BDGP Sequence Production Resources |
Search the DGRC for SD10846
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 108 |
Well: | 46 |
Vector: | pOT2 |
Associated Gene/Transcript | Vps45-RA |
Protein status: | SD10846.pep: gold |
Preliminary Size: | 1725 |
Sequenced Size: | 2018 |
Gene | Date | Evidence |
---|---|---|
CG8228 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8228 | 2002-05-18 | Blastp of sequenced clone |
CG8228 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8228 | 2008-04-29 | Release 5.5 accounting |
CG8228 | 2008-08-15 | Release 5.9 accounting |
CG8228 | 2008-12-18 | 5.12 accounting |
2018 bp (2018 high quality bases) assembled on 2002-05-18
GenBank Submission: AY119186
> SD10846.complete AAAAAACATTAATTTCTGATTTTCGCAGTAAATTAGTTAGCAGTCATGAA TCTGATAAGCGGCATTAAGTTGTACATCGAGAAAATGTGCTCCGAGTCGG GACCGGGCATGAAAATCATTCTGCTGGACAAGGAGACGACCAGTATAATT TCGATGGCCTTTAGCCAATCGGACATGCTGCAACGGGAGGTGTACCTATT TGAGCGCCTGGACTCGGGAAGATCCAACGAGCGGTTAAAGTATCTAAAAT GCATCGTCTTTATACGCCCCACCAAGCAGAACATCCAGCTACTGGCCAAC GAGTTGCGGAACCCCAAATACAGCGCCTACTACATTTATTTCAGCAACAT CATTCCCCGGACGGACATTAAATACTTGGCAGAGTGCGACGAATCCGAAT CGGTGCGAGAAGTGAAGGAACTGTATGCAGACTACCTGTGCGTCAACCCC AATCTGTTCTCATTAGGCATTCCCAATTGCATGGCGAATCTTAATTGGCT GCCGGACGCTCTCAACCGCAGCATGCAGGGCATCACAGCCGTGCTGTTGT CCCTTAAGCTGAACCCAGTGATCCGGTACCGAGCCGGTTCTCAGGCAGCG CAGCTTCTGGCCAAGCTCATATACGAGCAAATCACAAAAGAGTCCTCGCT ATTCGACTTTCGCTCCAACATGGATGGCGCTGCGCCACCGCTGCTGCTTG TGCTGGACCGCAGGGACGATCCTGTGACGCCGCTTTTGCATCAGTGGACA TACCAGGCCATGGTGCATGAGTTGCTGCACATAAAAAACAATCGATTGGA CCTGTCCAATTGCCCCAATGTGCCGAAAGACTTCAAGGAGCTGGTCTTAT CCGGTGATCAGGATGACTTCTATGGCAACAACATGTACGCCAACTACGGC GAAATCGGATCTACCATCAAACAACTGATGGAGGAGTTCCAGCGCAAGGC GAACGACCACAAGAAAGTGGAGAGCATAGCAGACATGAAGAACTTTATTG AGTCATATCCGCAGTTTAAAAAAATGTCTGGCACTGTGCAAAAGCATTTG TGTGTGATTGGAGAACTGTCGGCGCTGAGCAACAAGAGGAATCTCTTCGA GGTTTCCGAACTTGAACAGGAGATCGCTTGCAAGGCGGAGCACTCGGCCC AGCTGCAGAGAATCAAAAAACTAATTGCCGACGAACGGGTTTCCATCGAT GATGCTCTTAAGTTGGTGGCACTTTATGCATTGCGATACGAGCGACACGC CAACTGCGACACATCTGGACTGCTGCAAATAATCAAAACGCGCGGTGGAC GAGCGGCTATAGTGCCATCGTTGATTGAGTATGCTGGAACCCATGTACGA CAAGGAGATCTCTTCAATATGGTGCGGATAACGGACGCCGTAAAGCTGAC ACGGAATTTGATTAAGGGCCTTAAGGGTGTGGAAAATGTCTTCACACAGC ACACTCCTCTCCTGAAGGAAACTTTGGAGGACGTGTTTAAGGGCCGCGAG CTGGATCCCCTCTTCCCGGCCATCAATTCAGAGCTTGTGCCATTTCGACG ACCACCGCAGGAGGTTGTCGTGTTCATTATTGGCGGTGCCACGTACGAGG AAGCCTTAGCGGTGCACCAGTTAAACAACGCCGGCTATAAAGTCATTCTT GGCGGCACCACCATCCATAACTCGCAGAGTTTTATCCAAGAGGTCGTGGC CGCCACTAGTGGCATTCAGTTTAAGCACACCAAATCCATGATCAAGTACT GTTCCACGGATAACATTTAAAGTCTATTTTGACTAGATAGCCCCAATTAT ATTGTTAACTATTTATTAACTAAATATGAATGTGCATTATGTATTAAGGT ATTCCATGCATTGTACCAATTCAAATCCATTGGACTATTTAACCTTTTAA GCGTAACCATGTAAACATATTTATTGTTATTCTCGAGGGTAACACCAGGC AACGCCTTGGACAAAATGTATTATATACAACTATGTGTGTACAAAATTAA AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vps45-RA | 2059 | Vps45-RA | 62..2059 | 1..1998 | 9990 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5390266..5391927 | 338..1998 | 8230 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 5390015..5390214 | 138..337 | 1000 | 100 | Plus |
chr3R | 27901430 | chr3R | 5389815..5389952 | 1..138 | 690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5389815..5389952 | 1..138 | 100 | -> | Plus |
chr3R | 5390016..5390214 | 139..337 | 100 | -> | Plus |
chr3R | 5390266..5391927 | 338..1998 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8228-RA | 1..1725 | 46..1770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vps45-RA | 1..1725 | 46..1770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vps45-RA | 1..1725 | 46..1770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8228-RA | 1..1725 | 46..1770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vps45-RA | 1..1725 | 46..1770 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8228-RA | 1..1998 | 1..1998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vps45-RA | 1..1998 | 1..1998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vps45-RA | 58..2055 | 1..1998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8228-RA | 1..1998 | 1..1998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vps45-RA | 58..2055 | 1..1998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9563981..9564118 | 1..138 | 100 | -> | Plus |
3R | 9564182..9564380 | 139..337 | 100 | -> | Plus |
3R | 9564432..9566092 | 338..1998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9563981..9564118 | 1..138 | 100 | -> | Plus |
3R | 9564182..9564380 | 139..337 | 100 | -> | Plus |
3R | 9564432..9566092 | 338..1998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9563981..9564118 | 1..138 | 100 | -> | Plus |
3R | 9564182..9564380 | 139..337 | 100 | -> | Plus |
3R | 9564432..9566092 | 338..1998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5389703..5389840 | 1..138 | 100 | -> | Plus |
arm_3R | 5389904..5390102 | 139..337 | 100 | -> | Plus |
arm_3R | 5390154..5391814 | 338..1998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9305263..9306923 | 338..1998 | 100 | Plus | |
3R | 9304812..9304949 | 1..138 | 100 | -> | Plus |
3R | 9305013..9305211 | 139..337 | 100 | -> | Plus |
Translation from 45 to 1769
> SD10846.pep MNLISGIKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVY LFERLDSGRSNERLKYLKCIVFIRPTKQNIQLLANELRNPKYSAYYIYFS NIIPRTDIKYLAECDESESVREVKELYADYLCVNPNLFSLGIPNCMANLN WLPDALNRSMQGITAVLLSLKLNPVIRYRAGSQAAQLLAKLIYEQITKES SLFDFRSNMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNNR LDLSNCPNVPKDFKELVLSGDQDDFYGNNMYANYGEIGSTIKQLMEEFQR KANDHKKVESIADMKNFIESYPQFKKMSGTVQKHLCVIGELSALSNKRNL FEVSELEQEIACKAEHSAQLQRIKKLIADERVSIDDALKLVALYALRYER HANCDTSGLLQIIKTRGGRAAIVPSLIEYAGTHVRQGDLFNMVRITDAVK LTRNLIKGLKGVENVFTQHTPLLKETLEDVFKGRELDPLFPAINSELVPF RRPPQEVVVFIIGGATYEEALAVHQLNNAGYKVILGGTTIHNSQSFIQEV VAATSGIQFKHTKSMIKYCSTDNI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18478-PA | 574 | GF18478-PA | 1..574 | 1..574 | 2937 | 94.6 | Plus |
Dana\GF20177-PA | 599 | GF20177-PA | 33..592 | 17..550 | 253 | 20.3 | Plus |
Dana\GF20604-PA | 639 | GF20604-PA | 30..633 | 20..558 | 224 | 22.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16896-PA | 574 | GG16896-PA | 1..574 | 1..574 | 3034 | 98.4 | Plus |
Dere\GG24515-PA | 639 | GG24515-PA | 30..633 | 20..558 | 274 | 22.3 | Plus |
Dere\GG14217-PA | 597 | GG14217-PA | 30..590 | 16..550 | 248 | 20.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19300-PA | 574 | GH19300-PA | 1..574 | 1..574 | 2801 | 92.5 | Plus |
Dgri\GH11497-PA | 638 | GH11497-PA | 30..633 | 20..558 | 257 | 22.4 | Plus |
Dgri\GH17352-PA | 600 | GH17352-PA | 43..593 | 23..550 | 250 | 20.1 | Plus |
Dgri\GH12659-PA | 601 | GH12659-PA | 43..594 | 23..550 | 246 | 20.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vps45-PA | 574 | CG8228-PA | 1..574 | 1..574 | 2937 | 100 | Plus |
Slh-PG | 639 | CG3539-PG | 30..633 | 20..558 | 280 | 22 | Plus |
Slh-PC | 639 | CG3539-PC | 30..633 | 20..558 | 280 | 22 | Plus |
Rop-PB | 597 | CG15811-PB | 36..590 | 19..550 | 256 | 20.6 | Plus |
Rop-PA | 597 | CG15811-PA | 36..590 | 19..550 | 256 | 20.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23516-PA | 574 | GI23516-PA | 1..574 | 1..574 | 2789 | 91.8 | Plus |
Dmoj\GI16994-PA | 639 | GI16994-PA | 30..638 | 20..562 | 262 | 22.6 | Plus |
Dmoj\GI21456-PA | 610 | GI21456-PA | 28..610 | 17..553 | 183 | 21.5 | Plus |
Dmoj\GI21525-PA | 399 | GI21525-PA | 43..392 | 217..550 | 180 | 22.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21496-PA | 490 | GL21496-PA | 15..490 | 99..574 | 2407 | 93.3 | Plus |
Dper\GL26465-PA | 638 | GL26465-PA | 30..638 | 20..564 | 267 | 22.8 | Plus |
Dper\GL15772-PA | 447 | GL15772-PA | 30..440 | 156..550 | 182 | 20.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26299-PA | 574 | GA26299-PA | 1..574 | 1..574 | 2934 | 94.6 | Plus |
Dpse\GA28872-PA | 638 | GA28872-PA | 30..638 | 20..564 | 267 | 22.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23816-PA | 549 | GM23816-PA | 1..549 | 1..574 | 2896 | 94.9 | Plus |
Dsec\GM18223-PA | 639 | GM18223-PA | 30..627 | 20..552 | 269 | 22.3 | Plus |
Dsec\GM14010-PA | 597 | GM14010-PA | 30..590 | 16..550 | 248 | 20.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18625-PA | 564 | GD18625-PA | 1..562 | 1..562 | 3006 | 99.6 | Plus |
Dsim\GD22831-PA | 625 | GD22831-PA | 30..619 | 20..558 | 282 | 22.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10268-PA | 574 | GJ10268-PA | 1..574 | 1..574 | 2779 | 91.5 | Plus |
Dvir\Slh-PA | 638 | GJ24182-PA | 30..633 | 20..558 | 268 | 22.7 | Plus |
Dvir\GJ15999-PA | 589 | GJ15999-PA | 32..582 | 23..550 | 243 | 20.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11253-PA | 574 | GK11253-PA | 1..574 | 1..574 | 2888 | 92.7 | Plus |
Dwil\GK23735-PA | 640 | GK23735-PA | 30..634 | 20..558 | 265 | 22.6 | Plus |
Dwil\GK25120-PA | 599 | GK25120-PA | 38..592 | 19..550 | 249 | 20.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25962-PA | 574 | GE25962-PA | 1..574 | 1..574 | 3048 | 99 | Plus |
Dyak\GE15096-PA | 639 | GE15096-PA | 30..633 | 20..558 | 274 | 22.3 | Plus |
Dyak\GE20645-PA | 597 | GE20645-PA | 30..590 | 16..550 | 248 | 20.8 | Plus |
Translation from 45 to 1769
> SD10846.hyp MNLISGIKLYIEKMCSESGPGMKIILLDKETTSIISMAFSQSDMLQREVY LFERLDSGRSNERLKYLKCIVFIRPTKQNIQLLANELRNPKYSAYYIYFS NIIPRTDIKYLAECDESESVREVKELYADYLCVNPNLFSLGIPNCMANLN WLPDALNRSMQGITAVLLSLKLNPVIRYRAGSQAAQLLAKLIYEQITKES SLFDFRSNMDGAAPPLLLVLDRRDDPVTPLLHQWTYQAMVHELLHIKNNR LDLSNCPNVPKDFKELVLSGDQDDFYGNNMYANYGEIGSTIKQLMEEFQR KANDHKKVESIADMKNFIESYPQFKKMSGTVQKHLCVIGELSALSNKRNL FEVSELEQEIACKAEHSAQLQRIKKLIADERVSIDDALKLVALYALRYER HANCDTSGLLQIIKTRGGRAAIVPSLIEYAGTHVRQGDLFNMVRITDAVK LTRNLIKGLKGVENVFTQHTPLLKETLEDVFKGRELDPLFPAINSELVPF RRPPQEVVVFIIGGATYEEALAVHQLNNAGYKVILGGTTIHNSQSFIQEV VAATSGIQFKHTKSMIKYCSTDNI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vps45-PA | 574 | CG8228-PA | 1..574 | 1..574 | 2937 | 100 | Plus |
Slh-PG | 639 | CG3539-PG | 30..633 | 20..558 | 280 | 22 | Plus |
Slh-PC | 639 | CG3539-PC | 30..633 | 20..558 | 280 | 22 | Plus |
Rop-PB | 597 | CG15811-PB | 36..590 | 19..550 | 256 | 20.6 | Plus |
Rop-PA | 597 | CG15811-PA | 36..590 | 19..550 | 256 | 20.6 | Plus |