SD10928.complete Sequence
2239 bp (2239 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061632
> SD10928.complete
AGAGTGCCCAGTGCCATTAGTCATTGCTATTACGCCATAAGTAAGCCCAA
ACAATAATACCCAGCTGTCGAGATTAAGCACAGCATAATCAGCCCAAAAA
CACAGCTGGTCGAGGTGACAAGAATATATGTATATAGAGCAGGGAAAACA
GTCGAATCGAATCTGAACTTTGCTCCCGATTTTCGCCCATATCAGCGTGA
GCTTGCAGAATCTCGGCATTCGCATTCTATATTTGTATCCCTGCATCCGA
AACTCGCAGCAGATCGTTGTGAAATCGTACACATAGTCGATATATAGCGC
AGTAATGGCTGGCCGCTCCATCGTCCACTTTTTTCTGGGGTCCGTGGCAA
TCGCCCTGGGATCGTACATCTACTTCACCATGCAAGTAATTACCCATAAC
ACTAACTATCCCTTCAAATTGCTGTCCAATCAACTCGAACAATGGCTTGC
ATGTGCAATGAGCGACGGTAACGAGGCAGCGTCGTGGGTAACGTGGGCCA
ATCCTGGCCAGCTTAAAGGTCACTGTGCGTAGCCACTAGGTTGCGTGACT
CACAGGGTGCTGGGATATACATATACGGAGTTATGTACATATAGCTCTCG
ACTTTGAACCCGATGAATTATGCAGCGTCACTGTAACCAGAAGCCTGATA
TCACCCTCGTAAATGTCTATGAAACAACATACAACTATTAGGAAACCCAT
TATCAAAACGTGAAATAATCTTGGATGTTTGTCGTCGGGTTGTCGAATAC
AATCTATACACCACATACATTTGCACACTTTCTTATTCGGAAATAAGATA
GCTTTGAGCTATCTTACTACTTTACTTACTACTTGCTCTTATCTACTTAA
CTATTTCGTTAATCAGTAGAAATGTGGATTTGATTTTTATATTTTCCCAT
TGAATTGTTTTGAAACGATTGTTGTTCGATCTGATACACAACGTACACAT
CCACACCAGTAATTCCTTGACTTGCCTAAGCTTTCACTAAATTTGAACAT
TCTGCCCGGTTATTATTTGCAGCATTTAAAGAATGAGTCTCAGGCAGTTT
CAGAACATTTCCCGCCAGGCCCTCAGGTGCTACTCGATGAGGCGGACTCT
GGGCCCCGTCCTCGAGCTGAGTCGCGGTCAGAGGCAGTGCCTTCGCCTCT
GCACCGTCATGCTTCCCGTGAGCTGTGCGGCCACGCCCATGAACGCCATC
TCCTCAGCCGCCCAGCACTCCACAGCAGCTGCCGTGAGTAGTGCTGATTG
CTAGTTGACTAGATCCTAACCCGTTGACTAACTCAGTTGCTGCGCCTTAC
TAAACGTTGTAGCGTTTGCCACTGCCTGTGTTCTCTGTTCTCCGTTGCCT
GTTCACTGCAATGAACCGCCTAGACTGGGTCGATTTTGATACAGAATATA
GTGTTTCATACCCCGATTGAAGATAAGGCTATATCTATATCTCTTGATCA
AAACATCGACCCAAGCCTTCACAGCCACTAGTAATTATCCAATTGTAACT
CCCACTTTCTATTGCTTCCAGATCGACATGTCTGCTAACGGAGATTACAA
GAACGCCGCCTCGATCTACGAGTTCACCGTGAAGGATACCCATGGCAACG
ATGTTTCCCTGGAAAAGTACAAGGGCAAGGTGGTCCTGGTGGTGAACATC
GCCTCCAAGTGCGGCCTGACCAAGAACAACTACGAGAAGCTGACGGATCT
AAAGGAGAAGTACGGCGAGCGCGGCCTGGTGATCCTCAACTTCCCGTGCA
ATCAGTTTGGGTCCCAGATGCCGGAGGCCGATGGAGAGGCCATGGTGTGC
CACCTGCGCGACTCCAAGGCTGACATCGGCGAGGTGTTCGCCAAGGTCGA
TGTGAATGGAGACAATGCGGCGCCGCTGTACAAATACCTAAAGGCCAAGC
AGACCGGCACCCTGGGCAGCGGAATCAAGTGGAACTTCACCAAGTTTCTG
GTGAACAAGGAGGGCGTGCCCATCAACCGATATGCCCCGACCACCGATCC
CATGGACATCGCCAAGGACATTGAAAAGCTGCTGTAGATGTGCCCTAGAC
GTTAGCTGCTCTTTTGGACTGTGTTTTCGCGTAGCTTTAGCTTGTAACCG
TCTGGCCACAGATAGTCTTGTGGCCGGCCACATGCACCGCATGGTATATA
TATTGTCTACTCCTTACTGGTTTTGATTCCCACCCGCAAACATAATAAAC
GCCATTCGTGGTTACCACACTAAAAAAAAAAAAAAAAAA
SD10928.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:03:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PHGPx-RC | 1212 | PHGPx-RC | 464..1164 | 1522..2222 | 3505 | 100 | Plus |
PHGPx-RD | 1078 | PHGPx-RD | 330..1030 | 1522..2222 | 3505 | 100 | Plus |
PHGPx-RA | 867 | PHGPx-RA | 119..819 | 1522..2222 | 3505 | 100 | Plus |
PHGPx-RC | 1212 | PHGPx-RC | 81..463 | 3..385 | 1885 | 99.4 | Plus |
PHGPx-RD | 1078 | PHGPx-RD | 119..329 | 1023..1233 | 995 | 98.1 | Plus |
PHGPx-RD | 1078 | PHGPx-RD | 81..118 | 3..40 | 175 | 97.3 | Plus |
PHGPx-RA | 867 | PHGPx-RA | 81..118 | 3..40 | 175 | 97.3 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:10:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 3325739..3327592 | 3..1847 | 8835 | 98.8 | Plus |
chr3L | 24539361 | chr3L | 3327656..3328033 | 1844..2221 | 1875 | 99.7 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 21:54:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:10:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3326330..3328185 | 3..1847 | 8395 | 97.3 | Plus |
3L | 28110227 | 3L | 3328249..3328627 | 1844..2222 | 1895 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:28:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 3326901..3327611 | 582..1291 | 3365 | 98.4 | Plus |
3L | 28103327 | 3L | 3326330..3326902 | 3..575 | 2775 | 98.9 | Plus |
3L | 28103327 | 3L | 3327663..3328185 | 1329..1847 | 2455 | 98.2 | Plus |
3L | 28103327 | 3L | 3328249..3328627 | 1844..2222 | 1895 | 100 | Plus |
3L | 28103327 | 3L | 3327617..3327767 | 1290..1433 | 550 | 92 | Plus |
Blast to na_te.dros performed on 2019-03-16 15:10:10 has no hits.
SD10928.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:10:57 Download gff for
SD10928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 3325737..3327590 | 1..1845 | 97 | -> | Plus |
chr3L | 3327658..3328033 | 1846..2221 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed on 2008-12-08 21:06:52 has no hits.
Sim4 to dmel-all-CDS-r5.32.fasta performed on 2011-03-16 19:38:02 has no hits.
Sim4 to dmel-all-CDS-r5.52.fasta performed on 2013-08-04 16:05:31 has no hits.
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 20:06:58 has no hits.
Sim4 to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 11:37:18 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2008-11-10 23:18:59 has no hits.
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 19:38:01 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 16:05:31 has no hits.
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:06:58 Download gff for
SD10928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PHGPx-RB | 38..2269 | 1..2221 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 11:37:18 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:10:57 Download gff for
SD10928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3326328..3328183 | 1..1845 | 97 | -> | Plus |
3L | 3328251..3328626 | 1846..2221 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:10:57 Download gff for
SD10928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3326328..3328183 | 1..1845 | 97 | -> | Plus |
3L | 3328251..3328626 | 1846..2221 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:10:57 Download gff for
SD10928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3326328..3328183 | 1..1845 | 97 | -> | Plus |
3L | 3328251..3328626 | 1846..2221 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:31 Download gff for
SD10928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3326328..3328183 | 1..1845 | 97 | -> | Plus |
arm_3L | 3328251..3328626 | 1846..2221 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:42:59 Download gff for
SD10928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3326328..3328183 | 1..1845 | 97 | -> | Plus |
3L | 3328251..3328626 | 1846..2221 | 100 | | Plus |
SD10928.pep Sequence
Translation from 1527 to 2036
> SD10928.pep
MSANGDYKNAASIYEFTVKDTHGNDVSLEKYKGKVVLVVNIASKCGLTKN
NYEKLTDLKEKYGERGLVILNFPCNQFGSQMPEADGEAMVCHLRDSKADI
GEVFAKVDVNGDNAAPLYKYLKAKQTGTLGSGIKWNFTKFLVNKEGVPIN
RYAPTTDPMDIAKDIEKLL*
SD10928.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:40:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF10532-PA | 240 | GF10532-PA | 74..240 | 3..169 | 872 | 95.2 | Plus |
Dana\GF13732-PA | 195 | GF13732-PA | 40..191 | 13..169 | 451 | 53.5 | Plus |
Dana\GF20161-PA | 187 | GF20161-PA | 5..103 | 32..169 | 367 | 58 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:40:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG15132-PA | 265 | GG15132-PA | 97..265 | 1..169 | 902 | 98.2 | Plus |
Dere\GG20925-PA | 193 | GG20925-PA | 33..191 | 6..169 | 432 | 51.8 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:40:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH15953-PA | 245 | GH15953-PA | 79..245 | 3..169 | 872 | 95.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PHGPx-PA | 169 | CG12013-PA | 1..169 | 1..169 | 887 | 100 | Plus |
PHGPx-PC | 198 | CG12013-PC | 30..198 | 1..169 | 887 | 100 | Plus |
PHGPx-PD | 238 | CG12013-PD | 70..238 | 1..169 | 887 | 100 | Plus |
CG15116-PA | 193 | CG15116-PA | 33..191 | 6..169 | 403 | 50.6 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:40:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI16605-PA | 213 | GI16605-PA | 47..213 | 3..169 | 857 | 93.4 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:40:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL16141-PA | 238 | GL16141-PA | 70..238 | 1..169 | 853 | 89.9 | Plus |
Dper\GL10571-PA | 201 | GL10571-PA | 37..196 | 10..169 | 460 | 53.1 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:40:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA11336-PA | 238 | GA11336-PA | 70..238 | 1..169 | 853 | 89.9 | Plus |
Dpse\GA13504-PA | 201 | GA13504-PA | 37..196 | 10..169 | 463 | 53.1 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:40:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM14565-PA | 253 | GM14565-PA | 85..253 | 1..169 | 900 | 98.8 | Plus |
Dsec\GM19853-PA | 193 | GM19853-PA | 33..191 | 6..169 | 423 | 50 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:40:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD13757-PA | 196 | GD13757-PA | 85..190 | 1..106 | 565 | 98.1 | Plus |
Dsim\GD25340-PA | 193 | GD25340-PA | 33..191 | 6..169 | 425 | 50.6 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:40:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ12858-PA | 244 | GJ12858-PA | 78..244 | 3..169 | 863 | 94.6 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:40:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK20508-PA | 254 | GK20508-PA | 86..254 | 1..169 | 846 | 90.5 | Plus |
Dwil\GK19311-PA | 194 | GK19311-PA | 39..190 | 12..169 | 431 | 51.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:40:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE21358-PA | 265 | GE21358-PA | 97..265 | 1..169 | 899 | 97.6 | Plus |
Dyak\GE13862-PA | 193 | GE13862-PA | 39..191 | 12..169 | 435 | 52.5 | Plus |
SD10928.hyp Sequence
Translation from 1527 to 2036
> SD10928.hyp
MSANGDYKNAASIYEFTVKDTHGNDVSLEKYKGKVVLVVNIASKCGLTKN
NYEKLTDLKEKYGERGLVILNFPCNQFGSQMPEADGEAMVCHLRDSKADI
GEVFAKVDVNGDNAAPLYKYLKAKQTGTLGSGIKWNFTKFLVNKEGVPIN
RYAPTTDPMDIAKDIEKLL*
SD10928.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:45:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PHGPx-PA | 169 | CG12013-PA | 1..169 | 1..169 | 887 | 100 | Plus |
PHGPx-PC | 198 | CG12013-PC | 30..198 | 1..169 | 887 | 100 | Plus |
PHGPx-PD | 238 | CG12013-PD | 70..238 | 1..169 | 887 | 100 | Plus |
CG15116-PA | 193 | CG15116-PA | 33..191 | 6..169 | 403 | 50.6 | Plus |