BDGP Sequence Production Resources |
Search the DGRC for SD10657
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 106 |
Well: | 57 |
Vector: | pOT2 |
Associated Gene/Transcript | Flo1-RA |
Protein status: | SD10657.pep: gold |
Preliminary Size: | 1884 |
Sequenced Size: | 1821 |
Gene | Date | Evidence |
---|---|---|
CG8200 | 2001-09-19 | Blastp of sequenced clone |
CG8200 | 2003-01-01 | Sim4 clustering to Release 3 |
Flo | 2008-04-29 | Release 5.5 accounting |
Flo | 2008-08-15 | Release 5.9 accounting |
Flo | 2008-12-18 | 5.12 accounting |
1821 bp (1821 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058794
> SD10657.complete AACCGGTCGGATTTCTGAATCTTAAGCACCGAGTACCTCGGAAATTCTTT TATACATATTATTAGACGAATAAACAAGGCTACCTGTGGATCGGATAATT CGCTATATAGTTAATAATCGGAAAACTGTGTTAACCACGCAGATAAAACA AAAGCTGTTATCAGCAGCAACCCATTTTCTAATATAAATAACAAAAAAGT GCTGCAGAAATGACTTGGGGATTTGTAACCTGCGGCCCCAACGAGGCTTT AGTTGTCTCTGGGTGCTGCTACATGAAGCCGCTTTTGGTGCCGGGAGGAC GAGCATTCGTTTGGCCAGTGGGCCAGCAGGTTCAGCGAATTTCGTTGAAC ACGATGACCCTCCAGGTAGAGAGTCCTTGCGTGTACACCAGCCAAGGAGT GCCCATCTCGGTGACAGGCATTGCACAGGTGAAGGTCCAGGGTCAGAACG AAGACATGCTGCTGACCGCCTGTGAGCAGTTCTTGGGCAAATCAGAGGCA GAGATCAACCACATCGCCTTGGTCACCCTGGAGGGGCATCAGCGTGCCAT CATGGGTTCGATGACCGTGGAGGAGATCTACAAGGACCGCAAGAAGTTCA GCAAGCAGGTGTTTGAGGTGGCCTCCAGCGATTTGGCCAACATGGGAATA ACCGTGGTTTCCTACACCATCAAGGATTTGCGCGATGAGGAGGGCTACCT GCGGTCATTGGGTATGGCTCGCACGGCGGAGGTGAAGCGCGATGCCCGCA TTGGCGAGGCTGAGGCCCGAGCGGAGGCCCACATTAAGGAGGCTATTGCC GAGGAGCAACGCATGGCCGCACGCTTCCTCAACGATACCGATATTGCCAA GGCCCAGCGCGACTTTGAGCTGAAGAAGGCAGCATACGATGTGGAAGTGC AGACCAAAAAGGCCGAGGCCGAGATGGCCTACGAGCTGCAAGCGGCCAAG ACCAAGCAGCGCATCAAGGAGGAGCAGATGCAGGTGAAGGTGATCGAGCG CACGCAGGAGATTGCCGTCCAGGAGCAGGAGATCATGCGCCGCGAGCGGG AGCTGGAGGCCACCATCCGCCGACCGGCCGAGGCGGAGAAGTTCCGCATG GAGAAATTGGCCGAGGCCAACAAGCAGCGCGTGGTCATGGAAGCCGAGGC CGAGGCTGAATCGATCAGGATTCGTGGTGAGGCTGAGGCCTTTGCCATTG CGGCCAAGGCTAAAGCAGAGGCCGAGCAGATGGCCATGAAGGCAGAGGCC TATCGCGAGTACCGCGAGGCTGCGATGGTGGAGATGCTCCTGGACACACT GCCAAAGGTTGCCGCCGAGGTGGCTGCTCCACTGTCGCAGGCTAAGAAGA TCACGATGGTGTCCAGCGGAACTGGCGATATCGGTGCTGCCAAGCTGACC GGCGAGGTTCTGTCGATCGTCAACAAAGTGCCAGAGCTGGTCAAGAACAT AACCGGCGTGGACATTGCTCGGTCTGTGCATGCTGGCTAAAAAAGTACCC AAAAGAAAACCAAAAACACACAAAATTATGTACTCTTCAAAACGAAAATA AGAAAACAAAAAAGAAATTACGCTATATTGAACGATCGAATACTTCAAAA CTGAAATCGAACGCATTTAAATTTCTTTATAATTAATATATTATTGAATC TTTGTGCTAACCCGACAAATTTTGCAACATGTTTTACACACACACACTCA GAGAGAGGAGCAAAAATATTTTGTATTACATGTATAATGTATTTATATAA GTGTATTGCACAAAGCGTGGAATAAATATTCTTCCTTGGATCAACAAAAA AAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Flo-RA | 1862 | Flo-RA | 57..1852 | 1..1798 | 8755 | 99.2 | Plus |
Flo-RB | 1874 | Flo-RB | 759..1864 | 691..1798 | 5365 | 99 | Plus |
Flo.a | 1869 | Flo.a | 759..1859 | 691..1798 | 5265 | 98.6 | Plus |
Flo-RB | 1874 | Flo-RB | 57..751 | 1..695 | 3415 | 99.4 | Plus |
Flo.a | 1869 | Flo.a | 57..751 | 1..695 | 3415 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11454395..11454867 | 1163..691 | 2245 | 98.3 | Minus |
chr2R | 21145070 | chr2R | 11455303..11455659 | 693..337 | 1770 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 11453423..11453744 | 1795..1472 | 1555 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 11456274..11456535 | 262..1 | 1265 | 98.9 | Minus |
chr2R | 21145070 | chr2R | 11453955..11454121 | 1472..1306 | 820 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 11454178..11454325 | 1310..1163 | 740 | 100 | Minus |
chr2R | 21145070 | chr2R | 11455903..11455979 | 337..261 | 370 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 15567243..15567715 | 1163..691 | 2305 | 99.2 | Minus |
2R | 25286936 | 2R | 15568151..15568507 | 693..337 | 1770 | 99.7 | Minus |
2R | 25286936 | 2R | 15566268..15566592 | 1798..1472 | 1570 | 99.4 | Minus |
2R | 25286936 | 2R | 15569118..15569379 | 262..1 | 1265 | 98.9 | Minus |
2R | 25286936 | 2R | 15566803..15566969 | 1472..1306 | 820 | 99.4 | Minus |
2R | 25286936 | 2R | 15567026..15567173 | 1310..1163 | 695 | 98 | Minus |
2R | 25286936 | 2R | 15568751..15568827 | 337..261 | 385 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 15568442..15568914 | 1163..691 | 2305 | 99.1 | Minus |
2R | 25260384 | 2R | 15569350..15569706 | 693..337 | 1770 | 99.7 | Minus |
2R | 25260384 | 2R | 15567467..15567791 | 1798..1472 | 1580 | 99.3 | Minus |
2R | 25260384 | 2R | 15570317..15570578 | 262..1 | 1265 | 98.8 | Minus |
2R | 25260384 | 2R | 15568002..15568168 | 1472..1306 | 820 | 99.4 | Minus |
2R | 25260384 | 2R | 15568225..15568372 | 1310..1163 | 695 | 97.9 | Minus |
2R | 25260384 | 2R | 15569950..15570026 | 337..261 | 385 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11453955..11454119 | 1308..1472 | 99 | <- | Minus |
chr2R | 11454181..11454324 | 1164..1307 | 100 | <- | Minus |
chr2R | 11454395..11454865 | 693..1163 | 98 | <- | Minus |
chr2R | 11455304..11455658 | 338..692 | 99 | <- | Minus |
chr2R | 11455903..11455978 | 262..337 | 98 | <- | Minus |
chr2R | 11456275..11456535 | 1..261 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-RA | 1..1281 | 210..1490 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-RA | 1..1281 | 210..1490 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-1-RA | 1..1281 | 210..1490 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-RA | 1..1281 | 210..1490 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo1-RA | 1..1281 | 210..1490 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-RA | 24..1816 | 1..1795 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-RA | 24..1816 | 1..1795 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-1-RA | 26..1818 | 1..1795 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo-RA | 24..1816 | 1..1795 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Flo1-RA | 26..1818 | 1..1795 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15566271..15566591 | 1473..1795 | 99 | <- | Minus |
2R | 15566803..15566967 | 1308..1472 | 99 | <- | Minus |
2R | 15567029..15567172 | 1164..1307 | 97 | <- | Minus |
2R | 15567243..15567713 | 693..1163 | 99 | <- | Minus |
2R | 15568152..15568506 | 338..692 | 99 | <- | Minus |
2R | 15568751..15568826 | 262..337 | 100 | <- | Minus |
2R | 15569119..15569379 | 1..261 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15566271..15566591 | 1473..1795 | 99 | <- | Minus |
2R | 15566803..15566967 | 1308..1472 | 99 | <- | Minus |
2R | 15567029..15567172 | 1164..1307 | 97 | <- | Minus |
2R | 15567243..15567713 | 693..1163 | 99 | <- | Minus |
2R | 15568152..15568506 | 338..692 | 99 | <- | Minus |
2R | 15568751..15568826 | 262..337 | 100 | <- | Minus |
2R | 15569119..15569379 | 1..261 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15566271..15566591 | 1473..1795 | 99 | <- | Minus |
2R | 15566803..15566967 | 1308..1472 | 99 | <- | Minus |
2R | 15567029..15567172 | 1164..1307 | 97 | <- | Minus |
2R | 15567243..15567713 | 693..1163 | 99 | <- | Minus |
2R | 15568152..15568506 | 338..692 | 99 | <- | Minus |
2R | 15568751..15568826 | 262..337 | 100 | <- | Minus |
2R | 15569119..15569379 | 1..261 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11453776..11454096 | 1473..1795 | 99 | <- | Minus |
arm_2R | 11454308..11454472 | 1308..1472 | 99 | <- | Minus |
arm_2R | 11454534..11454677 | 1164..1307 | 97 | <- | Minus |
arm_2R | 11454748..11455218 | 693..1163 | 99 | <- | Minus |
arm_2R | 11455657..11456011 | 338..692 | 99 | <- | Minus |
arm_2R | 11456256..11456331 | 262..337 | 100 | <- | Minus |
arm_2R | 11456624..11456884 | 1..261 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 15568002..15568166 | 1308..1472 | 99 | <- | Minus |
2R | 15568228..15568371 | 1164..1307 | 97 | <- | Minus |
2R | 15567470..15567790 | 1473..1795 | 99 | <- | Minus |
2R | 15568442..15568912 | 693..1163 | 99 | <- | Minus |
2R | 15569351..15569705 | 338..692 | 99 | <- | Minus |
2R | 15569950..15570025 | 262..337 | 100 | <- | Minus |
2R | 15570318..15570578 | 1..261 | 98 | Minus |
Translation from 209 to 1489
> SD10657.pep MTWGFVTCGPNEALVVSGCCYMKPLLVPGGRAFVWPVGQQVQRISLNTMT LQVESPCVYTSQGVPISVTGIAQVKVQGQNEDMLLTACEQFLGKSEAEIN HIALVTLEGHQRAIMGSMTVEEIYKDRKKFSKQVFEVASSDLANMGITVV SYTIKDLRDEEGYLRSLGMARTAEVKRDARIGEAEARAEAHIKEAIAEEQ RMAARFLNDTDIAKAQRDFELKKAAYDVEVQTKKAEAEMAYELQAAKTKQ RIKEEQMQVKVIERTQEIAVQEQEIMRRERELEATIRRPAEAEKFRMEKL AEANKQRVVMEAEAEAESIRIRGEAEAFAIAAKAKAEAEQMAMKAEAYRE YREAAMVEMLLDTLPKVAAEVAAPLSQAKKITMVSSGTGDIGAAKLTGEV LSIVNKVPELVKNITGVDIARSVHAG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22637-PA | 430 | GF22637-PA | 1..430 | 1..426 | 2156 | 96 | Plus |
Dana\GF19486-PA | 438 | GF19486-PA | 6..428 | 7..421 | 956 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22345-PA | 430 | GG22345-PA | 1..430 | 1..426 | 2207 | 98.6 | Plus |
Dere\GG17854-PA | 438 | GG17854-PA | 6..428 | 7..421 | 964 | 47.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20287-PA | 430 | GH20287-PA | 1..430 | 1..426 | 2025 | 94.2 | Plus |
Dgri\GH12759-PA | 432 | GH12759-PA | 9..422 | 15..421 | 908 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Flo1-PA | 426 | CG8200-PA | 1..426 | 1..426 | 2099 | 100 | Plus |
Flo1-PB | 430 | CG8200-PB | 1..430 | 1..426 | 2084 | 99.1 | Plus |
Flo2-PB | 425 | CG32593-PB | 6..415 | 7..421 | 961 | 48.7 | Plus |
Flo2-PF | 425 | CG32593-PF | 6..415 | 7..421 | 961 | 48.7 | Plus |
Flo2-PL | 440 | CG32593-PL | 6..415 | 7..421 | 961 | 48.7 | Plus |
Flo2-PI | 435 | CG32593-PI | 6..425 | 7..421 | 955 | 47.7 | Plus |
Flo2-PA | 438 | CG32593-PA | 6..428 | 7..421 | 950 | 47.1 | Plus |
Flo2-PK | 438 | CG32593-PK | 6..428 | 7..421 | 950 | 47.1 | Plus |
Flo2-PE | 438 | CG32593-PE | 6..428 | 7..421 | 950 | 47.1 | Plus |
Flo2-PJ | 448 | CG32593-PJ | 6..438 | 7..421 | 942 | 46.2 | Plus |
Flo2-PM | 356 | CG32593-PM | 10..346 | 79..421 | 808 | 47.8 | Plus |
Flo2-PG | 340 | CG32593-PG | 32..330 | 117..421 | 703 | 46.2 | Plus |
Flo2-PH | 281 | CG32593-PH | 1..271 | 145..421 | 630 | 45.8 | Plus |
Flo2-PD | 281 | CG32593-PD | 1..271 | 145..421 | 630 | 45.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19457-PA | 430 | GI19457-PA | 1..430 | 1..426 | 2029 | 94.2 | Plus |
Dmoj\GI15205-PA | 429 | GI15205-PA | 9..419 | 18..421 | 907 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11508-PA | 430 | GL11508-PA | 1..430 | 1..426 | 2156 | 96 | Plus |
Dper\GL27073-PA | 425 | GL27073-PA | 5..415 | 18..421 | 915 | 45.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20892-PA | 430 | GA20892-PA | 1..430 | 1..426 | 2156 | 96 | Plus |
Dpse\GA23027-PA | 438 | GA23027-PA | 6..428 | 7..421 | 954 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20133-PA | 430 | GM20133-PA | 1..430 | 1..426 | 2216 | 99.1 | Plus |
Dsec\GM12049-PA | 438 | GM12049-PA | 6..428 | 7..421 | 964 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25610-PA | 430 | GD25610-PA | 1..430 | 1..426 | 2216 | 99.1 | Plus |
Dsim\anon-381MEL-PA | 438 | GD17182-PA | 6..428 | 7..421 | 964 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21208-PA | 430 | GJ21208-PA | 1..430 | 1..426 | 2035 | 94.2 | Plus |
Dvir\GJ16615-PA | 356 | GJ16615-PA | 10..346 | 79..421 | 779 | 46.9 | Plus |
Translation from 209 to 1489
> SD10657.hyp MTWGFVTCGPNEALVVSGCCYMKPLLVPGGRAFVWPVGQQVQRISLNTMT LQVESPCVYTSQGVPISVTGIAQVKVQGQNEDMLLTACEQFLGKSEAEIN HIALVTLEGHQRAIMGSMTVEEIYKDRKKFSKQVFEVASSDLANMGITVV SYTIKDLRDEEGYLRSLGMARTAEVKRDARIGEAEARAEAHIKEAIAEEQ RMAARFLNDTDIAKAQRDFELKKAAYDVEVQTKKAEAEMAYELQAAKTKQ RIKEEQMQVKVIERTQEIAVQEQEIMRRERELEATIRRPAEAEKFRMEKL AEANKQRVVMEAEAEAESIRIRGEAEAFAIAAKAKAEAEQMAMKAEAYRE YREAAMVEMLLDTLPKVAAEVAAPLSQAKKITMVSSGTGDIGAAKLTGEV LSIVNKVPELVKNITGVDIARSVHAG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Flo1-PA | 426 | CG8200-PA | 1..426 | 1..426 | 2099 | 100 | Plus |
Flo1-PB | 430 | CG8200-PB | 1..430 | 1..426 | 2084 | 99.1 | Plus |
Flo2-PB | 425 | CG32593-PB | 6..415 | 7..421 | 961 | 48.7 | Plus |
Flo2-PF | 425 | CG32593-PF | 6..415 | 7..421 | 961 | 48.7 | Plus |
Flo2-PL | 440 | CG32593-PL | 6..415 | 7..421 | 961 | 48.7 | Plus |