BDGP Sequence Production Resources |
Search the DGRC for SD10847
Library: | SD |
Tissue Source: | Drosophila melanogaster Schneider L2 cell culture |
Created by: | Ling Hong |
Date Registered: | 1999-02-25 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 108 |
Well: | 47 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5274-RA |
Protein status: | SD10847.pep: gold |
Preliminary Size: | 1493 |
Sequenced Size: | 1396 |
Gene | Date | Evidence |
---|---|---|
CG5274 | 2001-01-01 | Release 2 assignment |
CG5274 | 2001-07-04 | Blastp of sequenced clone |
CG5274 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5274 | 2008-04-29 | Release 5.5 accounting |
CG5274 | 2008-08-15 | Release 5.9 accounting |
CG5274 | 2008-12-18 | 5.12 accounting |
1396 bp (1396 high quality bases) assembled on 2001-07-04
GenBank Submission: AY052148
> SD10847.complete ACCATACATTCTTAAAAACCTGTCACTGCTTTGTACAAGATAAAGGACTA GAGGATGTCGATGTCGATAGACAGCAATAAGCTCTTGCTCCGGAAGGGCG ATATGAAGCTGGATAATTATCCAACTTGTGCGGTGGAGGCACTTACGCGA CTGGAAACATTGATTGCCAGCAGGAACAAGCAAAACATGGTGATGCAAAT TATATCGGAGTTCATATTCCTGGAAAGAACCCCGAAGGATGGCGACGTGC GAAAGTCGCAGGCGCTGCCCATTAGCCAGATGAATCTGTTCCAGGAGTTC CAGCTGATCATAGCGCTGATTGAGTACTTTTCGCGACCAGGAAGAGATGC CACCCGCAACGCCATATTCCTGTCGCTCTTCGGAAGCCACTTGACACCGC AGCGATCCAAGTTGTTGTCCCGGCTGATCAGCACAGCAGTTTCCGGCTCC GTGGCCCCGCTGCTCTCCTCTGCCGGCACATGGATGCAACAGGTGGGGTG CAAGACGCCACTCAGCCTGGAAGTGGCCCAAAATATAGTCAGCGACTTTA TCTCGTACTCCCGGAAAACCCCCGAGCAACTCAAGCAGCTGCCCATGGTG GGTCCGCACTTTGCGGCCAACTTTATGGTCGCCGTGGCGGATCTGTACCT CAATGAGCAGCGTTCGCCGACATTGAATCCACCGCCAGATGCTCTGCTGG ACACCATAACCGAATGGATGATGGAGAATCCCACTTTGTGTCAGGCCTCG CAGCAGCCTTTGGTCCTGCCCGCCGGAGCCATAGCCATGCCCTTTACCAC TCCCCTAGCAGGCCTGCTTCGATGGGTGGTCCTGGCGCCGTTGGTCTCCA ACCGTTCCGCCTATAGCAATTTGCATCTATCCCTCCTGCGTGCTCTGCAA CAGCTTGTCAGCAGTGGGGAATCGACAGCGCTGCCCAGTCAAGATCTTAT GCAGATCGTGAAATCCCTGCAGAGCTACTGCGCACGGCTGGCGGAATCAA AAACCGATCCCCAAGCGGATGCCGCATATCAGAAGTGCATGGAACGCTTC GCCCAAGCAGTGCAAATCGCCCTGAGCTCCAACTGCATCACCAATCAGAT CCAGCTGCTGTGCCTCTTGGAATCTTTACCTCCACACAAGCTGATGAAAA TCGTCATAGAGGCGCACAAGAAGTAGTTAAATATCAAACACTATAAACGT CAGTCGGTTAATGCGAGTAATTAATCATTAAAATTAAAATGTAGCTTTTA CAAATAGATCTAAGACGTTATTAATTAAACATTGAGTCGCTTACAAATCT TTTAAGCCCAAAAATGTTTGTTTGGTTAAAAGAAGAAAGGGTTTAACTAT ATTAAAAAACAACAATTTATACCGAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 6400..6515 | 1208..1317 | 122 | 66.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20415205..20416424 | 155..1374 | 99 | <- | Minus |
chr3L | 20416477..20416630 | 1..154 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5274-RA | 1..1122 | 55..1176 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5274-RA | 1..1122 | 55..1176 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5274-RB | 1..1122 | 55..1176 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5274-RA | 1..1122 | 55..1176 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5274-RB | 1..1122 | 55..1176 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5274-RA | 1..1374 | 1..1374 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5274-RA | 1..1374 | 1..1374 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5274-RA | 1..1374 | 1..1374 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5274-RA | 1..1374 | 1..1374 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5274-RA | 1..1374 | 1..1374 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20426199..20427418 | 155..1374 | 99 | <- | Minus |
3L | 20427471..20427624 | 1..154 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20426199..20427418 | 155..1374 | 99 | <- | Minus |
3L | 20427471..20427624 | 1..154 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20426199..20427418 | 155..1374 | 99 | <- | Minus |
3L | 20427471..20427624 | 1..154 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20420571..20420724 | 1..154 | 99 | Minus | |
arm_3L | 20419299..20420518 | 155..1374 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20419299..20420518 | 155..1374 | 99 | <- | Minus |
3L | 20420571..20420724 | 1..154 | 99 | Minus |
Translation from 54 to 1175
> SD10847.pep MSMSIDSNKLLLRKGDMKLDNYPTCAVEALTRLETLIASRNKQNMVMQII SEFIFLERTPKDGDVRKSQALPISQMNLFQEFQLIIALIEYFSRPGRDAT RNAIFLSLFGSHLTPQRSKLLSRLISTAVSGSVAPLLSSAGTWMQQVGCK TPLSLEVAQNIVSDFISYSRKTPEQLKQLPMVGPHFAANFMVAVADLYLN EQRSPTLNPPPDALLDTITEWMMENPTLCQASQQPLVLPAGAIAMPFTTP LAGLLRWVVLAPLVSNRSAYSNLHLSLLRALQQLVSSGESTALPSQDLMQ IVKSLQSYCARLAESKTDPQADAAYQKCMERFAQAVQIALSSNCITNQIQ LLCLLESLPPHKLMKIVIEAHKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24136-PA | 373 | GF24136-PA | 1..373 | 1..373 | 1757 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13314-PA | 373 | GG13314-PA | 1..373 | 1..373 | 1860 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16748-PA | 355 | GH16748-PA | 1..354 | 3..373 | 1405 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5274-PA | 373 | CG5274-PA | 1..373 | 1..373 | 1874 | 100 | Plus |
CG5274-PB | 373 | CG5274-PB | 1..373 | 1..373 | 1874 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13473-PA | 368 | GI13473-PA | 3..367 | 4..373 | 1493 | 80.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19778-PA | 306 | GL19778-PA | 7..305 | 74..373 | 888 | 58.8 | Plus |
Dper\GL11907-PA | 59 | GL11907-PA | 1..58 | 1..58 | 229 | 74.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18778-PA | 373 | GA18778-PA | 1..372 | 1..373 | 1706 | 86.3 | Plus |
Dpse\GA27109-PA | 367 | GA27109-PA | 17..366 | 16..373 | 1026 | 57.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22217-PA | 373 | GM22217-PA | 1..373 | 1..373 | 1937 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12189-PA | 364 | GD12189-PA | 1..364 | 1..373 | 1878 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11836-PA | 368 | GJ11836-PA | 3..367 | 4..373 | 1504 | 80.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20437-PA | 367 | GK20437-PA | 1..366 | 1..373 | 1486 | 79.1 | Plus |
Translation from 54 to 1175
> SD10847.hyp MSMSIDSNKLLLRKGDMKLDNYPTCAVEALTRLETLIASRNKQNMVMQII SEFIFLERTPKDGDVRKSQALPISQMNLFQEFQLIIALIEYFSRPGRDAT RNAIFLSLFGSHLTPQRSKLLSRLISTAVSGSVAPLLSSAGTWMQQVGCK TPLSLEVAQNIVSDFISYSRKTPEQLKQLPMVGPHFAANFMVAVADLYLN EQRSPTLNPPPDALLDTITEWMMENPTLCQASQQPLVLPAGAIAMPFTTP LAGLLRWVVLAPLVSNRSAYSNLHLSLLRALQQLVSSGESTALPSQDLMQ IVKSLQSYCARLAESKTDPQADAAYQKCMERFAQAVQIALSSNCITNQIQ LLCLLESLPPHKLMKIVIEAHKK*