSPPDAPPASAAPSPATAGQIAASENYSYVTLTAVHHDYNYPVVDQPV GAQVLNARRESISALKKRNALEAAQAMAAAQTAAGGGLACRDGGSGKPLH KPNVSDILKKETRLRCRYCHELYSEDFNRRGACEYAPDAFRSGYECISGM GCARCMIYHCMSDAEGETAQHPCDCSASEAGCSKRWLGLAILSLFVPCLW CYPPLRACHLAGIHCGLCGGQHKPHV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13513-PA | 529 | GF13513-PA | 1..429 | 1..425 | 1947 | 92.8 | Plus |
Dana\GF11575-PA | 818 | GF11575-PA | 147..260 | 10..129 | 165 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22399-PA | 426 | GG22399-PA | 1..426 | 1..426 | 2277 | 99.3 | Plus |
Dere\GG21948-PA | 834 | GG21948-PA | 153..285 | 10..151 | 171 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21145-PA | 514 | GH21145-PA | 1..411 | 1..412 | 1868 | 86.2 | Plus |
Dgri\GH22638-PA | 830 | GH22638-PA | 154..267 | 10..129 | 172 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Spred-PC | 519 | CG10155-PC | 1..426 | 1..426 | 2284 | 100 | Plus |
Spred-PA | 426 | CG10155-PA | 1..426 | 1..426 | 2284 | 100 | Plus |
Spred-PB | 404 | CG10155-PB | 1..404 | 1..426 | 2133 | 94.8 | Plus |
ena-PG | 664 | CG15112-PG | 6..198 | 10..209 | 182 | 26.3 | Plus |
ena-PD | 687 | CG15112-PD | 6..198 | 10..209 | 182 | 26.3 | Plus |
ena-PB | 834 | CG15112-PB | 151..343 | 10..209 | 182 | 26.3 | Plus |
ena-PE | 684 | CG15112-PE | 6..192 | 10..209 | 172 | 26.8 | Plus |
ena-PC | 684 | CG15112-PC | 6..192 | 10..209 | 172 | 26.8 | Plus |
ena-PA | 684 | CG15112-PA | 6..192 | 10..209 | 172 | 26.8 | Plus |
ena-PF | 980 | CG15112-PF | 302..488 | 10..209 | 172 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18744-PA | 434 | GI18744-PA | 1..434 | 1..426 | 1926 | 86.6 | Plus |
Dmoj\GI18914-PA | 553 | GI18914-PA | 167..280 | 10..129 | 174 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10623-PA | 421 | GL10623-PA | 1..421 | 1..426 | 1896 | 89.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10117-PA | 421 | GA10117-PA | 1..421 | 1..426 | 1901 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20184-PA | 426 | GM20184-PA | 1..426 | 1..426 | 2273 | 99.3 | Plus |
Dsec\GM21935-PA | 819 | GM21935-PA | 150..282 | 10..151 | 171 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25657-PA | 426 | GD25657-PA | 1..426 | 1..426 | 2291 | 100 | Plus |
Dsim\GD11431-PA | 684 | GD11431-PA | 6..189 | 10..200 | 171 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21766-PA | 431 | GJ21766-PA | 1..431 | 1..426 | 1935 | 87.4 | Plus |
Dvir\GJ19769-PA | 816 | GJ19769-PA | 154..267 | 10..129 | 172 | 29.8 | Plus |
Translation from 442 to 1722
> SD10629.hyp MTEGHESDFLVTVRAQVMTRDESTEGWLPLAGGGLANVSIRKRARLSPLA SGHDYIIYGQRISDQSVILSCVINRDLKYYKVMPTFHHWRAGKQRNGLTF QTAADARAFDKGVLRAYNELIDGLAKSNPTIICPPLTKYDSVGEDDVFMT LDLPVESESLQKIHSSPEGSEKSHKSVSNNSDSEKLPPPPIHYISTDKTS ATTSPPDAPPASAAPSPATAGQIAASENYSYVTLTAVHHDYNYPVVDQPV GAQVLNARRESISALKKRNALEAAQAMAAAQTAAGGGLACRDGGSGKPLH KPNVSDILKKETRLRCRYCHELYSEDFNRRGACEYAPDAFRSGYECISGM GCARCMIYHCMSDAEGETAQHPCDCSASEAGCSKRWLGLAILSLFVPCLW CYPPLRACHLAGIHCGLCGGQHKPHV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Spred-PC | 519 | CG10155-PC | 1..426 | 1..426 | 2284 | 100 | Plus |
Spred-PA | 426 | CG10155-PA | 1..426 | 1..426 | 2284 | 100 | Plus |
Spred-PB | 404 | CG10155-PB | 1..404 | 1..426 | 2133 | 94.8 | Plus |
ena-PG | 664 | CG15112-PG | 6..198 | 10..209 | 182 | 26.3 | Plus |
ena-PD | 687 | CG15112-PD | 6..198 | 10..209 | 182 | 26.3 | Plus |